The Phyre2 web portal for protein modeling, prediction and analysis
Published 2015 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
The Phyre2 web portal for protein modeling, prediction and analysis
Authors
Keywords
-
Journal
Nature Protocols
Volume 10, Issue 6, Pages 845-858
Publisher
Springer Nature
Online
2015-05-07
DOI
10.1038/nprot.2015.053
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- SuSPect: Enhanced Prediction of Single Amino Acid Variant (SAV) Phenotype Using Network Features
- (2014) Christopher M. Yates et al. JOURNAL OF MOLECULAR BIOLOGY
- Critical assessment of methods of protein structure prediction (CASP) - round x
- (2013) John Moult et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Improved model quality assessment using ProQ2
- (2012) Arjun Ray et al. BMC BIOINFORMATICS
- Template-based protein structure modeling using the RaptorX web server
- (2012) Morten Källberg et al. Nature Protocols
- Genome3D: a UK collaborative project to annotate genomic sequences with predicted 3D structures based on SCOP and CATH domains
- (2012) Tony E. Lewis et al. NUCLEIC ACIDS RESEARCH
- CDD: conserved domains and protein three-dimensional structure
- (2012) Aron Marchler-Bauer et al. NUCLEIC ACIDS RESEARCH
- Improving the Assessment of the Outcome of Nonsynonymous SNVs with a Consensus Deleteriousness Score, Condel
- (2011) Abel González-Pérez et al. AMERICAN JOURNAL OF HUMAN GENETICS
- HHblits: lightning-fast iterative protein sequence searching by HMM-HMM alignment
- (2011) Michael Remmert et al. NATURE METHODS
- ePlant and the 3D Data Display Initiative: Integrative Systems Biology on the World Wide Web
- (2011) Geoffrey Fucile et al. PLoS One
- Protein Folding Requires Crowd Control in a Simulated Cell
- (2010) Benjamin R. Jefferys et al. JOURNAL OF MOLECULAR BIOLOGY
- A method and server for predicting damaging missense mutations
- (2010) Ivan A Adzhubei et al. NATURE METHODS
- I-TASSER: a unified platform for automated protein structure and function prediction
- (2010) Ambrish Roy et al. Nature Protocols
- fpocket: online tools for protein ensemble pocket detection and tracking
- (2010) P. Schmidtke et al. NUCLEIC ACIDS RESEARCH
- 3DLigandSite: predicting ligand-binding sites using similar structures
- (2010) Mark N. Wass et al. NUCLEIC ACIDS RESEARCH
- pGenTHREADER and pDomTHREADER: new methods for improved protein fold recognition and superfamily discrimination
- (2009) Anna Lobley et al. BIOINFORMATICS
- Protein structure prediction on the Web: a case study using the Phyre server
- (2009) Lawrence A Kelley et al. Nature Protocols
- Structure prediction for CASP8 with all-atom refinement using Rosetta
- (2009) Srivatsan Raman et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Fast procedure for reconstruction of full-atom protein models from reduced representations
- (2008) Piotr Rotkiewicz et al. JOURNAL OF COMPUTATIONAL CHEMISTRY
- PiSite: a database of protein interaction sites using multiple binding states in the PDB
- (2008) M. Higurashi et al. NUCLEIC ACIDS RESEARCH
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now