Nitrate Storage and Dissimilatory Nitrate Reduction by Eukaryotic Microbes

A redox-stratified ocean 3.2 billion years ago

(2015) Aaron M. Satkoski et al.   EARTH AND PLANETARY SCIENCE LETTERS

Aerobic and anaerobic nitrogen transformation processes in N2-fixing cyanobacterial aggregates

(2015) Isabell Klawonn et al.   ISME Journal

Variation in the nitrogen isotopic composition of amino acids in benthic foraminifera: Implications for their adaptation to oxygen-depleted environments

(2015) Hidetaka Nomaki et al.   LIMNOLOGY AND OCEANOGRAPHY

Mosaic nature of the mitochondrial proteome: Implications for the origin and evolution of mitochondria

(2015) Michael W. Gray   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Rethinking the marine carbon cycle: Factoring in the multifarious lifestyles of microbes

(2015) A. Z. Worden et al.   SCIENCE

Phylogenetic, taxonomic and functional diversity of fungal denitrifiers and associated N2O production efficacy

(2015) Nape Mothapo et al.   SOIL BIOLOGY & BIOCHEMISTRY

Development of PCR primers targeting fungal nirK to study fungal denitrification in the environment

(2015) Wei Wei et al.   SOIL BIOLOGY & BIOCHEMISTRY

N2O production, a widespread trait in fungi

(2015) Koki Maeda et al.   Scientific Reports

Kinetic exploration of nitrate-accumulating microalgae for nutrient recovery

(2014) Joeri Coppens et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Dissimilatory nitrate reduction by Aspergillus terreus isolated from the seasonal oxygen minimum zone in the Arabian Sea

(2014) Peter Stief et al.   BMC MICROBIOLOGY

Nitrate uptake by foraminifera and use in conjunction with endobionts under anoxic conditions

(2014) Hidetaka Nomaki et al.   LIMNOLOGY AND OCEANOGRAPHY

The rise of oxygen in Earth’s early ocean and atmosphere

(2014) Timothy W. Lyons et al.   NATURE

Nitrate Reduction Functional Genes and Nitrate Reduction Potentials Persist in Deeper Estuarine Sediments. Why?

(2014) Sokratis Papaspyrou et al.   PLoS One

The Fate of Nitrate in Intertidal Permeable Sediments

(2014) Hannah K. Marchant et al.   PLoS One

The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): Illuminating the Functional Diversity of Eukaryotic Life in the Oceans through Transcriptome Sequencing

(2014) Patrick J. Keeling et al.   PLOS BIOLOGY

Benthic protists and fungi of Mediterranean deep hypsersaline anoxic basin redoxcline sediments

(2014) Joan M. Bernhard et al.   Frontiers in Microbiology

Microbial eukaryote diversity in the marine oxygen minimum zone off northern Chile

(2014) Darren J. Parris et al.   Frontiers in Microbiology

The significant contribution of fungi to soil N2O production across diverse ecosystems

(2013) Huaihai Chen et al.   APPLIED SOIL ECOLOGY

Nitrogen, phosphorus and silicon uptake kinetics by marine diatom Chaetoceros calcitrans under high nutrient concentrations

(2013) Chayarat Tantanasarit et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

Dating the Diversification of the Major Lineages of Ascomycota (Fungi)

(2013) María Prieto et al.   PLoS One

Role of Diatoms in the Spatial-Temporal Distribution of Intracellular Nitrate in Intertidal Sediment

(2013) Peter Stief et al.   PLoS One

Response of the Ubiquitous Pelagic Diatom Thalassiosira weissflogii to Darkness and Anoxia

(2013) Anja Kamp et al.   PLoS One

Benthic mineralization and solute exchange on a Celtic Sea sand-bank (Jones Bank)

(2013) Morten Larsen et al.   PROGRESS IN OCEANOGRAPHY

Nitrous oxide producing activity of diverse fungi from distinct agroecosystems

(2013) Nape V. Mothapo et al.   SOIL BIOLOGY & BIOCHEMISTRY

Chloroplast-mitochondria cross-talk in diatoms

(2012) J. Prihoda et al.   JOURNAL OF EXPERIMENTAL BOTANY

Potential importance of physiologically diverse benthic foraminifera in sedimentary nitrate storage and respiration

(2012) Joan M. Bernhard et al.   JOURNAL OF GEOPHYSICAL RESEARCH

Biochemistry and Evolution of Anaerobic Energy Metabolism in Eukaryotes

(2012) M. Muller et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Deep relationships of Rhizaria revealed by phylogenomics: A farewell to Haeckel’s Radiolaria

(2012) Roberto Sierra et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Fungal denitrification and nitric oxide reductase cytochrome P450nor

(2012) H. Shoun et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

New Pathways and Processes in the Global Nitrogen Cycle

(2011) Bo Thamdrup   Annual Review of Ecology Evolution and Systematics

Mitochondria and the Rise of Eukaryotes

(2011) Mark van der Giezen   BIOSCIENCE

Denitrification in anoxic sediments supported by biological nitrate transport

(2011) M.G. Prokopenko et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Denitrification likely catalyzed by endobionts in an allogromiid foraminifer

(2011) Joan M Bernhard et al.   ISME Journal

Accessing marine protists from the anoxic Cariaco Basin

(2011) V Edgcomb et al.   ISME Journal

Microbial nitrate respiration – Genes, enzymes and environmental distribution

(2011) Beate Kraft et al.   JOURNAL OF BIOTECHNOLOGY

Nitrogen cycling in a deep ocean margin sediment (Sagami Bay, Japan)

(2011) Ronnie N. Glud et al.   LIMNOLOGY AND OCEANOGRAPHY

Indirect control of the intracellular nitrate pool of intertidal sediment by the polychaete Hediste diversicolor

(2011) IM Heisterkamp et al.   MARINE ECOLOGY PROGRESS SERIES

Bayesian relaxed clock estimation of divergence times in foraminifera

(2011) Mathieu Groussin et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Diatoms respire nitrate to survive dark and anoxic conditions

(2011) A. Kamp et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Hundred years of genetic structure in a sediment revived diatom population

(2011) K. Harnstrom et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Possible Involvement of Copper-Containing Nitrite Reductase (NirK) and Flavohemoglobin in Denitrification by the FungusCylindrocarpon tonkinense

(2010) Sang-Wan KIM et al.   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

Evolution of Rhizaria: new insights from phylogenomic analysis of uncultivated protists

(2010) Fabien Burki et al.   BMC EVOLUTIONARY BIOLOGY

Vertical migration, nitrate uptake and denitrification: survival mechanisms of foraminifers (Globobulimina turgida) under low oxygen conditions

(2010) Karoliina A. Koho et al.   FEMS MICROBIOLOGY ECOLOGY

Distribution, ecology and molecular identification of Thioploca from Danish brackish water sediments

(2010) Signe Høgslund et al.   FEMS MICROBIOLOGY ECOLOGY

Nitrous oxide production by the ectomycorrhizal fungi Paxillus involutus and Tylospora fibrillosa

(2010) Miranda T. Prendergast-Miller et al.   FEMS MICROBIOLOGY LETTERS

Oxygen respiration rates of benthic foraminifera as measured with oxygen microsensors

(2010) E. Geslin et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

Survival and life strategy of the foraminiferan Globobulimina turgida through nitrate storage and denitrification

(2010) E Piña-Ochoa et al.   MARINE ECOLOGY PROGRESS SERIES

Freeze-lysable inorganic nutrients in intertidal sediments: dependence on microphytobenthos abundance

(2010) E García-Robledo et al.   MARINE ECOLOGY PROGRESS SERIES

Biodiversity and distribution of the genus Gromia (Protista, Rhizaria) in the deep Weddell Sea (Southern Ocean)

(2010) Nina Rothe et al.   POLAR BIOLOGY

The Evolution and Future of Earth’s Nitrogen Cycle

(2010) Donald E. Canfield et al.   SCIENCE

Bacterial/Fungal Interactions: From Pathogens to Mutualistic Endosymbionts

(2009) Donald Y. Kobayashi et al.   Annual Review of Phytopathology

Eukaryotic nirK Genes Encoding Copper-Containing Nitrite Reductase: Originating from the Protomitochondrion?

(2009) S.-W. Kim et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Response to Hypoxia, Reduction of Electron Acceptors, and Subsequent Survival by Filamentous Fungi

(2009) Naoki TAKAYA   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

Massively parallel tag sequencing reveals the complexity of anaerobic marine protistan communities

(2009) Thorsten Stoeck et al.   BMC BIOLOGY

Large organic-walled Protista (Gromia) in the Arabian Sea: Density, diversity, distribution and ecology

(2009) A. Aranda da Silva et al.   DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY

Fungi evolved right on track

(2009) Robert Lücking et al.   MYCOLOGIA

The life of diatoms in the world's oceans

(2009) E. Virginia Armbrust   NATURE

Widespread occurrence of nitrate storage and denitrification among Foraminifera and Gromiida

(2009) E. Pina-Ochoa et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Giant Deep-Sea Protist Produces Bilaterian-like Traces

(2008) Mikhail V. Matz et al.   CURRENT BIOLOGY

Denitrification, nitrate turnover, and aerobic respiration by benthic foraminiferans in the oxygen minimum zone off Chile

(2008) Signe Høgslund et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

The Phaeodactylum genome reveals the evolutionary history of diatom genomes

(2008) Chris Bowler et al.   NATURE

Energy metabolism among eukaryotic anaerobes in light of Proterozoic ocean chemistry

(2008) M. Mentel et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Ferruginous Conditions Dominated Later Neoproterozoic Deep-Water Chemistry

(2008) D. E. Canfield et al.   SCIENCE