MicroRNA858-mediated regulation of anthocyanin biosynthesis in kiwifruit (Actinidia arguta) based on small RNA sequencing

A key structural gene, AaLDOX , is involved in anthocyanin biosynthesis in all red-fleshed kiwifruit ( Actinidia arguta ) based on transcriptome analysis

(2018) Yukuo Li et al.   GENE

Combined Analysis of the Fruit Metabolome and Transcriptome Reveals Candidate Genes Involved in Flavonoid Biosynthesis in Actinidia arguta

(2018) Yukuo Li et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Expression Differences of Pigment Structural Genes and Transcription Factors Explain Flesh Coloration in Three Contrasting Kiwifruit Cultivars

(2017) Yanfei Liu et al.   Frontiers in Plant Science

Small RNA-Sequencing Links Physiological Changes and RdDM Process to Vegetative-to-Floral Transition in Apple

(2017) Xinwei Guo et al.   Frontiers in Plant Science

Network analysis of the metabolome and transcriptome reveals novel regulation of potato pigmentation

(2016) Kyoungwon Cho et al.   JOURNAL OF EXPERIMENTAL BOTANY

Repression of MYBL2 by Both microRNA858a and HY5 Leads to the Activation of Anthocyanin Biosynthetic Pathway in Arabidopsis

(2016) Yulong Wang et al.   Molecular Plant

Dietary flavonoid intake, total antioxidant capacity and lipid oxidative damage: A cross-sectional study of Iranian women

(2016) Beitolah Alipour et al.   NUTRITION

Identification of Known and Novel microRNAs and Their Targets in Peach (Prunus persica) Fruit by High-Throughput Sequencing

(2016) Chunhua Zhang et al.   PLoS One

Identification and characterization of microRNAs from Chinese pollination constant non-astringent persimmon using high-throughput sequencing

(2015) Yujie Luo et al.   BMC PLANT BIOLOGY

High-density interspecific genetic maps of kiwifruit and the identification of sex-specific markers

(2015) Qiong Zhang et al.   DNA RESEARCH

In the Solanaceae, a hierarchy of bHLHs confer distinct target specificity to the anthocyanin regulatory complex

(2015) Mirco Montefiori et al.   JOURNAL OF EXPERIMENTAL BOTANY

Transcriptome analysis of an apple (Malus×domestica) yellow fruit somatic mutation identifies a gene network module highly associated with anthocyanin and epigenetic regulation

(2015) Islam El-Sharkawy et al.   JOURNAL OF EXPERIMENTAL BOTANY

Small RNA and degradome sequencing reveals microRNAs and their targets involved in tomato pedicel abscission

(2015) Tao Xu et al.   PLANTA

Small tandem target mimic-mediated blockage of microRNA858 induces anthocyanin accumulation in tomato

(2015) Xiaoyun Jia et al.   PLANTA

Transcriptional control of flavonoid biosynthesis by MYB–bHLH–WDR complexes

(2015) Wenjia Xu et al.   TRENDS IN PLANT SCIENCE

Gene Expression Profiling of Development and Anthocyanin Accumulation in Kiwifruit (Actinidia chinensis) Based on Transcriptome Sequencing

(2015) Wenbin Li et al.   PLoS One

Tuning LeSPL-CNR expression by SlymiR157 affects tomato fruit ripening

(2015) Weiwei Chen et al.   Scientific Reports

Identification of miRNAs involved in pear fruit development and quality

(2014) Jun Wu et al.   BMC GENOMICS

High-temperature inhibition of biosynthesis and transportation of anthocyanins results in the poor red coloration in red-fleshedActinidia chinensis

(2014) Yu-Ping Man et al.   PHYSIOLOGIA PLANTARUM

MicroRNA408 Is Critical for theHY5-SPL7Gene Network That Mediates the Coordinated Response to Light and Copper

(2014) Huiyong Zhang et al.   PLANT CELL

Not all anthocyanins are born equal: distinct patterns induced by stress in Arabidopsis

(2014) Nik Kovinich et al.   PLANTA

Transcriptional regulation of secondary metabolite biosynthesis in plants

(2013) Barunava Patra et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

An R2R3 MYB transcription factor determines red petal colour in an Actinidia (kiwifruit) hybrid population

(2013) Lena G Fraser et al.   BMC GENOMICS

Cloning and characterization of a potatoStAN11gene involved in anthocyanin biosynthesis regulation

(2013) Wang Li et al.   Journal of Integrative Plant Biology

Complexity and robustness of the flavonoid transcriptional regulatory network revealed by comprehensive analyses of MYB-bHLH-WDR complexes and their targets in Arabidopsis seed

(2013) Wenjia Xu et al.   NEW PHYTOLOGIST

Overexpression of microRNA828 reduces anthocyanin accumulation in Arabidopsis

(2013) Fengxi Yang et al.   PLANT CELL TISSUE AND ORGAN CULTURE

New insights into the regulation of anthocyanin biosynthesis in fruits

(2013) Laura Jaakola   TRENDS IN PLANT SCIENCE

The apple WD40 protein MdTTG1 interacts with bHLH but not MYB proteins to regulate anthocyanin accumulation

(2012) Xiu-Hong An et al.   JOURNAL OF PLANT PHYSIOLOGY

Identification and characterization of MYB-bHLH-WD40 regulatory complexes controlling proanthocyanidin biosynthesis in strawberry (Fragaria × ananassa) fruits

(2012) Jan G. Schaart et al.   NEW PHYTOLOGIST

Kiwifruit floral gene APETALA2 is alternatively spliced and accumulates in aberrant indeterminate flowers in the absence of miR172

(2012) Erika Varkonyi-Gasic et al.   PLANT MOLECULAR BIOLOGY

Apple miRNAs and tasiRNAs with novel regulatory networks

(2012) Rui Xia et al.   GENOME BIOLOGY

Dietary anthocyanin-rich plants: Biochemical basis and recent progress in health benefits studies

(2011) Takanori Tsuda   MOLECULAR NUTRITION & FOOD RESEARCH

Negative Regulation of Anthocyanin Biosynthesis inArabidopsisby a miR156-Targeted SPL Transcription Factor

(2011) Jin-Ying Gou et al.   PLANT CELL

An autoregulatory feedback loop involving PAP1 and TAS4 in response to sugars in Arabidopsis

(2011) Qing-Jun Luo et al.   PLANT MOLECULAR BIOLOGY

Recent advances on the regulation of anthocyanin synthesis in reproductive organs

(2011) Katia Petroni et al.   PLANT SCIENCE

Integrated Profiling of MicroRNAs and mRNAs: MicroRNAs Located on Xq27.3 Associate with Clear Cell Renal Cell Carcinoma

(2011) Liang Zhou et al.   PLoS One

Discovery and comparative profiling of microRNAs in a sweet orange red-flesh mutant and its wild type

(2010) Qiang Xu et al.   BMC GENOMICS

Vitamin C, flower color and ploidy variation of hybrids from a ploidy-unbalanced Actinidia interspecific cross and SSR characterization

(2010) Lei Zhang et al.   EUPHYTICA

Genome-wide mapping of the HY5-mediated genenetworks in Arabidopsis that involve both transcriptional and post-transcriptional regulation

(2010) Huiyong Zhang et al.   PLANT JOURNAL

Identification and characterisation of F3GT1 and F3GGT1, two glycosyltransferases responsible for anthocyanin biosynthesis in red-fleshed kiwifruit (Actinidia chinensis )

(2010) Mirco Montefiori et al.   PLANT JOURNAL

Members of an R2R3-MYB transcription factor family in Petunia are developmentally and environmentally regulated to control complex floral and vegetative pigmentation patterning

(2010) Nick W. Albert et al.   PLANT JOURNAL

Gene ontology analysis for RNA-seq: accounting for selection bias

(2010) Matthew D Young et al.   GENOME BIOLOGY

DEGseq: an R package for identifying differentially expressed genes from RNA-seq data

(2009) Likun Wang et al.   BIOINFORMATICS

Origin, Biogenesis, and Activity of Plant MicroRNAs

(2009) Olivier Voinnet   CELL

RNA-mediated chromatin-based silencing in plants

(2009) Marjori Matzke et al.   CURRENT OPINION IN CELL BIOLOGY

Uncovering Small RNA-Mediated Responses to Phosphate Deficiency in Arabidopsis by Deep Sequencing

(2009) L.-C. Hsieh et al.   PLANT PHYSIOLOGY

WGCNA: an R package for weighted correlation network analysis

(2008) Peter Langfelder et al.   BMC BIOINFORMATICS

DNA-Binding Study Identifies C-Box and Hybrid C/G-Box or C/A-Box Motifs as High-Affinity Binding Sites for STF1 and LONG HYPOCOTYL5 Proteins

(2008) Y. H. Song et al.   PLANT PHYSIOLOGY

Liver and colon DNA oxidative damage and gene expression profiles of rats fed Arabidopsis thaliana mutant seeds containing contrasted flavonoids

(2007) Cristina Luceri et al.   FOOD AND CHEMICAL TOXICOLOGY