PIP-EL: A New Ensemble Learning Method for Improved Proinflammatory Peptide Predictions
Published 2018 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
PIP-EL: A New Ensemble Learning Method for Improved Proinflammatory Peptide Predictions
Authors
Keywords
-
Journal
Frontiers in Immunology
Volume 9, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2018-07-31
DOI
10.3389/fimmu.2018.01783
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- HBPred: a tool to identify growth hormone-binding proteins
- (2018) Hua Tang et al. International Journal of Biological Sciences
- iRSpot-Pse6NC: Identifying recombination spots in Saccharomyces cerevisiae by incorporating hexamer composition into general PseKNC
- (2018) Hui Yang et al. International Journal of Biological Sciences
- Machine-Learning-Based Prediction of Cell-Penetrating Peptides and Their Uptake Efficiency with Improved Accuracy
- (2018) Balachandran Manavalan et al. JOURNAL OF PROTEOME RESEARCH
- PVP-SVM: Sequence-Based Prediction of Phage Virion Proteins Using a Support Vector Machine
- (2018) Balachandran Manavalan et al. Frontiers in Microbiology
- AIPpred: Sequence-Based Prediction of Anti-inflammatory Peptides Using Random Forest
- (2018) Balachandran Manavalan et al. Frontiers in Pharmacology
- iRNA-3typeA: Identifying Three Types of Modification at RNA’s Adenosine Sites
- (2018) Wei Chen et al. Molecular Therapy-Nucleic Acids
- iBCE-EL: A New Ensemble Learning Framework for Improved Linear B-Cell Epitope Prediction
- (2018) Balachandran Manavalan et al. Frontiers in Immunology
- Identifying sigma70 promoters with novel pseudo nucleotide composition
- (2017) Hao Lin et al. IEEE-ACM Transactions on Computational Biology and Bioinformatics
- IonchanPred 2.0: A Tool to Predict Ion Channels and Their Types
- (2017) Ya-Wei Zhao et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Prediction of anti-inflammatory proteins/peptides: an insilico approach
- (2017) Sudheer Gupta et al. Journal of Translational Medicine
- Computational identification of protein S-sulfenylation sites by incorporating the multiple sequence features information
- (2017) Md. Mehedi Hasan et al. Molecular BioSystems
- Recent Advances in Conotoxin Classification by Using Machine Learning Methods
- (2017) Fu-Ying Dao et al. MOLECULES
- Sequence-based predictive modeling to identify cancerlectins
- (2017) Hong-Yan Lai et al. Oncotarget
- DHSpred: support-vector-machine-based human DNase I hypersensitive sites prediction using the optimal features selected by random forest
- (2017) Balachandran Manavalan et al. Oncotarget
- MLACP: machine-learning-based prediction of anticancer peptides
- (2017) Balachandran Manavalan et al. Oncotarget
- The Immune Epitope Database: How Data Are Entered and Retrieved
- (2017) Ward Fleri et al. Journal of Immunology Research
- IL17eScan: A Tool for the Identification of Peptides Inducing IL-17 Response
- (2017) Sudheer Gupta et al. Frontiers in Immunology
- The Immune Epitope Database and Analysis Resource in Epitope Discovery and Synthetic Vaccine Design
- (2017) Ward Fleri et al. Frontiers in Immunology
- Computer-aided designing of immunosuppressive peptides based on IL-10 inducing potential
- (2017) Gandharva Nagpal et al. Scientific Reports
- Detecting N6-methyladenosine sites from RNA transcriptomes using ensemble Support Vector Machines
- (2017) Wei Chen et al. Scientific Reports
- CarcinoPred-EL: Novel models for predicting the carcinogenicity of chemicals using molecular fingerprints and ensemble learning methods
- (2017) Li Zhang et al. Scientific Reports
- AOD: the antioxidant protein database
- (2017) Pengmian Feng et al. Scientific Reports
- QAcon: single model quality assessment using protein structural and contact information with machine learning techniques
- (2016) Renzhi Cao et al. BIOINFORMATICS
- Pro54DB: a database for experimentally verified sigma-54 promoters
- (2016) Zhi-Yong Liang et al. BIOINFORMATICS
- iDHS-EL: identifying DNase I hypersensitive sites by fusing three different modes of pseudo nucleotide composition into an ensemble learning framework
- (2016) Bin Liu et al. BIOINFORMATICS
- Identifying 2′-O-methylationation sites by integrating nucleotide chemical properties and nucleotide compositions
- (2016) Wei Chen et al. GENOMICS
- ProInflam: a webserver for the prediction of proinflammatory antigenicity of peptides and proteins
- (2016) Sudheer Gupta et al. Journal of Translational Medicine
- SOHPRED: a new bioinformatics tool for the characterization and prediction of human S-sulfenylation sites
- (2016) Xiaofeng Wang et al. Molecular BioSystems
- 3Drefine: an interactive web server for efficient protein structure refinement
- (2016) Debswapna Bhattacharya et al. NUCLEIC ACIDS RESEARCH
- Identification of Bacterial Cell Wall Lyases via Pseudo Amino Acid Composition
- (2016) Xin-Xin Chen et al. Biomed Research International
- Identification of Secretory Proteins inMycobacterium tuberculosisUsing Pseudo Amino Acid Composition
- (2016) Huan Yang et al. Biomed Research International
- Crysalis: an integrated server for computational analysis and design of protein crystallization
- (2016) Huilin Wang et al. Scientific Reports
- Protein single-model quality assessment by feature-based probability density functions
- (2016) Renzhi Cao et al. Scientific Reports
- iRNA-Methyl: Identifying N6-methyladenosine sites using pseudo nucleotide composition
- (2015) Wei Chen et al. ANALYTICAL BIOCHEMISTRY
- Large-scale model quality assessment for improving protein tertiary structure prediction
- (2015) Renzhi Cao et al. BIOINFORMATICS
- GlycoMine: a machine learning-based approach for predicting N-, C- and O-linked glycosylation in the human proteome
- (2015) Fuyi Li et al. BIOINFORMATICS
- Sigma-RF: prediction of the variability of spatial restraints in template-based modeling by random forest
- (2015) Juyong Lee et al. BMC BIOINFORMATICS
- Peptide therapeutics: current status and future directions
- (2015) Keld Fosgerau et al. DRUG DISCOVERY TODAY
- iPPI-Esml: An ensemble classifier for identifying the interactions of proteins by incorporating their physicochemical properties and wavelet transforms into PseAAC
- (2015) Jianhua Jia et al. JOURNAL OF THEORETICAL BIOLOGY
- Machine learning applications in genetics and genomics
- (2015) Maxwell W. Libbrecht et al. NATURE REVIEWS GENETICS
- CONFOLD: Residue-residue contact-guidedab initioprotein folding
- (2015) Badri Adhikari et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- iTIS-PseTNC: A sequence-based predictor for identifying translation initiation site in human genes using pseudo trinucleotide composition
- (2014) Wei Chen et al. ANALYTICAL BIOCHEMISTRY
- SMOQ: a tool for predicting the absolute residue-specific quality of a single protein model with support vector machines
- (2014) Renzhi Cao et al. BMC BIOINFORMATICS
- AllerTOP v.2—a server for in silico prediction of allergens
- (2014) Ivan Dimitrov et al. JOURNAL OF MOLECULAR MODELING
- Identification of bacteriophage virion proteins by the ANOVA feature selection and analysis
- (2014) Hui Ding et al. Molecular BioSystems
- The immune epitope database (IEDB) 3.0
- (2014) Randi Vita et al. NUCLEIC ACIDS RESEARCH
- Random Forest-Based Protein Model Quality Assessment (RFMQA) Using Structural Features and Potential Energy Terms
- (2014) Balachandran Manavalan et al. PLoS One
- iSS-PseDNC: Identifying Splicing Sites Using Pseudo Dinucleotide Composition
- (2014) Wei Chen et al. Biomed Research International
- Machine learning for neuroimaging with scikit-learn
- (2014) Alexandre Abraham et al. Frontiers in Neuroinformatics
- Anti-LGI1 Limbic Encephalitis Presented with Atypical Manifestations
- (2014) Jung-Ju Lee et al. Experimental Neurobiology
- iHSP-PseRAAAC: Identifying the heat shock protein families using pseudo reduced amino acid alphabet composition
- (2013) Peng-Mian Feng et al. ANALYTICAL BIOCHEMISTRY
- Human antimicrobial peptide LL-37 modulates proinflammatory responses induced by cytokine milieus and double-stranded RNA in human keratinocytes
- (2013) Xue Chen et al. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
- Identification of B-cell epitopes in an antigen for inducing specific class of antibodies
- (2013) Sudheer Gupta et al. Biology Direct
- Designing of interferon-gamma inducing MHC class-II binders
- (2013) Sandeep Kumar Dhanda et al. Biology Direct
- AllerTOP - a server for in silico prediction of allergens
- (2013) Ivan Dimitrov et al. BMC BIOINFORMATICS
- Defining and treating leucine-rich glioma inactivated 1 antibody associated autoimmunity
- (2013) Michael S. Zandi BRAIN
- Prediction of IL4 Inducing Peptides
- (2013) Sandeep Kumar Dhanda et al. Clinical & Developmental Immunology
- C-reactive protein and the biology of disease
- (2013) Waliza Ansar et al. IMMUNOLOGIC RESEARCH
- iRSpot-PseDNC: identify recombination spots with pseudo dinucleotide composition
- (2013) Wei Chen et al. NUCLEIC ACIDS RESEARCH
- Evolutionary, Structural and Functional Interplay of the IκB Family Members
- (2013) Shaherin Basith et al. PLoS One
- Improved network community structure improves function prediction
- (2013) Juyong Lee et al. Scientific Reports
- The prediction of protein structural class using averaged chemical shifts
- (2012) Hao Lin et al. JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS
- LIBSVM
- (2012) Chih-Chung Chang et al. ACM Transactions on Intelligent Systems and Technology
- Fuzzy clustering of physicochemical and biochemical properties of amino Acids
- (2011) Indrajit Saha et al. AMINO ACIDS
- In Silico Approach to Inhibition of Signaling Pathways of Toll-Like Receptors 2 and 4 by ST2L
- (2011) Shaherin Basith et al. PLoS One
- Comparative Analysis of Species-Specific Ligand Recognition in Toll-Like Receptor 8 Signaling: A Hypothesis
- (2011) Rajiv Gandhi Govindaraj et al. PLoS One
- Immunostimulatory CpG-DNA and PSA-peptide vaccination elicits profound cytotoxic T cell responses
- (2011) Tobias Maurer et al. UROLOGIC ONCOLOGY-SEMINARS AND ORIGINAL INVESTIGATIONS
- Similar Structures but Different Roles – An Updated Perspective on TLR Structures
- (2011) Balachandran Manavalan et al. Frontiers in Physiology
- NLRP3 Plays a Critical Role in the Development of Experimental Autoimmune Encephalomyelitis by Mediating Th1 and Th17 Responses
- (2010) D. Gris et al. JOURNAL OF IMMUNOLOGY
- Molecular modeling-based evaluation of dual function of IκBζ ankyrin repeat domain in toll-like receptor signaling
- (2010) Balachandran Manavalan et al. JOURNAL OF MOLECULAR RECOGNITION
- Molecular Modeling-Based Evaluation of hTLR10 and Identification of Potential Ligands in Toll-Like Receptor Signaling
- (2010) Rajiv Gandhi Govindaraj et al. PLoS One
- Structure-Function Relationship of Cytoplasmic and Nuclear IκB Proteins: An In Silico Analysis
- (2010) Balachandran Manavalan et al. PLoS One
- Molecular modeling of the reductase domain to elucidate the reaction mechanism of reduction of peptidyl thioester into its corresponding alcohol in non-ribosomal peptide synthetases
- (2010) Balachandran Manavalan et al. BMC STRUCTURAL BIOLOGY
- SOLpro: accurate sequence-based prediction of protein solubility
- (2009) Christophe N. Magnan et al. BIOINFORMATICS
- Interleukin-17 and systemic lupus erythematosus: current concepts
- (2009) A. Nalbandian et al. CLINICAL AND EXPERIMENTAL IMMUNOLOGY
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreFind the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
Search