AIPpred: Sequence-Based Prediction of Anti-inflammatory Peptides Using Random Forest
Published 2018 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
AIPpred: Sequence-Based Prediction of Anti-inflammatory Peptides Using Random Forest
Authors
Keywords
-
Journal
Frontiers in Pharmacology
Volume 9, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2018-03-27
DOI
10.3389/fphar.2018.00276
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- PVP-SVM: Sequence-Based Prediction of Phage Virion Proteins Using a Support Vector Machine
- (2018) Balachandran Manavalan et al. Frontiers in Microbiology
- Identifying sigma70 promoters with novel pseudo nucleotide composition
- (2017) Hao Lin et al. IEEE-ACM Transactions on Computational Biology and Bioinformatics
- IonchanPred 2.0: A Tool to Predict Ion Channels and Their Types
- (2017) Ya-Wei Zhao et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Mechanisms of the Innate Defense Regulator Peptide-1002 Anti-Inflammatory Activity in a Sterile Inflammation Mouse Model
- (2017) Bing Catherine Wu et al. JOURNAL OF IMMUNOLOGY
- Antimicrobial activity predictors benchmarking analysis using shuffled and designed synthetic peptides
- (2017) William F. Porto et al. JOURNAL OF THEORETICAL BIOLOGY
- Prediction of anti-inflammatory proteins/peptides: an insilico approach
- (2017) Sudheer Gupta et al. Journal of Translational Medicine
- Computational identification of protein S-sulfenylation sites by incorporating the multiple sequence features information
- (2017) Md. Mehedi Hasan et al. Molecular BioSystems
- Antimicrobial peptides: Role in human disease and potential as immunotherapies
- (2017) César de la Fuente-Núñez et al. PHARMACOLOGY & THERAPEUTICS
- Sequence-based predictive modeling to identify cancerlectins
- (2017) Hong-Yan Lai et al. Oncotarget
- DHSpred: support-vector-machine-based human DNase I hypersensitive sites prediction using the optimal features selected by random forest
- (2017) Balachandran Manavalan et al. Oncotarget
- MLACP: machine-learning-based prediction of anticancer peptides
- (2017) Balachandran Manavalan et al. Oncotarget
- iRNA-PseColl: Identifying the Occurrence Sites of Different RNA Modifications by Incorporating Collective Effects of Nucleotides into PseKNC
- (2017) Pengmian Feng et al. Molecular Therapy-Nucleic Acids
- 2L-piRNA: A Two-Layer Ensemble Classifier for Identifying Piwi-Interacting RNAs and Their Function
- (2017) Bin Liu et al. Molecular Therapy-Nucleic Acids
- IL17eScan: A Tool for the Identification of Peptides Inducing IL-17 Response
- (2017) Sudheer Gupta et al. Frontiers in Immunology
- The Immune Epitope Database and Analysis Resource in Epitope Discovery and Synthetic Vaccine Design
- (2017) Ward Fleri et al. Frontiers in Immunology
- Computer-aided designing of immunosuppressive peptides based on IL-10 inducing potential
- (2017) Gandharva Nagpal et al. Scientific Reports
- Prediction of cell-penetrating peptides with feature selection techniques
- (2016) Hua Tang et al. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
- QAcon: single model quality assessment using protein structural and contact information with machine learning techniques
- (2016) Renzhi Cao et al. BIOINFORMATICS
- SOHPRED: a new bioinformatics tool for the characterization and prediction of human S-sulfenylation sites
- (2016) Xiaofeng Wang et al. Molecular BioSystems
- A comparison of machine learning methods for classification using simulation with multiple real data examples from mental health studies
- (2016) Mizanur Khondoker et al. STATISTICAL METHODS IN MEDICAL RESEARCH
- iACP: a sequence-based tool for identifying anticancer peptides
- (2016) Wei Chen et al. Oncotarget
- iRNA-AI: identifying the adenosine to inosine editing sites in RNA sequences
- (2016) Wei Chen et al. Oncotarget
- Identification of Bacterial Cell Wall Lyases via Pseudo Amino Acid Composition
- (2016) Xin-Xin Chen et al. Biomed Research International
- Protein single-model quality assessment by feature-based probability density functions
- (2016) Renzhi Cao et al. Scientific Reports
- Sigma-RF: prediction of the variability of spatial restraints in template-based modeling by random forest
- (2015) Juyong Lee et al. BMC BIOINFORMATICS
- Effects of antimicrobial peptide L-K6, a temporin-1CEb analog on oral pathogen growth, Streptococcus mutans biofilm formation, and anti-inflammatory activity
- (2014) Dejing Shang et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- SMOQ: a tool for predicting the absolute residue-specific quality of a single protein model with support vector machines
- (2014) Renzhi Cao et al. BMC BIOINFORMATICS
- Identification of bacteriophage virion proteins by the ANOVA feature selection and analysis
- (2014) Hui Ding et al. Molecular BioSystems
- Random Forest-Based Protein Model Quality Assessment (RFMQA) Using Structural Features and Potential Energy Terms
- (2014) Balachandran Manavalan et al. PLoS One
- Identification of B-cell epitopes in an antigen for inducing specific class of antibodies
- (2013) Sudheer Gupta et al. Biology Direct
- Prediction of IL4 Inducing Peptides
- (2013) Sandeep Kumar Dhanda et al. Clinical & Developmental Immunology
- Protein kinase inhibitors in the treatment of inflammatory and autoimmune diseases
- (2013) H. Patterson et al. CLINICAL AND EXPERIMENTAL IMMUNOLOGY
- iRSpot-PseDNC: identify recombination spots with pseudo dinucleotide composition
- (2013) Wei Chen et al. NUCLEIC ACIDS RESEARCH
- Evolutionary, Structural and Functional Interplay of the IκB Family Members
- (2013) Shaherin Basith et al. PLoS One
- Anti-Inflammatory Therapy in Chronic Disease: Challenges and Opportunities
- (2013) I. Tabas et al. SCIENCE
- Improved network community structure improves function prediction
- (2013) Juyong Lee et al. Scientific Reports
- Roles of toll-like receptors in Cancer: A double-edged sword for defense and offense
- (2012) Shaherin Basith et al. ARCHIVES OF PHARMACAL RESEARCH
- Optimization of current and future therapy for autoimmune diseases
- (2012) Lawrence Steinman et al. NATURE MEDICINE
- AVPpred: collection and prediction of highly effective antiviral peptides
- (2012) Nishant Thakur et al. NUCLEIC ACIDS RESEARCH
- Fuzzy clustering of physicochemical and biochemical properties of amino Acids
- (2011) Indrajit Saha et al. AMINO ACIDS
- Toll-like receptor modulators: a patent review (2006 – 2010)
- (2011) Shaherin Basith et al. EXPERT OPINION ON THERAPEUTIC PATENTS
- In Silico Approach to Inhibition of Signaling Pathways of Toll-Like Receptors 2 and 4 by ST2L
- (2011) Shaherin Basith et al. PLoS One
- Comparative Analysis of Species-Specific Ligand Recognition in Toll-Like Receptor 8 Signaling: A Hypothesis
- (2011) Rajiv Gandhi Govindaraj et al. PLoS One
- CD-HIT Suite: a web server for clustering and comparing biological sequences
- (2010) Ying Huang et al. BIOINFORMATICS
- Molecular modeling-based evaluation of dual function of IκBζ ankyrin repeat domain in toll-like receptor signaling
- (2010) Balachandran Manavalan et al. JOURNAL OF MOLECULAR RECOGNITION
- Some remarks on protein attribute prediction and pseudo amino acid composition
- (2010) Kuo-Chen Chou JOURNAL OF THEORETICAL BIOLOGY
- Molecular Modeling-Based Evaluation of hTLR10 and Identification of Potential Ligands in Toll-Like Receptor Signaling
- (2010) Rajiv Gandhi Govindaraj et al. PLoS One
- Structure-Function Relationship of Cytoplasmic and Nuclear IκB Proteins: An In Silico Analysis
- (2010) Balachandran Manavalan et al. PLoS One
- Molecular modeling of the reductase domain to elucidate the reaction mechanism of reduction of peptidyl thioester into its corresponding alcohol in non-ribosomal peptide synthetases
- (2010) Balachandran Manavalan et al. BMC STRUCTURAL BIOLOGY
- Cell specificity, anti-inflammatory activity, and plausible bactericidal mechanism of designed Trp-rich model antimicrobial peptides
- (2009) Ka Hyon Park et al. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES
- SOLpro: accurate sequence-based prediction of protein solubility
- (2009) Christophe N. Magnan et al. BIOINFORMATICS
- Understanding autoimmune disease: new targets for drug discovery
- (2009) Cristina Balagué et al. DRUG DISCOVERY TODAY
- Chronic inflammation and asthma
- (2009) Jenna R. Murdoch et al. MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS
- Origin and physiological roles of inflammation
- (2008) Ruslan Medzhitov NATURE
- Immune epitope database analysis resource (IEDB-AR)
- (2008) Q. Zhang et al. NUCLEIC ACIDS RESEARCH
Become a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get StartedAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started