Side-by-side and exo-pitting degradation mechanism revealed from in vitro human fecal fermentation of granular starches

Cell Wall Integrity of Pulse Modulates the in Vitro Fecal Fermentation Rate and Microbiota Composition

(2020) Nannan Guan et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

The Controversial Role of Human Gut Lachnospiraceae

(2020) Mirco Vacca et al.   Microorganisms

In vitro colonic fermentation of dietary fibers: Fermentation rate, short-chain fatty acid production and changes in microbiota

(2019) Miaomiao Wang et al.   TRENDS IN FOOD SCIENCE & TECHNOLOGY

Macronutrient metabolism by the human gut microbiome: major fermentation by-products and their impact on host health

(2019) Kaitlyn Oliphant et al.   Microbiome

Chemical Cross-Linking Controls in Vitro Fecal Fermentation Rate of High-Amylose Maize Starches and Regulates Gut Microbiota Composition

(2019) Shaokang Wang et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

The Impact of Dietary Fiber on Gut Microbiota in Host Health and Disease

(2018) Kassem Makki et al.   Cell Host & Microbe

Food Starch Structure Impacts Gut Microbiome Composition

(2018) Frederick J. Warren et al.   mSphere

OUP accepted manuscript

(2018)   Advances in Nutrition

Mechanistic Insights Into the Cross-Feeding of Ruminococcus gnavus and Ruminococcus bromii on Host and Dietary Carbohydrates

(2018) Emmanuelle H. Crost et al.   Frontiers in Microbiology

Reduction in fecal microbiota diversity and short-chain fatty acid producers in Methicillin-resistant Staphylococcus aureus infected individuals as revealed by PacBio single molecule, real-time sequencing technology

(2017) J. Zhao et al.   EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES

Structural Orders of Wheat Starch Do Not Determine the In Vitro Enzymatic Digestibility

(2017) Shujun Wang et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Encapsulation of Ethylene Gas into Granular Cold-Water-Soluble Starch: Structure and Release Kinetics

(2017) Linfan Shi et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Impact of Dietary Resistant Starch on the Human Gut Microbiome, Metaproteome, and Metabolome

(2017) Tanja V. Maier et al.   mBio

Determination of Resistant Starch Assimilating Bacteria in Fecal Samples of Mice by In vitro RNA-Based Stable Isotope Probing

(2017) Elena Herrmann et al.   Frontiers in Microbiology

Formation of propionate and butyrate by the human colonic microbiota

(2016) Petra Louis et al.   ENVIRONMENTAL MICROBIOLOGY

Polysaccharide Degradation by the Intestinal Microbiota and Its Influence on Human Health and Disease

(2016) Darrell W. Cockburn et al.   JOURNAL OF MOLECULAR BIOLOGY

Intestinal Short Chain Fatty Acids and their Link with Diet and Human Health

(2016) David Ríos-Covián et al.   Frontiers in Microbiology

Variable responses of human microbiomes to dietary supplementation with resistant starch

(2016) A. Venkataraman et al.   Microbiome

Important Metabolic Pathways and Biological Processes Expressed by Chicken Cecal Microbiota

(2015) Ondrej Polansky et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The biosynthesis, structure and gelatinization properties of starches from wild and cultivated African rice species (Oryza barthii and Oryza glaberrima)

(2015) Kai Wang et al.   CARBOHYDRATE POLYMERS

Densely packed matrices as rate determining features in starch hydrolysis

(2015) Bin Zhang et al.   TRENDS IN FOOD SCIENCE & TECHNOLOGY

Unique Organization of Extracellular Amylases into Amylosomes in the Resistant Starch-Utilizing Human Colonic Firmicutes Bacterium Ruminococcus bromii

(2015) Xiaolei Ze et al.   mBio

Freeze-Drying Changes the Structure and Digestibility of B-Polymorphic Starches

(2014) Bin Zhang et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Mechanism for Starch Granule Ghost Formation Deduced from Structural and Enzyme Digestion Properties

(2014) Bin Zhang et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Variation in Amylose Fine Structure of Starches from Different Botanical Sources

(2014) Kai Wang et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Choosing and using diversity indices: insights for ecological applications from the German Biodiversity Exploratories

(2014) E. Kathryn Morris et al.   Ecology and Evolution

Synergistic and Antagonistic Effects of α-Amylase and Amyloglucosidase on Starch Digestion

(2013) Bin Zhang et al.   BIOMACROMOLECULES

Hydrocolloids in the digestive tract and related health implications

(2013) Michael J. Gidley   CURRENT OPINION IN COLLOID & INTERFACE SCIENCE

The abundance and variety of carbohydrate-active enzymes in the human gut microbiota

(2013) Abdessamad El Kaoutari et al.   NATURE REVIEWS MICROBIOLOGY

Human Gut Microbiota Changes Reveal the Progression of Glucose Intolerance

(2013) Xiuying Zhang et al.   PLoS One

Resistant Starch: Promise for Improving Human Health

(2013) Diane F. Birt et al.   Advances in Nutrition

Blautia faecis sp. nov., isolated from human faeces

(2012) S.-K. Park et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Ruminococcus bromii is a keystone species for the degradation of resistant starch in the human colon

(2012) Xiaolei Ze et al.   ISME Journal

Structure, function and diversity of the healthy human microbiome

(2012)   NATURE

Comparative fecal metagenomics unveils unique functional capacity of the swine gut

(2011) Regina Lamendella et al.   BMC MICROBIOLOGY

Amylose content in starches: Toward optimal definition and validating experimental methods

(2011) Francisco Vilaplana et al.   CARBOHYDRATE POLYMERS

In Vitro Batch Fecal Fermentation Comparison of Gas and Short-Chain Fatty Acid Production Using “Slowly Fermentable” Dietary Fibers

(2011) Amandeep Kaur et al.   JOURNAL OF FOOD SCIENCE

Fecal Butyrate Levels Vary Widely among Individuals but Are Usually Increased by a Diet High in Resistant Starch

(2011) Alexandra L. McOrist et al.   JOURNAL OF NUTRITION

Resistant starch as prebiotic: A review

(2011) Evangélica Fuentes-Zaragoza et al.   STARCH-STARKE

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Using chain-length distributions to diagnose genetic diversity in starch biosynthesis

(2010) Rosa Paula Cuevas et al.   CARBOHYDRATE POLYMERS

Extraction and dissolution of starch from rice and sorghum grains for accurate structural analysis

(2010) Z.A. Syahariza et al.   CARBOHYDRATE POLYMERS

Role of gut microbiota in the control of energy and carbohydrate metabolism

(2010) Koen Venema   CURRENT OPINION IN CLINICAL NUTRITION AND METABOLIC CARE

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Characterization of Starch by Size-Exclusion Chromatography: The Limitations Imposed by Shear Scission

(2009) Richard A. Cave et al.   BIOMACROMOLECULES

Starch-entrapped microspheres show a beneficial fermentation profile and decrease in potentially harmful bacteria during in vitro fermentation in faecal microbiota obtained from patients with inflammatory bowel disease

(2009) Devin J. Rose et al.   BRITISH JOURNAL OF NUTRITION

Structural Differences among Alkali-Soluble Arabinoxylans from Maize (Zea mays), Rice (Oryza sativa), and Wheat (Triticum aestivum) Brans Influence Human Fecal Fermentation Profiles

(2009) Devin J. Rose et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Statistical Methods for Detecting Differentially Abundant Features in Clinical Metagenomic Samples

(2009) James Robert White et al.   PLoS Computational Biology

Phylotypes related to Ruminococcus bromii are abundant in the large bowel of humans and increase in response to a diet high in resistant starch

(2008) Guy C.J. Abell et al.   FEMS MICROBIOLOGY ECOLOGY