Metabarcoding using multiplexed markers increases species detection in complex zooplankton communities
Published 2018 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Metabarcoding using multiplexed markers increases species detection in complex zooplankton communities
Authors
Keywords
-
Journal
Evolutionary Applications
Volume -, Issue -, Pages -
Publisher
Wiley
Online
2018-08-14
DOI
10.1111/eva.12694
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Barcode-based species delimitation in the marine realm: a test using Hexanauplia (Multicrustacea: Thecostraca and Copepoda)
- (2017) Robert G. Young et al. GENOME
- Effect of marker choice and thermal cycling protocol on zooplankton DNA metabarcoding studies
- (2017) Laurence J. Clarke et al. Ecology and Evolution
- Early detection of aquatic invaders using metabarcoding reveals a high number of non-indigenous species in Canadian ports
- (2016) Emily A. Brown et al. DIVERSITY AND DISTRIBUTIONS
- Metabarcoding reveals strong spatial structure and temporal turnover of zooplankton communities among marine and freshwater ports
- (2016) Frédéric J. J. Chain et al. DIVERSITY AND DISTRIBUTIONS
- Metabarcoding of marine zooplankton: prospects, progress and pitfalls
- (2016) Ann Bucklin et al. JOURNAL OF PLANKTON RESEARCH
- Next-generation monitoring of aquatic biodiversity using environmental DNA metabarcoding
- (2016) Alice Valentini et al. MOLECULAR ECOLOGY
- The ecologist's field guide to sequence-based identification of biodiversity
- (2016) Simon Creer et al. Methods in Ecology and Evolution
- Testing the potential of a ribosomal 16S marker for DNA metabarcoding of insects
- (2016) Vasco Elbrecht et al. PeerJ
- Metabarcoding approach for the ballast water surveillance – An advantageous solution or an awkward challenge?
- (2015) Anastasija Zaiko et al. MARINE POLLUTION BULLETIN
- Divergence thresholds and divergent biodiversity estimates: can metabarcoding reliably describe zooplankton communities?
- (2015) Emily A. Brown et al. Ecology and Evolution
- Toward accurate molecular identification of species in complex environmental samples: testing the performance of sequence filtering and clustering methods
- (2015) Jullien M. Flynn et al. Ecology and Evolution
- Evaluating a multigene environmental DNA approach for biodiversity assessment
- (2015) Alexei J. Drummond et al. GigaScience
- MiFish, a set of universal PCR primers for metabarcoding environmental DNA from fishes: detection of more than 230 subtropical marine species
- (2015) M. Miya et al. Royal Society Open Science
- Massively parallel multiplex DNA sequencing for specimen identification using an Illumina MiSeq platform
- (2015) Shadi Shokralla et al. Scientific Reports
- DNA metabarcoding and the cytochrome c oxidase subunit I marker: not a perfect match
- (2014) B. E. Deagle et al. Biology Letters
- Effects of long-term differential fertilization on eukaryotic microbial communities in an arable soil: a multiple barcoding approach
- (2014) Guillaume Lentendu et al. MOLECULAR ECOLOGY
- Environmental metabarcodes for insects:in silicoPCR reveals potential for taxonomic bias
- (2014) Laurence J. Clarke et al. Molecular Ecology Resources
- Universal and blocking primer mismatches limit the use of high-throughput DNA sequencing for the quantitative metabarcoding of arthropods
- (2014) J. Piñol et al. Molecular Ecology Resources
- A new versatile primer set targeting a short fragment of the mitochondrial COI region for metabarcoding metazoan diversity: application for characterizing coral reef fish gut contents
- (2013) Matthieu Leray et al. Frontiers in Zoology
- Next-generation sequencing to inventory taxonomic diversity in eukaryotic communities: a test for freshwater diatoms
- (2013) L. Kermarrec et al. Molecular Ecology Resources
- Illumina metabarcoding of a soil fungal community
- (2013) Philipp-André Schmidt et al. SOIL BIOLOGY & BIOCHEMISTRY
- SOAPBarcode: revealing arthropod biodiversity through assembly of Illumina shotgun sequences of PCR amplicons
- (2013) Shanlin Liu et al. Methods in Ecology and Evolution
- High sensitivity of 454 pyrosequencing for detection of rare species in aquatic communities
- (2013) Aibin Zhan et al. Methods in Ecology and Evolution
- Ultra-deep sequencing enables high-fidelity recovery of biodiversity for bulk arthropod samples without PCR amplification
- (2013) Xin Zhou et al. GigaScience
- Selection of Marker Genes Using Whole-Genome DNA Polymorphism Analysis
- (2012) Harry M. Bohle et al. Evolutionary Bioinformatics
- The future of environmental DNA in ecology
- (2012) NIGEL G. YOCCOZ MOLECULAR ECOLOGY
- Environmental DNA
- (2012) PIERRE TABERLET et al. MOLECULAR ECOLOGY
- The widely used small subunit 18S rDNA molecule greatly underestimates true diversity in biodiversity surveys of the meiofauna
- (2012) C. Q. Tang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Monitoring endangered freshwater biodiversity using environmental DNA
- (2011) PHILIP FRANCIS THOMSEN et al. MOLECULAR ECOLOGY
- A “Rosetta Stone” for metazoan zooplankton: DNA barcode analysis of species diversity of the Sargasso Sea (Northwest Atlantic Ocean)
- (2010) Ann Bucklin et al. DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY
- DNA barcoding of marine crustaceans from the Estuary and Gulf of St Lawrence: a regional-scale approach
- (2009) ADRIANA E. RADULOVICI et al. Molecular Ecology Resources
- Barcoding of Plants and Fungi
- (2009) M. W. Chase et al. SCIENCE
- A universal DNA mini-barcode for biodiversity analysis
- (2008) Isabelle Meusnier et al. BMC GENOMICS
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now