Bridging the past and the future of virology: Surface plasmon resonance as a powerful tool to investigate virus/host interactions

HIV-1 matrix protein p17 binds to the IL-8 receptor CXCR1 and shows IL-8-like chemokine activity on monocytes through Rho/ROCK activation

(2012) C. Giagulli et al.   BLOOD

Aminoacylase 3 binds to and cleaves the N-terminus of the hepatitis C virus core protein

(2012) Kirill Tsirulnikov et al.   FEBS LETTERS

Sialic Acid Associated with αvβ3Integrin Mediates HIV-1 Tat Protein Interaction and Endothelial Cell Proangiogenic Activation

(2012) Paola Chiodelli et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The Stem Region of Premembrane Protein Plays an Important Role in the Virus Surface Protein Rearrangement during Dengue Maturation

(2012) Qian Zhang et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Epstein-Barr Virus IL-10 Engages IL-10R1 by a Two-step Mechanism Leading to Altered Signaling Properties

(2012) Sung Il Yoon et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Comparative analysis of virus–host interactomes with a mammalian high-throughput protein complementation assay based on Gaussia princeps luciferase

(2012) Grégory Neveu et al.   METHODS

Influenza Polymerase Activity Correlates with the Strength of Interaction between Nucleoprotein and PB2 through the Host-Specific Residue K/E627

(2012) Andy Ka-Leung Ng et al.   PLoS One

HIV-1 matrix protein p17 promotes angiogenesis via chemokine receptors CXCR1 and CXCR2

(2012) F. Caccuri et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The intriguing Cyclophilin A-HIV-1 Vpr interaction: prolyl cis/trans isomerisation catalysis and specific binding

(2012) Sara M Solbak et al.   BMC STRUCTURAL BIOLOGY

Enhancement of Chemokine Function as an Immunomodulatory Strategy Employed by Human Herpesviruses

(2012) Abel Viejo-Borbolla et al.   PLoS Pathogens

Exploitation of Lipid Components by Viral and Host Proteins for Hepatitis C Virus Infection

(2012) Kohji Moriishi et al.   Frontiers in Microbiology

Deciphering Novel Host–Herpesvirus Interactions by Virion Proteomics

(2012) Roger Lippé   Frontiers in Microbiology

Role of the HIV-1 Matrix Protein in Gag Intracellular Trafficking and Targeting to the Plasma Membrane for Virus Assembly

(2012) Ruba H. Ghanam et al.   Frontiers in Microbiology

The Binding of Hepatitis B Virus X Protein to Glioma-Associated Oncogene Homologue 1 and its Biological Characterization In vitro

(2011) Bo Bae Jo et al.   APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY

Structural and functional insights into IκB-α/HIV-1 Tat interaction

(2011) Luigi Vitagliano et al.   BIOCHIMIE

Oligomerization paths of the nucleoprotein of influenza A virus

(2011) B. Tarus et al.   BIOCHIMIE

Monitoring influenza hemagglutinin and glycan interactions using surface plasmon resonance

(2011) Emi Suenaga et al.   BIOSENSORS & BIOELECTRONICS

Computational biology approaches for selecting host–pathogen drug targets

(2011) James R. Brown et al.   DRUG DISCOVERY TODAY

Glycosaminoglycans mediate retention of the poxvirus type I interferon binding protein at the cell surface to locally block interferon antiviral responses

(2011) Imma Montanuy et al.   FASEB JOURNAL

Interaction of the Influenza A Virus Polymerase PB2 C-terminal Region with Importin α Isoforms Provides Insights into Host Adaptation and Polymerase Assembly

(2011) Stephane Boivin et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Biochemically Defined HIV-1 Envelope Glycoprotein Variant Immunogens Display Differential Binding and Neutralizing Specificities to the CD4-binding Site

(2011) Yu Feng et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Adenovirus E3-19K Proteins of Different Serotypes and Subgroups Have Similar, Yet Distinct, Immunomodulatory Functions toward Major Histocompatibility Class I Molecules

(2011) Jie Fu et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Cells under siege: Viral glycoprotein interactions at the cell surface

(2011) Thomas A. Bowden et al.   JOURNAL OF STRUCTURAL BIOLOGY

Respiratory Syncytial Virus Glycoprotein G Interacts with DC-SIGN and L-SIGN To Activate ERK1 and ERK2

(2011) T. R. Johnson et al.   JOURNAL OF VIROLOGY

Fusion of Epstein-Barr Virus with Epithelial Cells Can Be Triggered by  v 5 in Addition to  v 6 and  v 8, and Integrin Binding Triggers a Conformational Change in Glycoproteins gHgL

(2011) L. S. Chesnokova et al.   JOURNAL OF VIROLOGY

Avidity Binding of Human Adenovirus Serotypes 3 and 7 to the Membrane Cofactor CD46 Triggers Infection

(2011) H. V. Trinh et al.   JOURNAL OF VIROLOGY

Poxvirus A46 protein binds to TIR domain-containing Mal/TIRAP via an α-helical sub-domain

(2011) Shun-ichiro Oda et al.   MOLECULAR IMMUNOLOGY

Subversion of the actin cytoskeleton during viral infection

(2011) Matthew P. Taylor et al.   NATURE REVIEWS MICROBIOLOGY

Cell Entry and Trafficking of Human Adenovirus Bound to Blood Factor X Is Determined by the Fiber Serotype and Not Hexon:Heparan Sulfate Interaction

(2011) Stéphanie Corjon et al.   PLoS One

Nuclear Exportin Receptor CAS Regulates the NPI-1–Mediated Nuclear Import of HIV-1 Vpr

(2011) Eri Takeda et al.   PLoS One

DC-SIGN Increases the Affinity of HIV-1 Envelope Glycoprotein Interaction with CD4

(2011) Karolin Hijazi et al.   PLoS One

The Host-Pathogen interaction of human cyclophilin A and HIV-1 Vpr requires specific N-terminal and novel C-terminal domains

(2011) Sara MØ Solbak et al.   BMC STRUCTURAL BIOLOGY

Identification of High-Affinity PB1-Derived Peptides with Enhanced Affinity to the PA Protein of Influenza A Virus Polymerase

(2010) Kerstin Wunderlich et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

BSA conjugates bearing multiple copies of the basic domain of HIV-1 Tat: Prototype for the development of multitarget inhibitors of extracellular Tat

(2010) Antonella Bugatti et al.   ANTIVIRAL RESEARCH

Highly Sensitive Analysis of the Interaction between HIV-1 Gag and Phosphoinositide Derivatives Based on Surface Plasmon Resonance

(2010) Kensaku Anraku et al.   BIOCHEMISTRY

Role of membranotropic sequences from herpes simplex virus type I glycoproteins B and H in the fusion process

(2010) Stefania Galdiero et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES

Formal reasoning on qualitative models of coinfection of HIV and Tuberculosis and HAART therapy

(2010) Anil Sorathiya et al.   BMC BIOINFORMATICS

Interaction of viruses with host cell molecular motors

(2010) Ming Je Hsieh et al.   CURRENT OPINION IN BIOTECHNOLOGY

The receptor preference of influenza viruses

(2010) Bo Meng et al.   Influenza and Other Respiratory Viruses

Epstein-Barr virus-encoded EBNA-5 forms trimolecular protein complexes with MDM2 and p53 and inhibits the transactivating function of p53

(2010) Elena Kashuba et al.   INTERNATIONAL JOURNAL OF CANCER

Allelic polymorphism in the T cell receptor and its impact on immune responses

(2010) Stephanie Gras et al.   JOURNAL OF EXPERIMENTAL MEDICINE

Domain Swapping Reveals Complement Control Protein Modules Critical for Imparting Cofactor and Decay-Accelerating Activities in Vaccinia Virus Complement Control Protein

(2010) M. Ahmad et al.   JOURNAL OF IMMUNOLOGY

Hepatitis B virus core interacts with the host cell nucleolar protein, nucleophosmin 1

(2010) Su Jin Lee et al.   JOURNAL OF MICROBIOLOGY

Surface plasmon resonance analysis of the binding of high-risk mucosal HPV E6 oncoproteins to the PDZ1 domain of the tight junction protein MAGI-1

(2010) Sadek Fournane et al.   JOURNAL OF MOLECULAR RECOGNITION

Are Scoring Functions in Protein−Protein Docking Ready To Predict Interactomes? Clues from a Novel Binding Affinity Benchmark

(2010) Panagiotis L. Kastritis et al.   JOURNAL OF PROTEOME RESEARCH

Physical Interaction between the Herpes Simplex Virus Type 1 Exonuclease, UL12, and the DNA Double-Strand Break-Sensing MRN Complex

(2010) N. Balasubramanian et al.   JOURNAL OF VIROLOGY

The Kaposi's Sarcoma-Associated Herpesvirus G Protein-Coupled Receptor Contains an Immunoreceptor Tyrosine-Based Inhibitory Motif That Activates Shp2

(2010) N. Philpott et al.   JOURNAL OF VIROLOGY

Herpes Simplex Virus Type 1 Helicase-Primase: DNA Binding and Consequent Protein Oligomerization and Primase Activation

(2010) Y. Chen et al.   JOURNAL OF VIROLOGY

1a/1b Subtype Profiling of Nonnucleoside Polymerase Inhibitors of Hepatitis C Virus

(2010) O. Nyanguile et al.   JOURNAL OF VIROLOGY

Structure of Adenovirus Type 21 Knob in Complex with CD46 Reveals Key Differences in Receptor Contacts among Species B Adenoviruses

(2010) K. Cupelli et al.   JOURNAL OF VIROLOGY

HIV-1 Tat and Host AFF4 Recruit Two Transcription Elongation Factors into a Bifunctional Complex for Coordinated Activation of HIV-1 Transcription

(2010) Nanhai He et al.   MOLECULAR CELL

Desmoglein 2 is a receptor for adenovirus serotypes 3, 7, 11 and 14

(2010) Hongjie Wang et al.   NATURE MEDICINE

The GD1a glycan is a cellular receptor for adenoviruses causing epidemic keratoconjunctivitis

(2010) Emma C Nilsson et al.   NATURE MEDICINE

Vaccines with MF59 Adjuvant Expand the Antibody Repertoire to Target Protective Sites of Pandemic Avian H5N1 Influenza Virus

(2010) S. Khurana et al.   Science Translational Medicine

Virus assembly, allostery and antivirals

(2010) Adam Zlotnick et al.   TRENDS IN MICROBIOLOGY

Structural characterization of the Hepatitis C Virus NS3 protease from genotype 3a: The basis of the genotype 1b vs. 3a inhibitor potency shift

(2010) Mariana Gallo et al.   VIROLOGY

Interactions of SARS Coronavirus Nucleocapsid Protein with the host cell proteasome subunit p42

(2010) Qin Wang et al.   Virology Journal

APOBEC3G directly binds Hepatitis B virus core protein in cell and cell free systems

(2010) Dongjiu Zhao et al.   VIRUS RESEARCH

Glycosphingolipids as Receptors for Non-Enveloped Viruses

(2010) Stefan Taube et al.   Viruses-Basel

Interaction of Host Cellular Proteins with Components of the Hepatitis Delta Virus

(2010) Valerie Greco-Stewart et al.   Viruses-Basel

Genetic and Structural Basis for Selection of a Ubiquitous T Cell Receptor Deployed in Epstein-Barr Virus Infection

(2010) John J. Miles et al.   PLoS Pathogens

Structure of the HCMV UL16-MICB Complex Elucidates Select Binding of a Viral Immunoevasin to Diverse NKG2D Ligands

(2010) Steffen Müller et al.   PLoS Pathogens

Structure of the HIV-1 gp41 Membrane-Proximal Ectodomain Region in a Putative Prefusion Conformation†,‡

(2009) Jie Liu et al.   BIOCHEMISTRY

Mechanisms of Receptor/Coreceptor-Mediated Entry of Enveloped Viruses

(2009) Sarah A. Nowak et al.   BIOPHYSICAL JOURNAL

Identification of coagulation factor (F)X binding sites on the adenovirus serotype 5 hexon: effect of mutagenesis on FX interactions and gene transfer

(2009) R. Alba et al.   BLOOD

The Cell Biology of HIV-1 Virion Genesis

(2009) Paul D. Bieniasz   Cell Host & Microbe

Factors Affecting Protein-Glycan Specificity: Effect of Spacers and Incubation Time

(2009) Daniel M. Lewallen et al.   CHEMBIOCHEM

Interactions of HIV-1 Antibodies 2F5 and 4E10 with a gp41 Epitope Prebound to Host and Viral Membrane Model Systems

(2009) Ana S. Veiga et al.   CHEMBIOCHEM

The highly virulent variola and monkeypox viruses express secreted inhibitors of type I interferon

(2009) María del Mar Fernández de Marco et al.   FASEB JOURNAL

The Shaping of T Cell Receptor Recognition by Self-Tolerance

(2009) Stephanie Gras et al.   IMMUNITY

A Turn-like Structure “KKPE” Segment Mediates the Specific Binding of Viral Protein A27 to Heparin and Heparan Sulfate on Cell Surfaces

(2009) Ping-Chen Shih et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Identifying and Characterizing a Functional HIV-1 Reverse Transcriptase-binding Site on Integrase

(2009) Thomas A. Wilkinson et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Initiation of Hepatitis C Virus Infection Requires the Dynamic Microtubule Network

(2009) Farzin Roohvand et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Orf virus-encoded chemokine-binding protein is a potent inhibitor of inflammatory monocyte recruitment in a mouse skin model

(2009) Z. Lateef et al.   JOURNAL OF GENERAL VIROLOGY

Multivalent Binding of Carbohydrates by the Human  -Defensin, HD5

(2009) R. I. Lehrer et al.   JOURNAL OF IMMUNOLOGY

Binding Site Detection and Druggability Index from First Principles

(2009) Jesus Seco et al.   JOURNAL OF MEDICINAL CHEMISTRY

Determinants of Stability for the E6 Protein of Papillomavirus Type 16

(2009) Yuqi Liu et al.   JOURNAL OF MOLECULAR BIOLOGY

E6 Proteins from Diverse Papillomaviruses Self-Associate Both In Vitro and In Vivo

(2009) Katia Zanier et al.   JOURNAL OF MOLECULAR BIOLOGY

HIV-1 Tat Protein-Induced Rapid and Reversible Decrease in [3H]Dopamine Uptake: Dissociation of [3H]Dopamine Uptake and [3H]2 -Carbomethoxy-3- -(4-fluorophenyl)tropane (WIN 35,428) Binding in Rat Striatal Synaptosomes

(2009) J. Zhu et al.   JOURNAL OF PHARMACOLOGY AND EXPERIMENTAL THERAPEUTICS

The Requirement for Cellular Transportin 3 (TNPO3 or TRN-SR2) during Infection Maps to Human Immunodeficiency Virus Type 1 Capsid and Not Integrase

(2009) L. Krishnan et al.   JOURNAL OF VIROLOGY

Influence of Coagulation Factor X on In Vitro and In Vivo Gene Delivery by Adenovirus (Ad) 5, Ad35, and Chimeric Ad5/Ad35 Vectors

(2009) Jenny A Greig et al.   MOLECULAR THERAPY

Elucidation of the stability and functional regions of the human coronavirus OC43 nucleocapsid protein

(2009) Chun-Yu Huang et al.   PROTEIN SCIENCE

Exploiting Surface Plasmon Resonance (SPR) Technology for the Identification of Fibroblast Growth Factor-2 (FGF2) Antagonists Endowed with Antiangiogenic Activity

(2009) Marco Rusnati et al.   SENSORS

Structure-Based Stabilization of HIV-1 gp120 Enhances Humoral Immune Responses to the Induced Co-Receptor Binding Site

(2009) Barna Dey et al.   PLoS Pathogens

Monitoring of influenza virus hemagglutinin in process samples using weak affinity ligands and surface plasmon resonance

(2008) Carl-Fredrik Mandenius et al.   ANALYTICA CHIMICA ACTA

Sulfated K5 Escherichia coli Polysaccharide Derivatives as Wide-Range Inhibitors of Genital Types of Human Papillomavirus

(2008) D. Lembo et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Heparin-like glycosaminoglycans prevent the infection of measles virus in SLAM-negative cell lines

(2008) Y TERAOMUTO et al.   ANTIVIRAL RESEARCH

Phosphorylation of hepatitis B virus core C-terminally truncated protein (Cp149) by PKC increases capsid assembly and stability

(2008) Hang Kang et al.   BIOCHEMICAL JOURNAL

Quantitative analysis of the interactions between HIV-1 integrase and retroviral reverse transcriptases

(2008) Alon Herschhorn et al.   BIOCHEMICAL JOURNAL

RNA Unwinding Activity of the Hepatitis C Virus NS3 Helicase Is Modulated by the NS5B Polymerase†

(2008) Thomas A. Jennings et al.   BIOCHEMISTRY

Podophyllotoxin directly binds a hinge domain in E2 of HPV and inhibits an E2/E7 interaction in vitro

(2008) Takeki Saitoh et al.   BIOORGANIC & MEDICINAL CHEMISTRY

Tyrosine-sulfate isosteres of CCR5 N-terminus as tools for studying HIV-1 entry

(2008) Son N. Lam et al.   BIOORGANIC & MEDICINAL CHEMISTRY

Adenovirus Serotype 5 Hexon Mediates Liver Gene Transfer

(2008) Simon N. Waddington et al.   CELL

Detection of the Active Components of Calf Thymus Nuclear Proteins (TNP), Histones that are Binding with High Affinity to HIV-1 Envelope Proteins and CD4 Molecules

(2008) Grigor Mamikonyan et al.   CURRENT HIV RESEARCH

Structure of the influenza virus A H5N1 nucleoprotein: implications for RNA binding, oligomerization, and vaccine design

(2008) Andy Ka-Leung Ng et al.   FASEB JOURNAL

Viral infection and human disease - insights from minimotifs

(2008) Krishna Kadaveru   Frontiers in Bioscience-Landmark

HIV-1 Broadly Neutralizing Antibody Extracts Its Epitope from a Kinked gp41 Ectodomain Region on the Viral Membrane

(2008) Zhen-Yu J. Sun et al.   IMMUNITY

The HIV-1 Envelope Glycoprotein gp120 Features Four Heparan Sulfate Binding Domains, Including the Co-receptor Binding Site

(2008) Elodie Crublet et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Dynamic Interaction of the Measles Virus Hemagglutinin with Its Receptor Signaling Lymphocytic Activation Molecule (SLAM, CD150)

(2008) Chanakha K. Navaratnarajah et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Combinatorial Optimization of a CD4-Mimetic Miniprotein and Cocrystal Structures with HIV-1 gp120 Envelope Glycoprotein

(2008) François Stricher et al.   JOURNAL OF MOLECULAR BIOLOGY

Identification of Hot Spots in the Variola Virus Complement Inhibitor (SPICE) for Human Complement Regulation

(2008) V. N. Yadav et al.   JOURNAL OF VIROLOGY

The Nucleocapsid Protein of Severe Acute Respiratory Syndrome Coronavirus Inhibits Cell Cytokinesis and Proliferation by Interacting with Translation Elongation Factor 1 

(2008) B. Zhou et al.   JOURNAL OF VIROLOGY

A Single-Amino-Acid Mutation in Hepatitis C Virus NS5A Disrupting FKBP8 Interaction Impairs Viral Replication

(2008) T. Okamoto et al.   JOURNAL OF VIROLOGY

The Human Cytomegalovirus Fc Receptor gp68 Binds the Fc CH2-CH3 Interface of Immunoglobulin G

(2008) E. R. Sprague et al.   JOURNAL OF VIROLOGY

A Novel Strategy for Analyzing RNA-Protein Interactions by Surface Plasmon Resonance Biosensor

(2008) Yaling Yang et al.   MOLECULAR BIOTECHNOLOGY

Polyanionic Drugs and Viral Oncogenesis: a Novel Approach to Control Infection, Tumor-associated Inflammation and Angiogenesis

(2008) Chiara Urbinati et al.   MOLECULES

Structure and Function of A41, a Vaccinia Virus Chemokine Binding Protein

(2008) Mohammad W. Bahar et al.   PLoS Pathogens

Integrins α1β1 and α2β1 are receptors for the rotavirus enterotoxin

(2008) Neung-Seon Seo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A fusion-intermediate state of HIV-1 gp41 targeted by broadly neutralizing antibodies

(2008) G. Frey et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Novel paradigms for drug discovery: computational multitarget screening

(2008) E JENWITHEESUK et al.   TRENDS IN PHARMACOLOGICAL SCIENCES

Epitope mapping and use of epitope-specific antisera to characterize the VP5⁎ binding site in rotavirus SA11 NSP4

(2008) Joseph M. Hyser et al.   VIROLOGY

Hepatitis C virus NS5A protein binds the SH3 domain of the Fyn tyrosine kinase with high affinity: mutagenic analysis of residues within the SH3 domain that contribute to the interaction

(2008) Holly Shelton et al.   Virology Journal

Mechanism of Inhibition of HIV-1 Reverse Transcriptase by the Novel Broad-Range DNA Polymerase InhibitorN-{2-[4-(Aminosulfonyl)phenyl]ethyl}-2-(2-thienyl)acetamide†,‡

(2007) Alon Herschhorn et al.   BIOCHEMISTRY

The function of coreceptor as a basis for the kinetic dissection of HIV type 1 envelope protein-mediated cell fusion

(2007) Miao-Ping Chien et al.   FASEB JOURNAL