Effects of Crossovers Between Homeologs on Inheritance and Population Genomics in Polyploid-Derived Salmonid Fishes

Detection and mapping of QTL for temperature tolerance and body size in Chinook salmon (Oncorhynchus tshawytscha) using genotyping by sequencing

(2014) Meredith V. Everett et al.   Evolutionary Applications

The subtelomeric region is important for chromosome recognition and pairing during meiosis

(2014) María del Carmen Calderón et al.   Scientific Reports

A Dense Linkage Map for Chinook salmon ( Oncorhynchus tshawytscha ) Reveals Variable Chromosomal Divergence After an Ancestral Whole Genome Duplication Event

(2014) Marine S. O. Brieuc et al.   G3-Genes Genomes Genetics

Comparative Mapping Between Coho Salmon (Oncorhynchus kisutch) and Three Other Salmonids Suggests a Role for Chromosomal Rearrangements in the Retention of Duplicated Regions Following a Whole Genome Duplication Event

(2014) M. Kodama et al.   G3-Genes Genomes Genetics

Molecular adaptation of telomere associated genes in mammals

(2013) Claire C Morgan et al.   BMC EVOLUTIONARY BIOLOGY

Chromosome rearrangements, recombination suppression, and limited segregation distortion in hybrids between Yellowstone cutthroat trout (Oncorhynchus clarkii bouvieri) and rainbow trout (O. mykiss)

(2013) Carl O Ostberg et al.   BMC GENOMICS

THE GENETIC ARCHITECTURE OF REPRODUCTIVE ISOLATION DURING SPECIATION-WITH-GENE-FLOW IN LAKE WHITEFISH SPECIES PAIRS ASSESSED BY RAD SEQUENCING

(2013) Pierre-Alexandre Gagnaire et al.   EVOLUTION

Genomic patterns of introgression in rainbow and westslope cutthroat trout illuminated by overlapping paired-end RAD sequencing

(2013) Paul A. Hohenlohe et al.   MOLECULAR ECOLOGY

Thermal adaptation and acclimation of ectotherms from differing aquatic climates

(2013) Shawn R. Narum et al.   MOLECULAR ECOLOGY

A resource of single-nucleotide polymorphisms for rainbow trout generated by restriction-site associated DNA sequencing of doubled haploids

(2013) Yniv Palti et al.   Molecular Ecology Resources

Genetic Architecture of Migration-Related Traits in Rainbow and Steelhead Trout, Oncorhynchus mykis s

(2013) Benjamin C. Hecht et al.   G3-Genes Genomes Genetics

Comparative Genome Mapping Between Chinook Salmon ( Oncorhynchus tshawytscha ) and Rainbow Trout ( O. mykiss ) Based on Homologous Microsatellite Loci

(2013) Kerry A. Naish et al.   G3-Genes Genomes Genetics

Meiotic maps of sockeye salmon derived from massively parallel DNA sequencing

(2012) Meredith V Everett et al.   BMC GENOMICS

Chromosomal differences between European and North American Atlantic salmon discovered by linkage mapping and supported by fluorescence in situ hybridization analysis

(2012) Silje Brenna-Hansen et al.   BMC GENOMICS

Polyploidy and its effect on evolutionary success: old questions revisited with new tools

(2012) A Madlung   HEREDITY

The effects of inheritance in tetraploids on genetic diversity and population divergence

(2012) P G Meirmans et al.   HEREDITY

Relative accuracy of three common methods of parentage analysis in natural populations

(2012) Hugo B. Harrison et al.   MOLECULAR ECOLOGY

Mapping phenotypic, expression and transmission ratio distortion QTL using RAD markers in the Lake Whitefish(Coregonus clupeaformis)

(2012) Pierre-Alexandre Gagnaire et al.   MOLECULAR ECOLOGY

SNP-array reveals genome-wide patterns of geographical and potential adaptive divergence across the natural range of Atlantic salmon (Salmo salar)

(2012) Vincent Bourret et al.   MOLECULAR ECOLOGY

Gene Duplication's Role in Evolution Gets Richer, More Complex

(2012) E. Pennisi   SCIENCE

Genome evolution in the fish family salmonidae: generation of a brook charr genetic map and comparisons among charrs (Arctic charr and brook charr) with rainbow trout

(2011) Evan R Timusk et al.   BMC GENETICS

A dense SNP-based linkage map for Atlantic salmon (Salmo salar) reveals extended chromosome homeologies and striking differences in sex-specific recombination patterns

(2011) Sigbjørn Lien et al.   BMC GENOMICS

Variation in actual relationship as a consequence of Mendelian sampling and linkage

(2011) W.G. HILL et al.   Genetics Research

Genome duplication in amphibians and fish: an extended synthesis

(2011) B. K. Mable et al.   JOURNAL OF ZOOLOGY

A conserved haplotype controls parallel adaptation in geographically distant salmonid populations

(2011) MICHAEL R. MILLER et al.   MOLECULAR ECOLOGY

Short reads and nonmodel species: exploring the complexities of next-generation sequence assembly and SNP discovery in the absence of a reference genome

(2011) M. V. EVERETT et al.   Molecular Ecology Resources

Genetic Analysis of Genome-Scale Recombination Rate Evolution in House Mice

(2011) Beth L. Dumont et al.   PLoS Genetics

Genotype calling and mapping of multisite variants using an Atlantic salmon iSelect SNP array

(2010) Lars Gidskehaug et al.   BIOINFORMATICS

Transcriptome sequencing and high-resolution melt analysis advance single nucleotide polymorphism discovery in duplicated salmonids

(2010) J. E. SEEB et al.   Molecular Ecology Resources

Genomic Runs of Homozygosity Record Population History and Consanguinity

(2010) Mirna Kirin et al.   PLoS One

Hybridization rapidly reduces fitness of a native trout in the wild

(2009) C. C. Muhlfeld et al.   Biology Letters

Assignment of Atlantic salmon (Salmo salar) linkage groups to specific chromosomes: Conservation of large syntenic blocks corresponding to whole chromosome arms in rainbow trout (Oncorhynchus mykiss)

(2009) Ruth B Phillips et al.   BMC GENETICS

EVOLUTION FROM FISH TO MAMMALS BY GENE DUPLICATION

(2009) SUSUMU OHNO et al.   HEREDITAS

Homoeologous recombination in allopolyploids: the polyploid ratchet

(2009) Robert T. Gaeta et al.   NEW PHYTOLOGIST

Surviving the K-T mass extinction: New perspectives of polyploidization in angiosperms

(2009) D. E. Soltis et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A genetic linkage map for coho salmon (Oncorhynchus kisutch)

(2008) E. K. McClelland et al.   ANIMAL GENETICS

A second generation genetic map for rainbow trout (Oncorhynchus mykiss)

(2008) Caird E Rexroad et al.   BMC GENETICS

A salmonid EST genomic study: genes, duplications, phylogeny and microarrays

(2008) Ben F Koop et al.   BMC GENOMICS

Segregation Models for Disomic, Tetrasomic and Intermediate Inheritance in Tetraploids: A General Procedure Applied to Rorippa (Yellow Cress) Microsatellite Data

(2008) M. Stift et al.   GENETICS

Sex-specific crossover patterns in Zebrafish (Danio rerio)

(2008) N Kochakpour et al.   HEREDITY