SNP-array reveals genome-wide patterns of geographical and potential adaptive divergence across the natural range of Atlantic salmon (Salmo salar)

Comparative Genomics Reveals Adaptive Protein Evolution and a Possible Cytonuclear Incompatibility between European and American Eels

(2012) Pierre-Alexandre Gagnaire et al.   MOLECULAR BIOLOGY AND EVOLUTION

Dynamics of introgressive hybridization assessed by SNP population genomics of coding genes in stocked brook charr (Salvelinus fontinalis)

(2012) FABIEN C. LAMAZE et al.   MOLECULAR ECOLOGY

A dense SNP-based linkage map for Atlantic salmon (Salmo salar) reveals extended chromosome homeologies and striking differences in sex-specific recombination patterns

(2011) Sigbjørn Lien et al.   BMC GENOMICS

The Genetic Consequences of Spatially Varying Selection in the Panmictic American Eel ( Anguilla rostrata )

(2011) Pierre-Alexandre Gagnaire et al.   GENETICS

Temporal change in genetic integrity suggests loss of local adaptation in a wild Atlantic salmon (Salmo salar) population following introgression by farmed escapees

(2011) V Bourret et al.   HEREDITY

Extent and scale of local adaptation in salmonid fishes: review and meta-analysis

(2011) D J Fraser et al.   HEREDITY

The coupling hypothesis: why genome scans may fail to map local adaptation genes

(2011) NICOLAS BIERNE et al.   MOLECULAR ECOLOGY

Generic genetic differences between farmed and wild Atlantic salmon identified from a 7K SNP-chip

(2011) STEN KARLSSON et al.   Molecular Ecology Resources

Next-generation RAD sequencing identifies thousands of SNPs for assessing hybridization between rainbow and westslope cutthroat trout

(2011) PAUL A. HOHENLOHE et al.   Molecular Ecology Resources

Evaluation of an Atlantic salmon SNP chip as a genomic tool for the application in a Tasmanian Atlantic salmon (Salmo salar) breeding population

(2010) Sonja Dominik et al.   AQUACULTURE

Genotype calling and mapping of multisite variants using an Atlantic salmon iSelect SNP array

(2010) Lars Gidskehaug et al.   BIOINFORMATICS

Genetic stock identification of Atlantic salmon (Salmo salar) populations in the southern part of the European range

(2010) Andrew M Griffiths et al.   BMC GENETICS

INTEGRATING EVOLUTIONARY AND FUNCTIONAL APPROACHES TO INFER ADAPTATION AT SPECIFIC LOCI

(2010) Jay F. Storz et al.   EVOLUTION

Development of breed identification markers based on a bovine 50K SNP array

(2010) Y. Suekawa et al.   MEAT SCIENCE

Ascertainment Biases in SNP Chips Affect Measures of Population Divergence

(2010) A. Albrechtsen et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genome-wide single nucleotide polymorphisms reveal population history and adaptive divergence in wild guppies

(2010) EVA-MARIA WILLING et al.   MOLECULAR ECOLOGY

Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows

(2010) LAURENT EXCOFFIER et al.   Molecular Ecology Resources

Common SNPs explain a large proportion of the heritability for human height

(2010) Jian Yang et al.   NATURE GENETICS

Parallel adaptive evolution of Atlantic cod on both sides of the Atlantic Ocean in response to temperature

(2010) I. R. Bradbury et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Population Genomics of Parallel Adaptation in Threespine Stickleback using Sequenced RAD Tags

(2010) Paul A. Hohenlohe et al.   PLoS Genetics

BAC-based upgrading and physical integration of a genetic SNP map in Atlantic salmon

(2009) S. Lorenz et al.   ANIMAL GENETICS

Microsatellites reveal clear genetic boundaries among Atlantic salmon (Salmo salar) populations from the Barents and White seas, northwest Russia

(2009) Anni Tonteri et al.   CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES

Spatiotemporal dynamics of the Atlantic salmon (Salmo salar) Greenland fishery inferred from mixed-stock analysis

(2009) Marika Gauthier-Ouellet et al.   CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES

An extended panel of single nucleotide polymorphisms in Atlantic salmon (Salmo salar L.) mitochondrial DNA

(2009) Sten Karlsson et al.   CONSERVATION GENETICS

DISENTANGLING THE EFFECTS OF EVOLUTIONARY, DEMOGRAPHIC, AND ENVIRONMENTAL FACTORS INFLUENCING GENETIC STRUCTURE OF NATURAL POPULATIONS: ATLANTIC HERRING AS A CASE STUDY

(2009) Oscar E. Gaggiotti et al.   EVOLUTION

Population-specific gene expression responses to hybridization between farm and wild Atlantic salmon

(2009) Eric Normandeau et al.   Evolutionary Applications

Detecting loci under selection in a hierarchically structured population

(2009) L Excoffier et al.   HEREDITY

The Genome Response to Artificial Selection: A Case Study in Dairy Cattle

(2009) Laurence Flori et al.   PLoS One

Genome-Wide Survey of SNP Variation Uncovers the Genetic Structure of Cattle Breeds

(2009) et al.   SCIENCE

COMPARING CLINES ON MOLECULAR AND PHENOTYPIC TRAITS IN HYBRID ZONES: A WINDOW ON TENSION ZONE MODELS

(2008) Laurène Gay et al.   EVOLUTION

A Genome-Scan Method to Identify Selected Loci Appropriate for Both Dominant and Codominant Markers: A Bayesian Perspective

(2008) M. Foll et al.   GENETICS

Detrimental effects of recent ocean surface warming on growth condition of Atlantic salmon

(2008) CHRISTOPHER D. TODD et al.   GLOBAL CHANGE BIOLOGY

A Genome Scan to Detect Quantitative Trait Loci for Economically Important Traits in Holstein Cattle Using Two Methods and a Dense Single Nucleotide Polymorphism Map

(2008) H.D. Daetwyler et al.   JOURNAL OF DAIRY SCIENCE

Genetic population structure of European sprat Sprattus sprattus: differentiation across a steep environmental gradient in a small pelagic fish

(2008) MT Limborg et al.   MARINE ECOLOGY PROGRESS SERIES

Landscape genetics and hierarchical genetic structure in Atlantic salmon: the interaction of gene flow and local adaptation

(2008) MÉLANIE DIONNE et al.   MOLECULAR ECOLOGY

High-throughput functional annotation and data mining with the Blast2GO suite

(2008) S. Gotz et al.   NUCLEIC ACIDS RESEARCH

An amino acid polymorphism in the couch potato gene forms the basis for climatic adaptation in Drosophila melanogaster

(2008) P. S. Schmidt et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Global Assessment of Salmon Aquaculture Impacts on Wild Salmonids

(2008) Jennifer S Ford et al.   PLOS BIOLOGY