TRIENNIAL LACTATION SYMPOSIUM: Nutrigenomics in dairy cows: Nutrients, transcription factors, and techniques1,2

Regulation of the vitamin D receptor gene by environment, genetics and epigenetics

(2015) Donovan Saccone et al.   GENE

Thyroid hormone responsive protein spot 14 enhances lipogenesis in bovine mammary epithelial cells

(2015) Yingjun Cui et al.   IN VITRO CELLULAR & DEVELOPMENTAL BIOLOGY-ANIMAL

Specificity Protein 1 Regulates Gene Expression Related to Fatty Acid Metabolism in Goat Mammary Epithelial Cells

(2015) Jiangjiang Zhu et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Maternal nutrition during pregnancy is associated with differential expression of imprinted genes and DNA methyltranfereases in muscle of beef cattle offspring1

(2015) X. Wang et al.   JOURNAL OF ANIMAL SCIENCE

Milk production responses to dietary stearic acid vary by production level in dairy cattle

(2015) P. Piantoni et al.   JOURNAL OF DAIRY SCIENCE

Identification and characterization of microRNA sequences from bovine mammary epithelial cells

(2015) D.P. Bu et al.   JOURNAL OF DAIRY SCIENCE

Body condition score at calving affects systemic and hepatic transcriptome indicators of inflammation and nutrient metabolism in grazing dairy cows

(2015) H. Akbar et al.   JOURNAL OF DAIRY SCIENCE

Saturated fat supplementation interacts with dietary forage neutral detergent fiber content during the immediate postpartum and carryover periods in Holstein cows: Production responses and digestibility of nutrients

(2015) P. Piantoni et al.   JOURNAL OF DAIRY SCIENCE

Evolution of transcription factor function as a mechanism for changing metazoan developmental gene regulatory networks

(2015) Alys M Cheatle Jarvela et al.   EvoDevo

The miRNAome of the postpartum dairy cow liver in negative energy balance

(2014) Attia Fatima et al.   BMC GENOMICS

Maternal nutrition induces gene expression changes in fetal muscle and adipose tissues in sheep

(2014) Francisco Peñagaricano et al.   BMC GENOMICS

Cationic Lipids as Transfecting Agents of DNA in Gene Therapy

(2014) Elena Junquera et al.   CURRENT TOPICS IN MEDICINAL CHEMISTRY

Genome-wide DNA methylation variability in adolescent monozygotic twins followed since birth

(2014) Mélissa L Lévesque et al.   Epigenetics

Function of SREBP1 in the Milk Fat Synthesis of Dairy Cow Mammary Epithelial Cells

(2014) Nan Li et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Short communication: Effect of trans-10,cis-12 conjugated linoleic acid on activation of lipogenic transcription factors in bovine mammary epithelial cells

(2014) L. Ma et al.   JOURNAL OF DAIRY SCIENCE

Postpartal immunometabolic gene network expression and function in blood neutrophils are altered in response to prepartal energy intake and postpartal intramammary inflammatory challenge1

(2014) K.M. Moyes et al.   JOURNAL OF DAIRY SCIENCE

Invited review: Palmitic and stearic acid metabolism in lactating dairy cows

(2014) J.R. Loften et al.   JOURNAL OF DAIRY SCIENCE

Rosiglitazone, a PPAR-γ Agonist, Fails to Attenuate CLA-Induced Milk Fat Depression and Hepatic Lipid Accumulation in Lactating Mice

(2014) Diwakar Vyas et al.   LIPIDS

Evolution of transcription factor binding in metazoans — mechanisms and functional implications

(2014) Diego Villar et al.   NATURE REVIEWS GENETICS

Transcriptional enhancers: from properties to genome-wide predictions

(2014) Daria Shlyueva et al.   NATURE REVIEWS GENETICS

AnimalTFDB 2.0: a resource for expression, prediction and functional study of animal transcription factors

(2014) Hong-Mei Zhang et al.   NUCLEIC ACIDS RESEARCH

The role of vitamins and minerals in modulating the expression of microRNA

(2014) Emma L. Beckett et al.   NUTRITION RESEARCH REVIEWS

Ratio of lysine to methionine alters expression of genes involved in milk protein transcription and translation and mTOR phosphorylation in bovine mammary cells

(2014) Xuemei Nan et al.   PHYSIOLOGICAL GENOMICS

Effects of Arginine Concentration on the In Vitro Expression of Casein and mTOR Pathway Related Genes in Mammary Epithelial Cells from Dairy Cattle

(2014) Mengzhi Wang et al.   PLoS One

Integrative Analyses of Hepatic Differentially Expressed Genes and Blood Biomarkers during the Peripartal Period between Dairy Cows Overfed or Restricted-Fed Energy Prepartum

(2014) Khuram Shahzad et al.   PLoS One

DNA Methylation and Transcription in a Distal Region Upstream from the Bovine AlphaS1 Casein Gene after Once or Twice Daily Milking

(2014) Minh Nguyen et al.   PLoS One

Dietary Fat Supplementation and the Consequences for Oocyte and Embryo Quality: Hype or Significant Benefit for Dairy Cow Reproduction?

(2014) JLMR Leroy et al.   REPRODUCTION IN DOMESTIC ANIMALS

Effects of short- and long-chain fatty acids on the expression of stearoyl-CoA desaturase and other lipogenic genes in bovine mammary epithelial cells

(2013) A. A. A. Jacobs et al.   Animal

Characteristics of Bovine Inner Cell Mass-Derived Cell Lines and Their Fate in Chimeric Conceptuses1

(2013) Tadashi Furusawa et al.   BIOLOGY OF REPRODUCTION

Hepatic glucose sensing and integrative pathways in the liver

(2013) Maaike H. Oosterveer et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Short-Chain Fatty Acids Inhibit Growth Hormone and Prolactin Gene Transcription via cAMP/PKA/CREB Signaling Pathway in Dairy Cow Anterior Pituitary Cells

(2013) Jian-Fa Wang et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Gene expression analysis of protein synthesis pathways in bovine mammary epithelial cells purified from milk during lactation and short-term restricted feeding

(2013) T. Sigl et al.   JOURNAL OF ANIMAL PHYSIOLOGY AND ANIMAL NUTRITION

COMPANION ANIMALS SYMPOSIUM: Nutrigenomics: Using gene expression and molecular biology data to understand pet obesity1

(2013) M. R. C. de Godoy et al.   JOURNAL OF ANIMAL SCIENCE

Feed restriction, but not l -carnitine infusion, alters the liver transcriptome by inhibiting sterol synthesis and mitochondrial oxidative phosphorylation and increasing gluconeogenesis in mid-lactation dairy cows

(2013) H. Akbar et al.   JOURNAL OF DAIRY SCIENCE

Conjugated linoleic acid-induced milk fat depression in lactating ewes is accompanied by reduced expression of mammary genes involved in lipid synthesis1

(2013) M. Hussein et al.   JOURNAL OF DAIRY SCIENCE

Short communication: A mutation in the 3′ untranslated region diminishes microRNA binding and alters expression of the OLR1 gene

(2013) X. Wang et al.   JOURNAL OF DAIRY SCIENCE

Effect of the level of maternal energy intake prepartum on immunometabolic markers, polymorphonuclear leukocyte function, and neutrophil gene network expression in neonatal Holstein heifer calves1

(2013) J.S. Osorio et al.   JOURNAL OF DAIRY SCIENCE

Increased papillae growth and enhanced short-chain fatty acid absorption in the rumen of goats are associated with transient increases in cyclin D1 expression after ruminal butyrate infusion

(2013) Moolchand Malhi et al.   JOURNAL OF DAIRY SCIENCE

Effects of AMP-activated protein kinase (AMPK) signaling and essential amino acids on mammalian target of rapamycin (mTOR) signaling and protein synthesis rates in mammary cells

(2013) J.A.D.R.N. Appuhamy et al.   JOURNAL OF DAIRY SCIENCE

A commonly used rumen-protected conjugated linoleic acid supplement marginally affects fatty acid distribution of body tissues and gene expression of mammary gland in heifers during early lactation

(2013) Ronny Kramer et al.   Lipids in Health and Disease

Nutritional models of foetal programming and nutrigenomic and epigenomic dysregulations of fatty acid metabolism in the liver and heart

(2013) Jean-Louis Guéant et al.   PFLUGERS ARCHIV-EUROPEAN JOURNAL OF PHYSIOLOGY

Reducing milking frequency during nutrient restriction has no effect on the hepatic transcriptome of lactating dairy cattle

(2013) T. M. Grala et al.   PHYSIOLOGICAL GENOMICS

Effect of Maternal Methionine Supplementation on the Transcriptome of Bovine Preimplantation Embryos

(2013) Francisco Peñagaricano et al.   PLoS One

Regulation of energy metabolism by long-chain fatty acids

(2013) Manabu T. Nakamura et al.   PROGRESS IN LIPID RESEARCH

PPARγRegulates Genes Involved in Triacylglycerol Synthesis and Secretion in Mammary Gland Epithelial Cells of Dairy Goats

(2013) Hengbo Shi et al.   PPAR Research

Functional Role of PPARs in Ruminants: Potential Targets for Fine-Tuning Metabolism during Growth and Lactation

(2013) Massimo Bionaz et al.   PPAR Research

Nuclear Control of the Inflammatory Response in Mammals by Peroxisome Proliferator-Activated Receptors

(2013) Stéphane Mandard et al.   PPAR Research

The gut microbiota suppresses insulin-mediated fat accumulation via the short-chain fatty acid receptor GPR43

(2013) Ikuo Kimura et al.   Nature Communications

Systems Physiology in Dairy Cattle: Nutritional Genomics and Beyond

(2013) Juan J. Loor et al.   Annual Review of Animal Biosciences

Nutritional factors and gender influence age-related DNA methylation in the human rectal mucosa

(2012) Henri S. Tapp et al.   AGING CELL

The role of omega-3 polyunsaturated fatty acids in reproduction of sheep and cattle

(2012) C.E. Gulliver et al.   ANIMAL REPRODUCTION SCIENCE

Expression profiles of microRNAs from lactating and non-lactating bovine mammary glands and identification of miRNA related to lactation

(2012) Zhen Li et al.   BMC GENOMICS

Increase of Fatty Acid Oxidation and VLDL Assembly and Secretion Overexpression of PTEN in Cultured Hepatocytes of Newborn Calf

(2012) Shixin Fu et al.   CELLULAR PHYSIOLOGY AND BIOCHEMISTRY

Goat liver X receptor α, molecular cloning, functional characterization and regulating fatty acid synthesis in epithelial cells of goat mammary glands

(2012) Wei Wang et al.   GENE

Ligand-dependent nucleo-cytoplasmic shuttling of peroxisome proliferator-activated receptors, PPARα and PPARγ

(2012) Tomoe Umemoto et al.   GENES TO CELLS

Multiparous cows categorized by milk protein concentration and energy-corrected milk yield during early lactation - metabolism, productivity and effect of a short-term feed restriction

(2012) T. Sigl et al.   JOURNAL OF ANIMAL PHYSIOLOGY AND ANIMAL NUTRITION

Transcriptional regulation of lipid synthesis in bovine mammary epithelial cells by sterol regulatory element binding protein-1

(2012) L. Ma et al.   JOURNAL OF DAIRY SCIENCE

Effect of prepartum maternal energy density on the growth performance, immunity, and antioxidation capability of neonatal calves

(2012) F. Gao et al.   JOURNAL OF DAIRY SCIENCE

Regulation of lipid synthesis by liver X receptor α and sterol regulatory element-binding protein 1 in mammary epithelial cells

(2012) C. Oppi-Williams et al.   JOURNAL OF DAIRY SCIENCE

How Selected Tissues of Lactating Holstein Cows Respond to Dietary Polyunsaturated Fatty Acid Supplementation

(2012) Beate Hiller et al.   LIPIDS

Transcriptional integration of metabolism by the nuclear sterol-activated receptors LXR and FXR

(2012) Anna C. Calkin et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Alternative Splicing Regulated by Butyrate in Bovine Epithelial Cells

(2012) Sitao Wu et al.   PLoS One

Transcriptome Characterization by RNA-seq Unravels the Mechanisms of Butyrate-Induced Epigenomic Regulation in Bovine Cells

(2012) Sitao Wu et al.   PLoS One

Exposure to DNA is insufficient for in vitro transgenesis of live bovine sperm and embryos

(2012) Shahin Eghbalsaied et al.   REPRODUCTION

The Impact of Nutrition on Differential Methylated Regions of the Genome

(2012) Anne Parle-McDermott et al.   Advances in Nutrition

The Transcription Factor Network Associated With the Amino Acid Response in Mammalian Cells

(2012) Michael S. Kilberg et al.   Advances in Nutrition

Mechanisms of Gene Regulation by Fatty Acids

(2012) Anastasia Georgiadi et al.   Advances in Nutrition

Classification of human genomic regions based on experimentally determined binding sites of more than 100 transcription-related factors

(2012) Kevin Y Yip et al.   GENOME BIOLOGY

Epigenetics: a possible role in acute and transgenerational regulation of dairy cow milk production

(2011) K. Singh et al.   Animal

Nutrigenomics, Rumen-Derived Bioactive Fatty Acids, and the Regulation of Milk Fat Synthesis

(2011) Dale E. Bauman et al.   Annual Review of Nutrition

Oleic acid induces intracellular calcium mobilization, MAPK phosphorylation, superoxide production and granule release in bovine neutrophils

(2011) Maria A. Hidalgo et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Nuclear receptor PXR, transcriptional circuits and metabolic relevance

(2011) Chibueze A. Ihunnah et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE

Fine metabolic regulation in ruminants via nutrient–gene interactions: saturated long-chain fatty acids increase expression of genes involved in lipid metabolism and immune response partly through PPAR-α activation

(2011) Massimo Bionaz et al.   BRITISH JOURNAL OF NUTRITION

Liver X Receptor: an oxysterol sensor and a major player in the control of lipogenesis

(2011) S. Ducheix et al.   CHEMISTRY AND PHYSICS OF LIPIDS

Plasma FGF21 Is Elevated by the Intense Lipid Mobilization of Lactation

(2011) Katie M. Schoenberg et al.   ENDOCRINOLOGY

Differential effects of propionate or β-hydroxybutyrate on genes related to energy balance and insulin sensitivity in bovine white adipose tissue explants from a subcutaneous and a visceral depot1

(2011) A. Hosseini et al.   JOURNAL OF ANIMAL PHYSIOLOGY AND ANIMAL NUTRITION

RUMINANT NUTRITION SYMPOSIUM: OPTIMIZING PERFORMANCE OF THE OFFSPRING: Nourishing and managing the dam and postnatal calf for optimal lactation, reproduction, and immunity1,2

(2011) A. Bach   JOURNAL OF ANIMAL SCIENCE

Dietary lipid during the transition period to manipulate subcutaneous adipose tissue peroxisome proliferator-activated receptor-γ co-regulator and target gene expression

(2011) E. Schmitt et al.   JOURNAL OF DAIRY SCIENCE

Differential regulation of bovine pyruvate carboxylase promoters by fatty acids and peroxisome proliferator-activated receptor-α agonist1

(2011) H.M. White et al.   JOURNAL OF DAIRY SCIENCE

Effects of plane of nutrition and 2,4-thiazolidinedione on insulin responses and adipose tissue gene expression in dairy cattle during late gestation

(2011) K.M. Schoenberg et al.   JOURNAL OF DAIRY SCIENCE

Effect of a supplement containing trans-10,cis-12 conjugated linoleic acid on the performance of dairy ewes fed 2 levels of metabolizable protein and at a restricted energy intake

(2011) W.M.P.B. Weerasinghe et al.   JOURNAL OF DAIRY SCIENCE

Rumen epithelial adaptation to high-grain diets involves the coordinated regulation of genes involved in cholesterol homeostasis

(2011) Michael A. Steele et al.   PHYSIOLOGICAL GENOMICS

Nutrient intake in the bovine during early and mid-gestation causes sex-specific changes in progeny plasma IGF-I, liveweight, height and carcass traits

(2010) G.C. Micke et al.   ANIMAL REPRODUCTION SCIENCE

Nutrition, Epigenetics, and Developmental Plasticity: Implications for Understanding Human Disease

(2010) Graham C. Burdge et al.   Annual Review of Nutrition

A recombinant peroxisome proliferator response element-driven luciferase assay for evaluation of potential environmental obesogens

(2010) Ya-Fen Wang et al.   BIOTECHNOLOGY LETTERS

Sustained upregulation of stearoyl-CoA desaturase in bovine mammary tissue with contrasting changes in milk fat synthesis and lipogenic gene networks caused by lipid supplements

(2010) Guido Invernizzi et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Effects of the peroxisome proliferator-activated receptor-α agonists clofibrate and fish oil on hepatic fatty acid metabolism in weaned dairy calves1

(2010) N.B. Litherland et al.   JOURNAL OF DAIRY SCIENCE

Short communication: Identification of the bovine sterol regulatory element binding protein-1c promoter and its activation by liver X receptor1

(2010) A.J. Lengi et al.   JOURNAL OF DAIRY SCIENCE

Activation of liver X receptor (LXR) enhances de novo fatty acid synthesis in bovine mammary epithelial cells

(2010) J.W. McFadden et al.   JOURNAL OF DAIRY SCIENCE

Prepartum dietary management of energy intake affects postpartum intake and lactation performance by primiparous and multiparous Holstein cows1

(2010) N.A. Janovick et al.   JOURNAL OF DAIRY SCIENCE

Identification of Ubxd8 protein as a sensor for unsaturated fatty acids and regulator of triglyceride synthesis

(2010) J. N. Lee et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Activation of Pregnane X Receptor (PXR) and Constitutive Androstane Receptor (CAR) by Herbal Medicines

(2009) Thomas K. H. Chang   AAPS Journal

A new player in the orchestra of cell growth: SREBP activity is regulated by mTORC1 and contributes to the regulation of cell and organ size

(2009) Thomas Porstmann et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

Gene network and pathway analysis of bovine mammary tissue challenged with Streptococcus uberis reveals induction of cell proliferation and inhibition of PPARγ signaling as potential mechanism for the negative relationships between immune response and lipid metabolism

(2009) Kasey M Moyes et al.   BMC GENOMICS

Transition period-related changes in the abundance of the mRNAs of adiponectin and its receptors, of visfatin, and of fatty acid binding receptors in adipose tissue of high-yielding dairy cows

(2009) Anneka Lemor et al.   DOMESTIC ANIMAL ENDOCRINOLOGY

Metabolism and lactation performance in dairy cows fed a diet containing rumen-protected fat during the last twelve weeks of gestation

(2009) K. Duske et al.   JOURNAL OF DAIRY SCIENCE

Adipose tissue lipogenic gene networks due to lipid feeding and milk fat depression in lactating cows

(2009) B.J. Thering et al.   JOURNAL OF DAIRY SCIENCE

Hepatic gene expression in multiparous Holstein cows treated with bovine somatotropin and fed n-3 fatty acids in early lactation

(2009) M. Carriquiry et al.   JOURNAL OF DAIRY SCIENCE

Peroxisome proliferator-activated receptor-γ activation and long-chain fatty acids alter lipogenic gene networks in bovine mammary epithelial cells to various extents

(2009) A.K.G. Kadegowda et al.   JOURNAL OF DAIRY SCIENCE

Long-chain fatty acid effects on peroxisome proliferator-activated receptor-α-regulated genes in Madin-Darby bovine kidney cells: Optimization of culture conditions using palmitate

(2009) B.J. Thering et al.   JOURNAL OF DAIRY SCIENCE

Identification and characterization of the bovine G protein-coupled receptor GPR41 and GPR43 genes

(2009) A. Wang et al.   JOURNAL OF DAIRY SCIENCE

Liver X receptor in cholesterol metabolism

(2009) Chunyan Zhao et al.   JOURNAL OF ENDOCRINOLOGY

A census of human transcription factors: function, expression and evolution

(2009) Juan M. Vaquerizas et al.   NATURE REVIEWS GENETICS

Nutrition, immunology, and genetics: future perspectives

(2009) Rubhana Raqib et al.   NUTRITION REVIEWS

Unsaturated fatty acids promote proliferation via ERK1/2 and Akt pathway in bovine mammary epithelial cells

(2008) Tomo Yonezawa et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Gene networks driving bovine milk fat synthesis during the lactation cycle

(2008) Massimo Bionaz et al.   BMC GENOMICS

SREBP Activity Is Regulated by mTORC1 and Contributes to Akt-Dependent Cell Growth

(2008) Thomas Porstmann et al.   Cell Metabolism

IGF-I, EGF, and sex steroids regulate autophagy in bovine mammary epithelial cells via the mTOR pathway

(2008) Agnieszka Sobolewska et al.   EUROPEAN JOURNAL OF CELL BIOLOGY

Milking and Feed Restriction Regulate Transcripts of Mammary Epithelial Cells Purified from Milk

(2008) M. Boutinaud et al.   JOURNAL OF DAIRY SCIENCE

Short Communication: Characterization of Madin-Darby Bovine Kidney Cell Line for Peroxisome Proliferator-Activated Receptors: Temporal Response and Sensitivity to Fatty Acids

(2008) M. Bionaz et al.   JOURNAL OF DAIRY SCIENCE

Effects of short-term infusion with propionate on the mRNA expression of a putative G-protein coupled receptor 41 (GPR41) in adipose tissue of goats

(2008) Manfred Mielenz et al.   Livestock Science

Vitamin D receptor: molecular signaling and actions of nutritional ligands in disease prevention

(2008) Mark R Haussler et al.   NUTRITION REVIEWS

Short-chain fatty acid signaling pathways in bovine mammary epithelial cells

(2008) Tomo Yonezawa et al.   REGULATORY PEPTIDES

Long Chain Fatty Acids of Diet as Factors Influencing Reproduction in Cattle

(2008) JEP Santos et al.   REPRODUCTION IN DOMESTIC ANIMALS

Lactose and lactose derivatives as bioactive ingredients in human nutrition

(2007) Gertjan Schaafsma   INTERNATIONAL DAIRY JOURNAL

Growth Hormone Can Induce Expression of Four Major Milk Protein Genes in Transfected MAC-T Cells

(2007) Y. Zhou et al.   JOURNAL OF DAIRY SCIENCE

Cloning the Genomic Sequence and Identification of Promoter Regions of Bovine Pyruvate Carboxylase

(2007) S.R. Hazelton et al.   JOURNAL OF DAIRY SCIENCE