Deciphering bacterial xylose metabolism and metabolic engineering of industrial microorganisms for use as efficient microbial cell factories

Engineering Escherichia coli for glycolic acid production from D-xylose through the Dahms pathway and glyoxylate bypass

(2018) Rhudith B. Cabulong et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

The myo -inositol/proton symporter IolT1 contributes to d -xylose uptake in Corynebacterium glutamicum

(2018) Christian Brüsseler et al.   BIORESOURCE TECHNOLOGY

Engineering Escherichia coli to grow constitutively on D-xylose using the carbon-efficient Weimberg pathway

(2018) Luca Rossoni et al.   MICROBIOLOGY-SGM

Systems assessment of transcriptional regulation on central carbon metabolism by Cra and CRP

(2018) Donghyuk Kim et al.   NUCLEIC ACIDS RESEARCH

Construction and evolution of anEscherichia colistrain relying on nonoxidative glycolysis for sugar catabolism

(2018) Paul P. Lin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Exploring d-xylose oxidation in Saccharomyces cerevisiae through the Weimberg pathway

(2018) Lisa Wasserstrom et al.   AMB Express

Modular pathway engineering of Corynebacterium glutamicum to improve xylose utilization and succinate production

(2017) Suah Jo et al.   JOURNAL OF BIOTECHNOLOGY

The CRISPR/Cas9-facilitated multiplex pathway optimization (CFPO) technique and its application to improve the Escherichia coli xylose utilization pathway

(2017) Xinna Zhu et al.   METABOLIC ENGINEERING

Revealing genome-scale transcriptional regulatory landscape of OmpR highlights its expanded regulatory roles under osmotic stress in Escherichia coli K-12 MG1655

(2017) Sang Woo Seo et al.   Scientific Reports

Investigation of the Synergetic Effect of Xylose Metabolic Pathways on the Production of Glutaric Acid

(2017) Jia Wang et al.   ACS Synthetic Biology

Engineering of Corynebacterium glutamicum for Consolidated Conversion of Hemicellulosic Biomass into Xylonic Acid

(2017) Sung Sun Yim et al.   Biotechnology Journal

Engineering the xylose-catabolizing Dahms pathway for production of poly(d -lactate-co -glycolate) and poly(d -lactate-co -glycolate-co -d -2-hydroxybutyrate) in Escherichia coli

(2017) So Young Choi et al.   Microbial Biotechnology

The synthetic xylulose-1 phosphate pathway increases production of glycolic acid from xylose-rich sugar mixtures

(2016) Ceren Alkim et al.   Biotechnology for Biofuels

Engineering Cellular Metabolism

(2016) Jens Nielsen et al.   CELL

Engineering of Corynebacterium glutamicum for xylitol production from lignocellulosic pentose sugars

(2016) Kiran S. Dhar et al.   JOURNAL OF BIOTECHNOLOGY

Formation of xylitol and xylitol-5-phosphate and its impact on growth of d -xylose-utilizing Corynebacterium glutamicum strains

(2016) Andreas Radek et al.   JOURNAL OF BIOTECHNOLOGY

Efficient utilization of pentoses for bioproduction of the renewable two-carbon compounds ethylene glycol and glycolate

(2016) Brian Pereira et al.   METABOLIC ENGINEERING

One-step fermentative production of poly(lactate-co-glycolate) from carbohydrates in Escherichia coli

(2016) So Young Choi et al.   NATURE BIOTECHNOLOGY

The EcoCyc database: reflecting new knowledge aboutEscherichia coliK-12

(2016) Ingrid M. Keseler et al.   NUCLEIC ACIDS RESEARCH

Modular Optimization of a Hemicellulose-Utilizing Pathway in Corynebacterium glutamicum for Consolidated Bioprocessing of Hemicellulosic Biomass

(2016) Sung Sun Yim et al.   ACS Synthetic Biology

Bypassing the Pentose Phosphate Pathway: Towards Modular Utilization of Xylose

(2016) Kulika Chomvong et al.   PLoS One

Phosphoketolase pathway engineering for carbon-efficient biocatalysis

(2015) Calvin Andrew Henard et al.   CURRENT OPINION IN BIOTECHNOLOGY

Combining C6 and C5 sugar metabolism for enhancing microbial bioconversion

(2015) Guo-Chang Zhang et al.   CURRENT OPINION IN CHEMICAL BIOLOGY

Decoding genome-wide GadEWX-transcriptional regulatory networks reveals multifaceted cellular responses to acid stress in Escherichia coli

(2015) Sang Woo Seo et al.   Nature Communications

Engineering of a Synthetic Metabolic Pathway for the Assimilation of (d)-Xylose into Value-Added Chemicals

(2015) Yvan Cam et al.   ACS Synthetic Biology

Genome-wide Reconstruction of OxyR and SoxRS Transcriptional Regulatory Networks under Oxidative Stress in Escherichia coli K-12 MG1655

(2015) Sang Woo Seo et al.   Cell Reports

Metabolic engineering for improved production of ethanol by Corynebacterium glutamicum

(2014) Toru Jojima et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Fatty acid synthesis in Escherichia coli and its applications towards the production of fatty acid based biofuels

(2014) Helge Janßen et al.   Biotechnology for Biofuels

Genome-scale metabolic reconstructions of Bifidobacterium adolescentis L2-32 and Faecalibacterium prausnitzii A2-165 and their interaction

(2014) Ibrahim E El-Semman et al.   BMC Systems Biology

Engineering of Corynebacterium glutamicum for minimized carbon loss during utilization of d-xylose containing substrates

(2014) Andreas Radek et al.   JOURNAL OF BIOTECHNOLOGY

Nonenzymatic Sugar Production from Biomass Using Biomass-Derived  -Valerolactone

(2014) J. S. Luterbacher et al.   SCIENCE

Deciphering Fur transcriptional regulatory network highlights its complex role beyond iron metabolism in Escherichia coli

(2014) Sang Woo Seo et al.   Nature Communications

Systems metabolic engineering of xylose-utilizingCorynebacterium glutamicumfor production of 1,5-diaminopentane

(2013) Nele Buschke et al.   Biotechnology Journal

Synthetic non-oxidative glycolysis enables complete carbon conservation

(2013) Igor W. Bogorad et al.   NATURE

Microbial production of short-chain alkanes

(2013) Yong Jun Choi et al.   NATURE

Phosphoketolase Pathway for Xylose Catabolism in Clostridium acetobutylicum Revealed by 13C Metabolic Flux Analysis

(2012) L. Liu et al.   JOURNAL OF BACTERIOLOGY

Simultaneous co-fermentation of mixed sugars: a promising strategy for producing cellulosic ethanol

(2012) Soo Rin Kim et al.   TRENDS IN BIOTECHNOLOGY

Metabolic engineering: enabling technology of a bio-based economy

(2012) Jie Zhang et al.   Current Opinion in Chemical Engineering

Accelerated pentose utilization byCorynebacterium glutamicumfor accelerated production of lysine, glutamate, ornithine and putrescine

(2012) Tobias M. Meiswinkel et al.   Microbial Biotechnology

Comparative performance of precommercial cellulases hydrolyzing pretreated corn stover

(2011) James D McMillan et al.   Biotechnology for Biofuels

Metabolic engineering of Corynebacterium glutamicum for production of 1,5-diaminopentane from hemicellulose

(2011) Nele Buschke et al.   Biotechnology Journal

A comprehensive genome-scale reconstruction of Escherichia coli metabolism--2011

(2011) J. D. Orth et al.   Molecular Systems Biology

Microbial production of fatty-acid-derived fuels and chemicals from plant biomass

(2010) Eric J. Steen et al.   NATURE

Integrated Catalytic Conversion of  -Valerolactone to Liquid Alkenes for Transportation Fuels

(2010) J. Q. Bond et al.   SCIENCE

Improved Production of Homo-D-Lactic Acid via Xylose Fermentation by Introduction of Xylose Assimilation Genes and Redirection of the Phosphoketolase Pathway to the Pentose Phosphate Pathway in L-Lactate Dehydrogenase Gene-Deficient Lactobacillus plantarum

(2009) K. Okano et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Xylitol production by recombinant Corynebacterium glutamicum under oxygen deprivation

(2009) Miho Sasaki et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Sugar transporters in efficient utilization of mixed sugar substrates: current knowledge and outlook

(2009) Toru Jojima et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Engineering of pentose transport in Corynebacterium glutamicum to improve simultaneous utilization of mixed sugars

(2009) Miho Sasaki et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

iBsu1103: a new genome-scale metabolic model of Bacillus subtilis based on SEED annotations

(2009) Christopher S Henry et al.   GENOME BIOLOGY

In silico genome-scale reconstruction and validation of theCorynebacterium glutamicummetabolic network

(2008) Kjeld Raunkjaer Kjeldsen et al.   BIOTECHNOLOGY AND BIOENGINEERING