Survival and Energy Producing Strategies of Alkane Degraders Under Extreme Conditions and Their Biotechnological Potential

Free-living chemoautotrophic and particle-attached heterotrophic prokaryotes dominate microbial assemblages along a pelagic redox gradient

(2017) Elizabeth A. Suter et al.   ENVIRONMENTAL MICROBIOLOGY

Thermal adaptation strategies of the extremophile bacterium Thermus filiformis based on multi-omics analysis

(2017) F. Mandelli et al.   EXTREMOPHILES

Microaerophilic alkane degradation in Pseudomonas extremaustralis: a transcriptomic and physiological approach

(2017) Paula M. Tribelli et al.   JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY

Bioremediation of hydrocarbon-contaminated soils in cold regions: Development of a pre-optimized biostimulation biopile-scale field assay in Antarctica

(2017) LM Martínez Álvarez et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Biotechnologies for Marine Oil Spill Cleanup: Indissoluble Ties with Microorganisms

(2017) Francesca Mapelli et al.   TRENDS IN BIOTECHNOLOGY

Reverse Methanogenesis and Respiration in Methanotrophic Archaea

(2017) Peer H. A. Timmers et al.   ARCHAEA-AN INTERNATIONAL MICROBIOLOGICAL JOURNAL

Effective bioremediation of a petroleum-polluted saline soil by a surfactant-producing Pseudomonas aeruginosa consortium

(2017) Ali Ebadi et al.   Journal of Advanced Research

Metabolic and stress responses of Acinetobacter oleivorans DR1 during long-chain alkane degradation

(2017) Chulwoo Park et al.   Microbial Biotechnology

Coevolution with bacteria drives the evolution of aerobic fermentation in Lachancea kluyveri

(2017) Nerve Zhou et al.   PLoS One

Calcium (II) - and dipicolinic acid mediated-biostimulation of oil-bioremediation under multiple stresses by heat, oil and heavy metals

(2017) Samir S. Radwan et al.   Scientific Reports

Proteomic and transcriptomic investigations on cold-responsive properties of the psychrophilic Antarctic bacteriumPsychrobactersp. PAMC 21119 at subzero temperatures

(2016) Hye Yeon Koh et al.   ENVIRONMENTAL MICROBIOLOGY

Heterotrophic Proteobacteria in the vicinity of diffuse hydrothermal venting

(2016) Dimitri V. Meier et al.   ENVIRONMENTAL MICROBIOLOGY

Role of Glyoxylate Shunt in Oxidative Stress Response

(2016) Sungeun Ahn et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Short- and medium-chain fatty acids in energy metabolism: the cellular perspective

(2016) Peter Schönfeld et al.   JOURNAL OF LIPID RESEARCH

Detection of n-alkane biodegradation genes alkB and ladA in thermophilic hydrocarbon-oxidizing bacteria of the genera Aeribacillus and Geobacillus

(2016) T. P. Tourova et al.   MICROBIOLOGY

Thermophilic archaea activate butane via alkyl-coenzyme M formation

(2016) Rafael Laso-Pérez et al.   NATURE

Halophiles: biology, adaptation, and their role in decontamination of hypersaline environments

(2016) Mohamed Faraj Edbeib et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Osmotic Stress Confers Enhanced Cell Integrity to Hydrostatic Pressure but Impairs Growth in Alcanivorax borkumensis SK2

(2016) Alberto Scoma et al.   Frontiers in Microbiology

Fate and transport of petroleum hydrocarbons in engineered biopiles in polar regions

(2015) M.J. Whelan et al.   CHEMOSPHERE

The effect of oil spills on the bacterial diversity and catabolic function in coastal sediments: a case study on the Prestige oil spill

(2015) Alejandro Acosta-González et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Moderately thermophilic, hydrocarbonoclastic bacterial communities in Kuwaiti desert soil: enhanced activity via Ca2+ and dipicolinic acid amendment

(2015) D. M. Al-Mailem et al.   EXTREMOPHILES

Comparative analysis of metagenomes from three methanogenic hydrocarbon-degrading enrichment cultures with 41 environmental samples

(2015) Boonfei Tan et al.   ISME Journal

Anaerobic oxidation of methane associated with sulfate reduction in a natural freshwater gas source

(2015) Peer HA Timmers et al.   ISME Journal

Cold-adapted bacteria for bioremediation of crude oil-contaminated soil

(2015) Jingxiu Wang et al.   JOURNAL OF CHEMICAL TECHNOLOGY AND BIOTECHNOLOGY

Regulation of alkane degradation pathway by a TetR family repressor via an autoregulation positive feedback mechanism in a Gram-positiveDietziabacterium

(2015) Jie-Liang Liang et al.   MOLECULAR MICROBIOLOGY

The Survival Mechanisms of Thermophiles at High Temperatures: An Angle of Omics

(2015) Quanhui Wang et al.   PHYSIOLOGY

Potential Role of Acetyl-CoA Synthetase (acs) and Malate Dehydrogenase (mae) in the Evolution of the Acetate Switch in Bacteria and Archaea

(2015) Elliott P. Barnhart et al.   Scientific Reports

The “Oil-Spill Snorkel”: an innovative bioelectrochemical approach to accelerate hydrocarbons biodegradation in marine sediments

(2015) Carolina Cruz Viggi et al.   Frontiers in Microbiology

Alkane hydroxylase genes in psychrophile genomes and the potential for cold active catalysis

(2015) Jeff S Bowman et al.   BMC GENOMICS

The Geoglobus acetivorans Genome: Fe(III) Reduction, Acetate Utilization, Autotrophic Growth, and Degradation of Aromatic Compounds in a Hyperthermophilic Archaeon

(2014) Andrey V. Mardanov et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Cloning and expression of three ladA-type alkane monooxygenase genes from an extremely thermophilic alkane-degrading bacterium Geobacillus thermoleovorans B23

(2014) Chanita Boonmak et al.   EXTREMOPHILES

Optimization of field scale biopiles for bioremediation of petroleum hydrocarbon contaminated soil at low temperature conditions by response surface methodology (RSM)

(2014) Francisco Gomez et al.   INTERNATIONAL BIODETERIORATION & BIODEGRADATION

Anaerobic oxidation of long-chain n-alkanes by the hyperthermophilic sulfate-reducing archaeon, Archaeoglobus fulgidus

(2014) Nadia Khelifi et al.   ISME Journal

Diverse sulfate-reducing bacteria of the Desulfosarcina/Desulfococcus clade are the key alkane degraders at marine seeps

(2014) Sara Kleindienst et al.   ISME Journal

Hydrocarbon-oxidizing potential and the genes for n-alkane biodegradation in a new acidophilic mycobacterial association from sulfur blocks

(2014) A. E. Ivanova et al.   MICROBIOLOGY

Hydrocarbon removal and bacterial community structure in on-site biostimulated biopile systems designed for bioremediation of diesel-contaminated Antarctic soil

(2014) Romina L. Dias et al.   POLAR BIOLOGY

Diverse alkane hydroxylase genes in microorganisms and environments

(2014) Yong Nie et al.   Scientific Reports

A novel mechanism of protein thermostability: a unique N-terminal domain confers heat resistance to Fe/Mn-SODs

(2014) Wei Wang et al.   Scientific Reports

Conversion of crude oil to methane by a microbial consortium enriched from oil reservoir production waters

(2014) Carolina Berdugo-Clavijo et al.   Frontiers in Microbiology

Degradation of Millimolar Concentration of the Herbicide Dalapon (2,2-Dichloropropionic Acid) byRhizobiumSp. Isolated from Soil

(2013) Fahrul Huyop et al.   BIOTECHNOLOGY & BIOTECHNOLOGICAL EQUIPMENT

Evidence that crude oil alkane activation proceeds by different mechanisms under sulfate-reducing and methanogenic conditions

(2013) C.M. Aitken et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Transcriptional response of bathypelagic marine bacterioplankton to the Deepwater Horizon oil spill

(2013) Adam R Rivers et al.   ISME Journal

Trehalose/2-sulfotrehalose biosynthesis and glycine-betaine uptake are widely spread mechanisms for osmoadaptation in the Halobacteriales

(2013) Noha H Youssef et al.   ISME Journal

Bacterial growth at −15 °C; molecular insights from the permafrost bacterium Planococcus halocryophilus Or1

(2013) Nadia C S Mykytczuk et al.   ISME Journal

Characterization of a Novel Rieske-Type Alkane Monooxygenase System in Pusillimonas sp. Strain T7-7

(2013) P. Li et al.   JOURNAL OF BACTERIOLOGY

The Genome of the Moderate Halophile Amycolicicoccus subflavus DQS3-9A1T Reveals Four Alkane Hydroxylation Systems and Provides Some Clues on the Genetic Basis for Its Adaptation to a Petroleum Environment

(2013) Yong Nie et al.   PLoS One

DNA-SIP Reveals That Syntrophaceae Play an Important Role in Methanogenic Hexadecane Degradation

(2013) Lei Cheng et al.   PLoS One

Identity and mechanisms of alkane-oxidizing metalloenzymes from deep-sea hydrothermal vents

(2013) Erin M. Bertrand et al.   Frontiers in Microbiology

Microbial Communities Involved in Methane Production from Hydrocarbons in Oil Sands Tailings

(2012) Tariq Siddique et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Enhanced haloarchaeal oil removal in hypersaline environments via organic nitrogen fertilization and illumination

(2012) D. M. Al-Mailem et al.   EXTREMOPHILES

Diversity of flavin-binding monooxygenase genes (almA) in marine bacteria capable of degradation long-chain alkanes

(2012) Wanpeng Wang et al.   FEMS MICROBIOLOGY ECOLOGY

Metagenomic Analysis of the Bioremediation of Diesel-Contaminated Canadian High Arctic Soils

(2012) Etienne Yergeau et al.   PLoS One

Structural differences between thermophilic and mesophilic membrane proteins

(2012) Alejandro D. Meruelo et al.   PROTEIN SCIENCE

Degradation of petroleum hydrocarbons (C6–C40) and crude oil by a novel Dietzia strain

(2011) Xing-Biao Wang et al.   BIORESOURCE TECHNOLOGY

Thermotolerance and molecular chaperone function of the small heat shock protein HSP20 from hyperthermophilic archaeon, Sulfolobus solfataricus P2

(2011) Dong-Chol Li et al.   CELL STRESS & CHAPERONES

Methanogenic toluene metabolism: community structure and intermediates

(2011) S. Jane Fowler et al.   ENVIRONMENTAL MICROBIOLOGY

Multiple alkane hydroxylase systems in a marine alkane degrader, Alcanivorax dieselolei B-5

(2011) Chenli Liu et al.   ENVIRONMENTAL MICROBIOLOGY

The quantitative significance of Syntrophaceae and syntrophic partnerships in methanogenic degradation of crude oil alkanes

(2011) N. D. Gray et al.   ENVIRONMENTAL MICROBIOLOGY

Bio-protective effects of homologous disaccharides on biological macromolecules

(2011) S. Magazù et al.   EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS

Enrichment and proteome analysis of a hyperthermostable protein set of archaeon Thermococcus onnurineus NA1

(2011) Sung-Ho Yun et al.   EXTREMOPHILES

Growth ofPseudomonas putidaat low temperature: global transcriptomic and proteomic analyses

(2011) Pilar Fonseca et al.   Environmental Microbiology Reports

Cold adaptation in the marine bacterium, Sphingopyxis alaskensis, assessed using quantitative proteomics

(2010) Lily Ting et al.   ENVIRONMENTAL MICROBIOLOGY

Gene diversity of CYP153A and AlkB alkane hydroxylases in oil-degrading bacteria isolated from the Atlantic Ocean

(2010) Liping Wang et al.   ENVIRONMENTAL MICROBIOLOGY

Diversity and Abundance of Oil-Degrading Bacteria and Alkane Hydroxylase (alkB) Genes in the Subtropical Seawater of Xiamen Island

(2010) Wanpeng Wang et al.   MICROBIAL ECOLOGY

Stress responses of thermophilic Geobacillus sp. NTU 03 caused by heat and heat-induced stress

(2010) Tsung-Wei Shih et al.   MICROBIOLOGICAL RESEARCH

Osmotically induced synthesis of the dipeptide N-acetylglutaminylglutamine amide is mediated by a new pathway conserved among bacteria

(2010) Brice Sagot et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Thermophilic Adaptation of Protein Complexes Inferred from Proteomic Homology Modeling

(2010) Bin-Guang Ma et al.   STRUCTURE

Role ofvapBCtoxin–antitoxin loci in the thermal stress response ofSulfolobus solfataricus

(2009) Charlotte R. Cooper et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

Alkane inducible proteins in Geobacillus thermoleovorans B23

(2009) Tomohisa Kato et al.   BMC MICROBIOLOGY

Newalkgenes detected in Antarctic marine sediments

(2009) Emanuele Kuhn et al.   ENVIRONMENTAL MICROBIOLOGY

Degradation of alkanes by bacteria

(2009) Fernando Rojo   ENVIRONMENTAL MICROBIOLOGY

Selection of a cold-adapted bacterium for bioremediation of wastewater at low temperatures

(2009) Emmanuelle Gratia et al.   EXTREMOPHILES

Identification of different alkane hydroxylase systems inRhodococcus ruberstrain SP2B, an hexane-degrading actinomycete

(2009) A. Amouric et al.   JOURNAL OF APPLIED MICROBIOLOGY

The Electron Transfer System of Syntrophically Grown Desulfovibrio vulgaris

(2009) C. B. Walker et al.   JOURNAL OF BACTERIOLOGY

Psychrobacter arcticus 273-4 Uses Resource Efficiency and Molecular Motion Adaptations for Subzero Temperature Growth

(2009) P. W. Bergholz et al.   JOURNAL OF BACTERIOLOGY

Thermus thermophilusProteins That Are Differentially Expressed in Response to Growth Temperature and Their Implication in Thermoadaptation

(2009) Hebin Li et al.   JOURNAL OF PROTEOME RESEARCH

Substrate-dependent transcriptomic shifts inPelotomaculum thermopropionicumgrown in syntrophic co-culture withMethanothermobacter thermautotrophicus

(2009) Souichiro Kato et al.   Microbial Biotechnology

Architecture of thermal adaptation in an Exiguobacterium sibiricum strain isolated from 3 million year old permafrost: A genome and transcriptome approach

(2008) Debora F Rodrigues et al.   BMC GENOMICS

Crystal Structure of Long-Chain Alkane Monooxygenase (LadA) in Complex with Coenzyme FMN: Unveiling the Long-Chain Alkane Hydroxylase

(2007) Liu Li et al.   JOURNAL OF MOLECULAR BIOLOGY