Comparative analysis of metagenomes from three methanogenic hydrocarbon-degrading enrichment cultures with 41 environmental samples
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Title
Comparative analysis of metagenomes from three methanogenic hydrocarbon-degrading enrichment cultures with 41 environmental samples
Authors
Keywords
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Journal
ISME Journal
Volume 9, Issue 9, Pages 2028-2045
Publisher
Springer Nature
Online
2015-03-03
DOI
10.1038/ismej.2015.22
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Note: Only part of the references are listed.- Metatranscriptome of an Anaerobic Benzene-Degrading, Nitrate-Reducing Enrichment Culture Reveals Involvement of Carboxylation in Benzene Ring Activation
- (2014) Fei Luo et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Identification of toluene degraders in a methanogenic enrichment culture
- (2014) S. Jane Fowler et al. FEMS MICROBIOLOGY ECOLOGY
- Anaerobic oxidation of long-chain n-alkanes by the hyperthermophilic sulfate-reducing archaeon, Archaeoglobus fulgidus
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- (2014) Boonfei Tan et al. ISME Journal
- Anaerobic hydrocarbon and fatty acid metabolism by syntrophic bacteria and their impact on carbon steel corrosion
- (2014) Christopher N. Lyles et al. Frontiers in Microbiology
- Diversity of Benzylsuccinate Synthase-Like (bssA) Genes in Hydrocarbon-Polluted Marine Sediments Suggests Substrate-Dependent Clustering
- (2013) Alejandro Acosta-González et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Syntrophic biodegradation of hydrocarbon contaminants
- (2013) Lisa M Gieg et al. CURRENT OPINION IN BIOTECHNOLOGY
- Microbial community and potential functional gene diversity involved in anaerobic hydrocarbon degradation and methanogenesis in an oil sands tailings pond
- (2013) Dongshan An et al. GENOME
- Metagenomic analysis of an anaerobic alkane-degrading microbial culture: potential hydrocarbon-activating pathways and inferred roles of community members
- (2013) Boonfei Tan et al. GENOME
- Evidence that crude oil alkane activation proceeds by different mechanisms under sulfate-reducing and methanogenic conditions
- (2013) C.M. Aitken et al. GEOCHIMICA ET COSMOCHIMICA ACTA
- Single-cell genome and metatranscriptome sequencing reveal metabolic interactions of an alkane-degrading methanogenic community
- (2013) Mallory Embree et al. ISME Journal
- Phoenix 2: A locally installable large-scale 16S rRNA gene sequence analysis pipeline with Web interface
- (2013) Jung Soh et al. JOURNAL OF BIOTECHNOLOGY
- DNA-SIP Reveals That Syntrophaceae Play an Important Role in Methanogenic Hexadecane Degradation
- (2013) Lei Cheng et al. PLoS One
- In situ detection of anaerobic alkane metabolites in subsurface environments
- (2013) Akhil Agrawal et al. Frontiers in Microbiology
- Enzymes involved in the anaerobic oxidation of n-alkanes: from methane to long-chain paraffins
- (2013) Amy V. Callaghan Frontiers in Microbiology
- Microbial diversity and methanogenic activity of Antrim Shale formation waters from recently fractured wells
- (2013) Cornelia Wuchter et al. Frontiers in Microbiology
- Metagenomic analysis and metabolite profiling of deep–sea sediments from the Gulf of Mexico following the Deepwater Horizon oil spill
- (2013) Nikole E. Kimes et al. Frontiers in Microbiology
- Enhanced Gene Detection Assays for Fumarate-Adding Enzymes Allow Uncovering of Anaerobic Hydrocarbon Degraders in Terrestrial and Marine Systems
- (2012) Frederick von Netzer et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Key players and team play: anaerobic microbial communities in hydrocarbon-contaminated aquifers
- (2012) Sabine Kleinsteuber et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Comparative metagenomics of three Dehalococcoides-containing enrichment cultures: the role of the non-dechlorinating community
- (2012) Laura A Hug et al. BMC GENOMICS
- Methanogenic biodegradation of two-ringed polycyclic aromatic hydrocarbons
- (2012) Carolina Berdugo-Clavijo et al. FEMS MICROBIOLOGY ECOLOGY
- Functional responses of methanogenic archaea to syntrophic growth
- (2012) Christopher B Walker et al. ISME Journal
- Stereochemical Investigations Reveal the Mechanism of the Bacterial Activation of n-Alkanes without Oxygen
- (2011) René Jarling et al. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
- Biogeochemistry of Microbial Coal-Bed Methane
- (2011) Dariusz Strąpoć et al. Annual Review of Earth and Planetary Sciences
- Diversity of Five Anaerobic Toluene-Degrading Microbial Communities Investigated Using Stable Isotope Probing
- (2011) Weimin Sun et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Identification of new enzymes potentially involved in anaerobic naphthalene degradation by the sulfate-reducing enrichment culture N47
- (2011) Franz D. Bergmann et al. ARCHIVES OF MICROBIOLOGY
- Methanogenic toluene metabolism: community structure and intermediates
- (2011) S. Jane Fowler et al. ENVIRONMENTAL MICROBIOLOGY
- The genome sequence of Desulfatibacillum alkenivorans AK-01: a blueprint for anaerobic alkane oxidation
- (2011) A. V. Callaghan et al. ENVIRONMENTAL MICROBIOLOGY
- Co-metabolic conversion of toluene in anaerobic n-alkane-degrading bacteria
- (2011) Ralf Rabus et al. ENVIRONMENTAL MICROBIOLOGY
- The quantitative significance of Syntrophaceae and syntrophic partnerships in methanogenic degradation of crude oil alkanes
- (2011) N. D. Gray et al. ENVIRONMENTAL MICROBIOLOGY
- Field and laboratory studies on the bioconversion of coal to methane in the San Juan Basin
- (2011) Boris Wawrik et al. FEMS MICROBIOLOGY ECOLOGY
- Genomic Insights into Syntrophy: The Paradigm for Anaerobic Metabolic Cooperation
- (2010) Jessica R. Sieber et al. Annual Review of Microbiology
- Identifying biologically relevant differences between metagenomic communities
- (2010) Donovan H. Parks et al. BIOINFORMATICS
- Carbon and Sulfur Cycling by Microbial Communities in a Gypsum-Treated Oil Sands Tailings Pond
- (2010) Esther Ramos-Padrón et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- Microbial communities involved in anaerobic degradation of alkanes
- (2010) Serge Maurice Mbadinga et al. INTERNATIONAL BIODETERIORATION & BIODEGRADATION
- Experimental factors affecting PCR-based estimates of microbial species richness and evenness
- (2010) Anna Engelbrektson et al. ISME Journal
- Multiple syntrophic interactions in a terephthalate-degrading methanogenic consortium
- (2010) Athanasios Lykidis et al. ISME Journal
- DNA-SIP identifies sulfate-reducing Clostridia as important toluene degraders in tar-oil-contaminated aquifer sediment
- (2010) Christian Winderl et al. ISME Journal
- SOrt-ITEMS: Sequence orthology based approach for improved taxonomic estimation of metagenomic sequences
- (2009) M. Monzoorul Haque et al. BIOINFORMATICS
- Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates
- (2009) Victor Kunin et al. ENVIRONMENTAL MICROBIOLOGY
- Anaerobic benzene degradation by Gram-positive sulfate-reducing bacteria
- (2009) Nidal Abu Laban et al. FEMS MICROBIOLOGY ECOLOGY
- Crude Oil at the Bemidji Site: 25 Years of Monitoring, Modeling, and Understanding
- (2009) Hedeff I. Essaid et al. Groundwater
- The Electron Transfer System of Syntrophically Grown Desulfovibrio vulgaris
- (2009) C. B. Walker et al. JOURNAL OF BACTERIOLOGY
- Combined Genomic and Proteomic Approaches Identify Gene Clusters Involved in Anaerobic 2-Methylnaphthalene Degradation in the Sulfate-Reducing Enrichment Culture N47
- (2009) D. Selesi et al. JOURNAL OF BACTERIOLOGY
- Identification of putative benzene-degrading bacteria in methanogenic enrichment cultures
- (2009) Nahoko Sakai et al. JOURNAL OF BIOSCIENCE AND BIOENGINEERING
- Anaerobic Biodegradation of Aromatic Hydrocarbons: Pathways and Prospects
- (2009) Julia Foght JOURNAL OF MOLECULAR MICROBIOLOGY AND BIOTECHNOLOGY
- Anaerobic Catabolism of Aromatic Compounds: a Genetic and Genomic View
- (2009) M. Carmona et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
- The Pfam protein families database
- (2009) Robert D. Finn et al. NUCLEIC ACIDS RESEARCH
- Substrate-dependent transcriptomic shifts inPelotomaculum thermopropionicumgrown in syntrophic co-culture withMethanothermobacter thermautotrophicus
- (2009) Souichiro Kato et al. Microbial Biotechnology
- The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes
- (2008) F Meyer et al. BMC BIOINFORMATICS
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