PCLPred: A Bioinformatics Method for Predicting Protein–Protein Interactions by Combining Relevance Vector Machine Model with Low-Rank Matrix Approximation

Fast prediction of protein methylation sites using a sequence-based feature selection technique

(2017) Leyi Wei et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

Local-DPP: An improved DNA-binding protein prediction method by exploring local evolutionary information

(2017) Leyi Wei et al.   INFORMATION SCIENCES

PCVMZM: Using the Probabilistic Classification Vector Machines Model Combined with a Zernike Moments Descriptor to Predict Protein–Protein Interactions from Protein Sequences

(2017) Yanbin Wang et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Predicting protein–protein interactions from protein sequences by a stacked sparse autoencoder deep neural network

(2017) Yan-Bin Wang et al.   Molecular BioSystems

Detection of Interactions between Proteins by Using Legendre Moments Descriptor to Extract Discriminatory Information Embedded in PSSM

(2017) Yan-Bin Wang et al.   MOLECULES

Accurate prediction of protein-protein interactions by integrating potential evolutionary information embedded in PSSM profile and discriminative vector machine classifier

(2017) Zheng-Wei Li et al.   Oncotarget

Highly Efficient Framework for Predicting Interactions Between Proteins

(2017) Zhu-Hong You et al.   IEEE Transactions on Cybernetics

Pretata: predicting TATA binding proteins with novel features and dimensionality reduction strategy

(2016) Quan Zou et al.   BMC Systems Biology

Editorial (Thematic Issue: Machine Learning Techniques for Protein Structure, Genomics Function Analysis and Disease Prediction)

(2016) Quan Zou   Current Proteomics

Protein Folds Prediction with Hierarchical Structured SVM

(2016) Dapeng Li et al.   Current Proteomics

A novel features ranking metric with application to scalable visual and bioinformatics data classification

(2016) Quan Zou et al.   NEUROCOMPUTING

HAlign: Fast multiple similar DNA/RNA sequence alignment based on the centre star strategy

(2015) Quan Zou et al.   BIOINFORMATICS

Prediction of Protein–Protein Interactions with Clustered Amino Acids and Weighted Sparse Representation

(2015) Qiaoying Huang et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Improving network topology-based protein interactome mapping via collaborative filtering

(2015) Xin Luo et al.   KNOWLEDGE-BASED SYSTEMS

Using Weighted Sparse Representation Model Combined with Discrete Cosine Transformation to Predict Protein-Protein Interactions from Protein Sequence

(2015) Yu-An Huang et al.   Biomed Research International

Predicting Protein-Protein Interactions from Primary Protein Sequences Using a Novel Multi-Scale Local Feature Representation Scheme and the Random Forest

(2015) Zhu-Hong You et al.   PLoS One

Using distances between Top-n-gram and residue pairs for protein remote homology detection

(2014) Bin Liu et al.   BMC BIOINFORMATICS

Prediction of protein-protein interactions from amino acid sequences with ensemble extreme learning machines and principal component analysis

(2013) Zhu-Hong You et al.   BMC BIOINFORMATICS

Protein Remote Homology Detection by Combining Chou’s Pseudo Amino Acid Composition and Profile-Based Protein Representation

(2013) Bin Liu et al.   Molecular Informatics

Increasing the reliability of protein–protein interaction networks via non-convex semantic embedding

(2013) Lin Zhu et al.   NEUROCOMPUTING

t-LSE: A Novel Robust Geometric Approach for Modeling Protein-Protein Interaction Networks

(2013) Lin Zhu et al.   PLoS One

Assessing and predicting protein interactions by combining manifold embedding with multiple information integration

(2012) Ying-Ke Lei et al.   BMC BIOINFORMATICS

Structure-based prediction of protein–protein interactions on a genome-wide scale

(2012) Qiangfeng Cliff Zhang et al.   NATURE

LIBSVM

(2012) Chih-Chung Chang et al.   ACM Transactions on Intelligent Systems and Technology

Prediction of protein–protein interaction sites using patch-based residue characterization

(2011) Zhijun Qiu et al.   JOURNAL OF THEORETICAL BIOLOGY

Using manifold embedding for assessing and predicting protein interactions from high-throughput experimental data

(2010) Z.-H. You et al.   BIOINFORMATICS

Prediction of Protein-Protein Interactions from Protein Sequence Using Local Descriptors

(2010) Lei Yang et al.   PROTEIN AND PEPTIDE LETTERS

Structured low-rank approximation and its applications

(2008) Ivan Markovsky   AUTOMATICA

Fault diagnosis of low speed bearing based on relevance vector machine and support vector machine

(2008) Achmad Widodo et al.   EXPERT SYSTEMS WITH APPLICATIONS

Using support vector machine combined with auto covariance to predict protein–protein interactions from protein sequences

(2008) Yanzhi Guo et al.   NUCLEIC ACIDS RESEARCH