Pretata: predicting TATA binding proteins with novel features and dimensionality reduction strategy

A novel features ranking metric with application to scalable visual and bioinformatics data classification

(2016) Quan Zou et al.   NEUROCOMPUTING

Recombination spot identification Based on gapped k-mers

(2016) Rong Wang et al.   Scientific Reports

iMiRNA-SSF: Improving the Identification of MicroRNA Precursors by Combining Negative Sets with Different Distributions

(2016) Junjie Chen et al.   Scientific Reports

Improving compound–protein interaction prediction by building up highly credible negative samples

(2015) Hui Liu et al.   BIOINFORMATICS

Application of learning to rank to protein remote homology detection

(2015) Bin Liu et al.   BIOINFORMATICS

protr/ProtrWeb: R package and web server for generating various numerical representation schemes of protein sequences

(2015) Nan Xiao et al.   BIOINFORMATICS

Identifying DNA-binding proteins by combining support vector machine and PSSM distance transformation

(2015) Ruifeng Xu et al.   BMC Systems Biology

Integrative approaches for predicting microRNA function and prioritizing disease-related microRNA using biological interaction networks

(2015) Xiangxiang Zeng et al.   BRIEFINGS IN BIOINFORMATICS

Exploratory Predicting Protein Folding Model with Random Forest and Hybrid Features

(2015) Xuewei Zhao et al.   Current Proteomics

imDC: an ensemble learning method for imbalanced classification with miRNA data

(2015) C.Y. Wang et al.   GENETICS AND MOLECULAR RESEARCH

Enhanced Protein Fold Prediction Method Through a Novel Feature Extraction Technique

(2015) Leyi Wei et al.   IEEE TRANSACTIONS ON NANOBIOSCIENCE

An Improved Protein Structural Classes Prediction Method by Incorporating Both Sequence and Structure Information

(2015) Leyi Wei et al.   IEEE TRANSACTIONS ON NANOBIOSCIENCE

Identification of microRNA precursor with the degenerate K-tuple or Kmer strategy

(2015) Bin Liu et al.   JOURNAL OF THEORETICAL BIOLOGY

Improving tRNAscan-SE Annotation Results via Ensemble Classifiers

(2015) Quan Zou et al.   Molecular Informatics

Pse-in-One: a web server for generating various modes of pseudo components of DNA, RNA, and protein sequences

(2015) Bin Liu et al.   NUCLEIC ACIDS RESEARCH

nDNA-prot: identification of DNA-binding proteins based on unbalanced classification

(2014) Li Song et al.   BMC BIOINFORMATICS

Computational power of tissue P systems for generating control languages

(2014) Xingyi Zhang et al.   INFORMATION SCIENCES

Adaptive Linear and Normalized Combination of Radial Basis Function Networks for Function Approximation and Regression

(2014) Yunfeng Wu et al.   MATHEMATICAL PROBLEMS IN ENGINEERING

Representation of fluctuation features in pathological knee joint vibroarthrographic signals using kernel density modeling method

(2014) Shanshan Yang et al.   MEDICAL ENGINEERING & PHYSICS

Spiking Neural P Systems with Thresholds

(2014) Xiangxiang Zeng et al.   NEURAL COMPUTATION

Effective Dysphonia Detection Using Feature Dimension Reduction and Kernel Density Estimation for Patients with Parkinson’s Disease

(2014) Shanshan Yang et al.   PLoS One

iDNA-Prot|dis: Identifying DNA-Binding Proteins by Incorporating Amino Acid Distance-Pairs and Reduced Alphabet Profile into the General Pseudo Amino Acid Composition

(2014) Bin Liu et al.   PLoS One

Combining evolutionary information extracted from frequency profiles with sequence-based kernels for protein remote homology detection

(2013) Bin Liu et al.   BIOINFORMATICS

Identification of properties important to protein aggregation using feature selection

(2013) Yaping Fang et al.   BMC BIOINFORMATICS

BinMemPredict: a Web Server and Software for Predicting Membrane Protein Types

(2013) Quan Zou et al.   Current Proteomics

Classification of Knee Joint Vibration Signals Using Bivariate Feature Distribution Estimation and Maximal Posterior Probability Decision Criterion

(2013) Yunfeng Wu et al.   Entropy

Improved and Promising Identification of Human MicroRNAs by Incorporating a High-Quality Negative Set

(2013) Leyi Wei et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

PseAAC-Builder: A cross-platform stand-alone program for generating various special Chou’s pseudo-amino acid compositions

(2012) Pufeng Du et al.   ANALYTICAL BIOCHEMISTRY

A Global Characterization and Identification of Multifunctional Enzymes

(2012) Xian-Ying Cheng et al.   PLoS One

Combining least-squares support vector machines for classification of biomedical signals: a case study with knee-joint vibroarthrographic signals

(2011) Yunfeng Wu et al.   JOURNAL OF EXPERIMENTAL & THEORETICAL ARTIFICIAL INTELLIGENCE

A GEE approach for estimating size of hard-to-reach population by using capture–recapture data

(2011) Shenghai Zhang   STATISTICS

CD-HIT Suite: a web server for clustering and comparing biological sequences

(2010) Ying Huang et al.   BIOINFORMATICS

A new taxonomy-based protein fold recognition approach based on autocross-covariance transformation

(2009) Qiwen Dong et al.   BIOINFORMATICS

PseAAC: A flexible web server for generating various kinds of protein pseudo amino acid composition

(2007) Hong-Bin Shen et al.   ANALYTICAL BIOCHEMISTRY