t-LSE: A Novel Robust Geometric Approach for Modeling Protein-Protein Interaction Networks

Interactome Networks and Human Disease

(2011) Marc Vidal et al.   CELL

Global Geometric Affinity for Revealing High Fidelity Protein Interaction Network

(2011) Yi Fang et al.   PLoS One

How threshold behaviour affects the use of subgraphs for network comparison

(2010) Tiago Rito et al.   BIOINFORMATICS

Using manifold embedding for assessing and predicting protein interactions from high-throughput experimental data

(2010) Z.-H. You et al.   BIOINFORMATICS

Random classification noise defeats all convex potential boosters

(2009) Philip M. Long et al.   MACHINE LEARNING

Optimized Null Model for Protein Structure Networks

(2009) Tijana Milenković et al.   PLoS One

Geometric De-noising of Protein-Protein Interaction Networks

(2009) Oleksii Kuchaiev et al.   PLoS Computational Biology

Fitting a geometric graph to a protein–protein interaction network

(2008) Desmond J. Higham et al.   BIOINFORMATICS

GraphCrunch: A tool for large network analyses

(2008) Tijana Milenković et al.   BMC BIOINFORMATICS

Increasing the reliability of protein interactomes

(2008) Hon Nian Chua et al.   DRUG DISCOVERY TODAY