Association of improved oxidative stress tolerance and alleviation of glucose repression with superior xylose-utilization capability by a natural isolate of Saccharomyces cerevisiae

Molecular mechanisms of the yeast adaptive response and tolerance to stresses encountered during ethanol fermentation

(2017) Choowong Auesukaree   JOURNAL OF BIOSCIENCE AND BIOENGINEERING

Production of fuels and chemicals from xylose by engineered Saccharomyces cerevisiae: a review and perspective

(2017) Suryang Kwak et al.   Microbial Cell Factories

Comparative transcriptomes reveal novel evolutionary strategies adopted by Saccharomyces cerevisiae with improved xylose utilization capability

(2016) Wei-Yi Zeng et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Roles of Catalase and Trehalose in the Protection from Hydrogen Peroxide Toxicity in Saccharomyces cerevisiae

(2016) TAKUTO NISHIMOTO et al.   BIOCONTROL SCIENCE

Towards efficient bioethanol production from agricultural and forestry residues: Exploration of unique natural microorganisms in combination with advanced strain engineering

(2016) Xinqing Zhao et al.   BIORESOURCE TECHNOLOGY

Transcriptional profiling reveals molecular basis and novel genetic targets for improved resistance to multiple fermentation inhibitors in Saccharomyces cerevisiae

(2016) Yingying Chen et al.   Biotechnology for Biofuels

Reprogramming of nonfermentative metabolism by stress-responsive transcription factors in the yeast Saccharomyces cerevisiae

(2016) Nitnipa Soontorngun   CURRENT GENETICS

Hexokinase 2 Is an Intracellular Glucose Sensor of Yeast Cells That Maintains the Structure and Activity of Mig1 Protein Repressor Complex

(2016) Montserrat Vega et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Mutation of a regulator Ask10p improves xylose isomerase activity through up-regulation of molecular chaperones in Saccharomyces cerevisiae

(2016) Jin Hou et al.   METABOLIC ENGINEERING

PHO13 deletion-induced transcriptional activation prevents sedoheptulose accumulation during xylose metabolism in engineered Saccharomyces cerevisiae

(2016) Haiqing Xu et al.   METABOLIC ENGINEERING

Model-based transcriptome engineering promotes a fermentative transcriptional state in yeast

(2016) Drew G. Michael et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Directed Evolution Reveals Unexpected Epistatic Interactions That Alter Metabolic Regulation and Enable Anaerobic Xylose Use by Saccharomyces cerevisiae

(2016) Trey K. Sato et al.   PLoS Genetics

Disruption of PHO13 improves ethanol production via the xylose isomerase pathway

(2016) Takahiro Bamba et al.   AMB Express

Evolved hexose transporter enhances xylose uptake and glucose/xylose co-utilization in Saccharomyces cerevisiae

(2016) Amanda Reider Apel et al.   Scientific Reports

Unraveling the genetic basis of xylose consumption in engineered Saccharomyces cerevisiae strains

(2016) Leandro Vieira dos Santos et al.   Scientific Reports

Xylose-induced dynamic effects on metabolism and gene expression in engineered Saccharomyces cerevisiae in anaerobic glucose-xylose cultures

(2015) Susanne Alff-Tuomala et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

A dynamic flux balance model and bottleneck identification of glucose, xylose, xylulose co-fermentation in Saccharomyces cerevisiae

(2015) William Hohenschuh et al.   BIORESOURCE TECHNOLOGY

Identification of novel metabolic interactions controlling carbon flux from xylose to ethanol in natural and recombinant yeasts

(2015) Gert Trausinger et al.   Biotechnology for Biofuels

Identification of furfural resistant strains of Saccharomyces cerevisiae and Saccharomyces paradoxus from a collection of environmental and industrial isolates

(2015) Sarah J Field et al.   Biotechnology for Biofuels

Improved growth and ethanol fermentation ofSaccharomyces cerevisiaein the presence of acetic acid by overexpression ofSET5andPPR1

(2015) Ming-Ming Zhang et al.   Biotechnology Journal

Xylose fermentation by Saccharomyces cerevisiae using endogenous xylose-assimilating genes

(2015) Jin Konishi et al.   BIOTECHNOLOGY LETTERS

ChiNet uncovers rewired transcription subnetworks in tolerant yeast for advanced biofuels conversion

(2015) Yang Zhang et al.   NUCLEIC ACIDS RESEARCH

Improved growth and ethanol fermentation ofSaccharomyces cerevisiaein the presence of acetic acid by overexpression ofSET5andPPR1

(2015) Ming-Ming Zhang et al.   Biotechnology Journal

The novel zinc cluster regulator Tog1 plays important roles in oleate utilization and oxidative stress response in Saccharomyces cerevisiae

(2014) Piyasuda Thepnok et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Transcription analysis of recombinant industrial and laboratory Saccharomyces cerevisiae strains reveals the molecular basis for fermentation of glucose and xylose

(2014) Akinori Matsushika et al.   Microbial Cell Factories

Altered sterol composition renders yeast thermotolerant

(2014) L. Caspeta et al.   SCIENCE

Deletion ofFPS1, Encoding Aquaglyceroporin Fps1p, Improves Xylose Fermentation by Engineered Saccharomyces cerevisiae

(2013) Na Wei et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Comparative functional genomics to reveal the molecular basis of phenotypic diversities and guide the genetic breeding of industrial yeast strains

(2013) Dao-Qiong Zheng et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Strain engineering of Saccharomyces cerevisiae for enhanced xylose metabolism

(2013) Soo Rin Kim et al.   BIOTECHNOLOGY ADVANCES

Impact of osmotic stress and ethanol inhibition in yeast cells on process oscillation associated with continuous very-high-gravity ethanol fermentation

(2013) Liang Wang et al.   Biotechnology for Biofuels

Investigating host dependence of xylose utilization in recombinant Saccharomyces cerevisiae strains using RNA-seq analysis

(2013) Xueyang Feng et al.   Biotechnology for Biofuels

Enhanced expression of genes involved in initial xylose metabolism and the oxidative pentose phosphate pathway in the improved xylose-utilizing Saccharomyces cerevisiae through evolutionary engineering

(2013) Jian Zha et al.   JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY

Rational and Evolutionary Engineering Approaches Uncover a Small Set of Genetic Changes Efficient for Rapid Xylose Fermentation in Saccharomyces cerevisiae

(2013) Soo Rin Kim et al.   PLoS One

An efficient xylose-fermenting recombinant Saccharomyces cerevisiae strain obtained through adaptive evolution and its global transcription profile

(2012) Yu Shen et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Implementation of a transhydrogenase-like shunt to counter redox imbalance during xylose fermentation in Saccharomyces cerevisiae

(2012) Hiroyuki Suga et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Role of Unsaturated Lipid and Ergosterol in Ethanol Tolerance of Model Yeast Biomembranes

(2012) Juan M. Vanegas et al.   BIOPHYSICAL JOURNAL

Characterization of non-oxidative transaldolase and transketolase enzymes in the pentose phosphate pathway with regard to xylose utilization by recombinant Saccharomyces cerevisiae

(2012) Akinori Matsushika et al.   ENZYME AND MICROBIAL TECHNOLOGY

Xylose isomerase overexpression along with engineering of the pentose phosphate pathway and evolutionary engineering enable rapid xylose utilization and ethanol production by Saccharomyces cerevisiae

(2012) Hang Zhou et al.   METABOLIC ENGINEERING

Simultaneous co-fermentation of mixed sugars: a promising strategy for producing cellulosic ethanol

(2012) Soo Rin Kim et al.   TRENDS IN BIOTECHNOLOGY

Regulation of Phospholipid Synthesis in the YeastSaccharomyces cerevisiae

(2011) George M. Carman et al.   Annual Review of Biochemistry

Reduction of PDC1 expression in S. cerevisiae with xylose isomerase on xylose medium

(2011) Dong Min Kim et al.   BIOPROCESS AND BIOSYSTEMS ENGINEERING

Fructose and glucose differentially affect aging and carbonyl/oxidative stress parameters in Saccharomyces cerevisiae cells

(2011) Halyna M. Semchyshyn et al.   CARBOHYDRATE RESEARCH

The Stress Response Factors Yap6, Cin5, Phd1, and Skn7 Direct Targeting of the Conserved Co-Repressor Tup1-Ssn6 in S. cerevisiae

(2011) Sean E. Hanlon et al.   PLoS One

Saccharomyces cerevisiae engineered for xylose metabolism requires gluconeogenesis and the oxidative branch of the pentose phosphate pathway for aerobic xylose assimilation

(2011) Ronald E. Hector et al.   YEAST

Adaptation of Hansenula polymorpha to methanol: a transcriptome analysis

(2010) Tim van Zutphen et al.   BMC GENOMICS

Oleic acid and ergosterol supplementation mitigates oxidative stress in wine strains of Saccharomyces cerevisiae

(2010) Sara Landolfo et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Engineering industrial Saccharomyces cerevisiae strains for xylose fermentation and comparison for switchgrass conversion

(2010) Ronald E. Hector et al.   JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY

Genome-wide identification of Saccharomyces cerevisiae genes required for tolerance to acetic acid

(2010) Nuno P Mira et al.   Microbial Cell Factories

Hsp12 Is an Intrinsically Unstructured Stress Protein that Folds upon Membrane Association and Modulates Membrane Function

(2010) Sylvia Welker et al.   MOLECULAR CELL

Bulk Segregant Analysis by High-Throughput Sequencing Reveals a Novel Xylose Utilization Gene from Saccharomyces cerevisiae

(2010) Jared W. Wenger et al.   PLoS Genetics

Catalase Overexpression Reduces Lactic Acid-Induced Oxidative Stress in Saccharomyces cerevisiae

(2009) D. A. Abbott et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Bioethanol production performance of five recombinant strains of laboratory and industrial xylose-fermenting Saccharomyces cerevisiae

(2009) Akinori Matsushika et al.   BIORESOURCE TECHNOLOGY

Transcriptional regulation of nonfermentable carbon utilization in budding yeast

(2009) Bernard Turcotte et al.   FEMS YEAST RESEARCH

Redox control and oxidative stress in yeast cells

(2008) Enrique Herrero et al.   BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS

Predicting functional transcription factor binding through alignment-free and affinity-based analysis of orthologous promoter sequences

(2008) Lucas D. Ward et al.   BIOINFORMATICS

Membrane lipids: where they are and how they behave

(2008) Gerrit van Meer et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY