Evolutionary engineering of industrial microorganisms-strategies and applications
Published 2018 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Evolutionary engineering of industrial microorganisms-strategies and applications
Authors
Keywords
Evolutionary engineering, Industrial microorganisms, Evolutionary strategies, Systems biology, Inverse metabolic engineering
Journal
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
Volume 102, Issue 11, Pages 4615-4627
Publisher
Springer Nature
Online
2018-04-05
DOI
10.1007/s00253-018-8937-1
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Increased production of L-serine in Escherichia coli through Adaptive Laboratory Evolution
- (2017) Hemanshu Mundhada et al. METABOLIC ENGINEERING
- Evolutionary engineering reveals divergent paths when yeast is adapted to different acidic environments
- (2017) Eugene Fletcher et al. METABOLIC ENGINEERING
- Automated multiplex genome-scale engineering in yeast
- (2017) Tong Si et al. Nature Communications
- Fully Automated One-Step Synthesis of Single-Transcript TALEN Pairs Using a Biological Foundry
- (2017) Ran Chao et al. ACS Synthetic Biology
- Engineering Robustness of Microbial Cell Factories
- (2017) Zhiwei Gong et al. Biotechnology Journal
- Improvement of d -Lactic Acid Production in Saccharomyces cerevisiae Under Acidic Conditions by Evolutionary and Rational Metabolic Engineering
- (2017) Seung-Ho Baek et al. Biotechnology Journal
- Improving isopropanol tolerance and production of Clostridium beijerinckii DSM 6423 by random mutagenesis and genome shuffling
- (2016) H. Máté de Gérando et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- High-throughput screening methods for nitrilases
- (2016) Ya-Ping Xue et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Adaptive evolution of Schizochytrium sp. by continuous high oxygen stimulations to enhance docosahexaenoic acid synthesis
- (2016) Xiao-Man Sun et al. BIORESOURCE TECHNOLOGY
- A new laboratory evolution approach to select for constitutive acetic acid tolerance in Saccharomyces cerevisiae and identification of causal mutations
- (2016) Daniel González-Ramos et al. Biotechnology for Biofuels
- Long-term adaptive evolution of Leuconostoc mesenteroides for enhancement of lactic acid tolerance and production
- (2016) Si Yeon Ju et al. Biotechnology for Biofuels
- Tailoring of global transcription sigma D factor by random mutagenesis to improve Escherichia coli tolerance towards low-pHs
- (2016) Xi Gao et al. JOURNAL OF BIOTECHNOLOGY
- Enhanced Acid Tolerance in Bifidobacterium longum by Adaptive Evolution: Comparison of the Genes between the Acid-Resistant Variant and Wild-Type Strain
- (2016) Yunyun Jiang et al. JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY
- CRISPR/Cas9 advances engineering of microbial cell factories
- (2016) Tadas Jakočiūnas et al. METABOLIC ENGINEERING
- Synthetic Evolution of Metabolic Productivity Using Biosensors
- (2016) Thomas C. Williams et al. TRENDS IN BIOTECHNOLOGY
- Adaptive engineering of a hyperthermophilic archaeon on CO and discovering the underlying mechanism by multi-omics analysis
- (2016) Seong Hyuk Lee et al. Scientific Reports
- Multigene Editing in the Escherichia coli Genome via the CRISPR-Cas9 System
- (2015) Yu Jiang et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Acid-Adapted Strains of Escherichia coli K-12 Obtained by Experimental Evolution
- (2015) Mark M. Harden et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Thermal and Solvent Stress Cross-Tolerance Conferred to Corynebacterium glutamicum by Adaptive Laboratory Evolution
- (2015) Shinichi Oide et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Quantitative evaluation of DNA damage and mutation rate by atmospheric and room-temperature plasma (ARTP) and conventional mutagenesis
- (2015) Xue Zhang et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- An efficient high-throughput screening assay for rapid directed evolution of halohydrin dehalogenase for preparation of β-substituted alcohols
- (2015) Nan-Wei Wan et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Combinatorial and high-throughput screening approaches for strain engineering
- (2015) Wenshan Liu et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Transcription factor-based biosensors in biotechnology: current state and future prospects
- (2015) Regina Mahr et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Design and parallelisation of a miniature photobioreactor platform for microalgal culture evaluation and optimisation
- (2015) Ebenezer O. Ojo et al. BIOCHEMICAL ENGINEERING JOURNAL
- Metabolic engineering of acid resistance elements to improve acid resistance and propionic acid production ofPropionibacterium jensenii
- (2015) Ningzi Guan et al. BIOTECHNOLOGY AND BIOENGINEERING
- Genome shuffling of Lactobacillus brevis for enhanced production of thymidine phosphorylase
- (2015) Hongmei Li et al. BIOTECHNOLOGY AND BIOPROCESS ENGINEERING
- Coupled ARTP and ALE strategy to improve anaerobic cell growth and succinic acid production byEscherichia coli
- (2015) Jiang-feng Ma et al. JOURNAL OF CHEMICAL TECHNOLOGY AND BIOTECHNOLOGY
- Efficient succinic acid production by engineered Escherichia coli using ammonia as neutralizer
- (2015) Ming-ke Wu et al. JOURNAL OF CHEMICAL TECHNOLOGY AND BIOTECHNOLOGY
- A qualitative and quantitative high-throughput assay for screening of gluconate high-yield strains by Aspergillus niger
- (2015) Fei Shi et al. JOURNAL OF MICROBIOLOGICAL METHODS
- Metabolic engineering of Escherichia coli using CRISPR–Cas9 meditated genome editing
- (2015) Yifan Li et al. METABOLIC ENGINEERING
- Biosensor-driven adaptive laboratory evolution of l -valine production in Corynebacterium glutamicum
- (2015) Regina Mahr et al. METABOLIC ENGINEERING
- Evolution for exogenous octanoic acid tolerance improves carboxylic acid production and membrane integrity
- (2015) Liam A. Royce et al. METABOLIC ENGINEERING
- Comparative genome analysis of a thermotolerant Escherichia coli obtained by Genome Replication Engineering Assisted Continuous Evolution (GREACE) and its parent strain provides new understanding of microbial heat tolerance
- (2015) Guodong Luan et al. New Biotechnology
- Tolerance engineering in bacteria for the production of advanced biofuels and chemicals
- (2015) Aindrila Mukhopadhyay TRENDS IN MICROBIOLOGY
- Use of ddPCR in experimental evolution studies
- (2015) Hanna Koch et al. Methods in Ecology and Evolution
- Adaptation of Lactococcus lactis to high growth temperature leads to a dramatic increase in acidification rate
- (2015) Jun Chen et al. Scientific Reports
- Atmospheric and room temperature plasma (ARTP) as a new powerful mutagenesis tool
- (2014) Xue Zhang et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Evolutionary engineering by genome shuffling
- (2014) Damien Biot-Pelletier et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- The functional basis of adaptive evolution in chemostats
- (2014) David Gresham et al. FEMS MICROBIOLOGY REVIEWS
- The enduring utility of continuous culturing in experimental evolution
- (2014) David Gresham et al. GENOMICS
- Recent advances in the evolutionary engineering of industrial biocatalysts
- (2014) James D. Winkler et al. GENOMICS
- Rewiring global regulator cAMP receptor protein (CRP) to improve E. coli tolerance towards low pH
- (2014) Souvik Basak et al. JOURNAL OF BIOTECHNOLOGY
- The development and application of high throughput cultivation technology in bioprocess development
- (2014) Quan Long et al. JOURNAL OF BIOTECHNOLOGY
- Physiological and proteomic analysis of Lactobacillus casei in response to acid adaptation
- (2014) Chongde Wu et al. JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY
- The effects of RecO deficiency inLactococcus lactisNZ9000 on resistance to multiple environmental stresses
- (2014) Mengru Zhang et al. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE
- Evolution reveals a glutathione-dependent mechanism of 3-hydroxypropionic acid tolerance
- (2014) Kanchana R. Kildegaard et al. METABOLIC ENGINEERING
- Comparative metabolomics analysis of the key metabolic nodes in propionic acid synthesis in Propionibacterium acidipropionici
- (2014) Ningzi Guan et al. Metabolomics
- Evolution-guided optimization of biosynthetic pathways
- (2014) Srivatsan Raman et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Understanding of how Propionibacterium acidipropionici respond to propionic acid stress at the level of proteomics
- (2014) Ningzi Guan et al. Scientific Reports
- Tools for developing tolerance to toxic chemicals in microbial systems and perspectives on moving the field forward and into the industrial setting
- (2014) George L Peabody et al. Current Opinion in Chemical Engineering
- Genome Shuffling of Aspergillus niger for Improving Transglycosylation Activity
- (2013) Wei Li et al. APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY
- Enhancement of lipid production in low-starch mutants Chlamydomonas reinhardtii by adaptive laboratory evolution
- (2013) Shuiyan Yu et al. BIORESOURCE TECHNOLOGY
- Heterologous expression of Lactobacillus casei RecO improved the multiple-stress tolerance and lactic acid production in Lactococcus lactis NZ9000 during salt stress
- (2013) Chongde Wu et al. BIORESOURCE TECHNOLOGY
- Evolutionary engineering ofSaccharomyces cerevisiaefor enhanced tolerance to hydrolysates of lignocellulosic biomass
- (2013) María P. Almario et al. BIOTECHNOLOGY AND BIOENGINEERING
- Adaptive evolution of Corynebacterium glutamicum resistant to oxidative stress and its global gene expression profiling
- (2013) Joo-Young Lee et al. BIOTECHNOLOGY LETTERS
- Acquisition of thermotolerant yeastSaccharomyces cerevisiaeby breeding via stepwise adaptation
- (2013) Atsushi Satomura et al. BIOTECHNOLOGY PROGRESS
- Metabolic evolution of Corynebacterium glutamicum for increased production of L-ornithine
- (2013) Ling-Yan Jiang et al. BMC BIOTECHNOLOGY
- Repurposing CRISPR as an RNA-Guided Platform for Sequence-Specific Control of Gene Expression
- (2013) Lei S. Qi et al. CELL
- Novel mutant strains ofRhodosporidium toruloidesby plasma mutagenesis approach and their tolerance for inhibitors in lignocellulosic hydrolyzate
- (2013) Feng Qi et al. JOURNAL OF CHEMICAL TECHNOLOGY AND BIOTECHNOLOGY
- Enhanced succinic acid production by Actinobacillus succinogenes after genome shuffling
- (2013) Pu Zheng et al. JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY
- Improving carotenoids production in yeast via adaptive laboratory evolution
- (2013) Luis H. Reyes et al. METABOLIC ENGINEERING
- Adaptive laboratory evolution – principles and applications for biotechnology
- (2013) Martin Dragosits et al. Microbial Cell Factories
- Osmotic stress adaptation in Lactobacillus casei BL23 leads to structural changes in the cell wall polymer lipoteichoic acid
- (2013) M. M. Palomino et al. MICROBIOLOGY-SGM
- Improving Ethanol Tolerance of Escherichia coli by Rewiring Its Global Regulator cAMP Receptor Protein (CRP)
- (2013) Huiqing Chong et al. PLoS One
- Rapid Mutation of Spirulina platensis by a New Mutagenesis System of Atmospheric and Room Temperature Plasmas (ARTP) and Generation of a Mutant Library with Diverse Phenotypes
- (2013) Mingyue Fang et al. PLoS One
- Programming adaptive control to evolve increased metabolite production
- (2013) Howard H. Chou et al. Nature Communications
- Selection of a Bifidobacterium animalis subsp.lactisStrain with a Decreased Ability To Produce Acetic Acid
- (2012) Abelardo Margolles et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Production of pyruvate in Saccharomyces cerevisiae through adaptive evolution and rational cofactor metabolic engineering
- (2012) Zhikun Wang et al. BIOCHEMICAL ENGINEERING JOURNAL
- Enhanced acid tolerance in Lactobacillus casei by adaptive evolution and compared stress response during acid stress
- (2012) Juan Zhang et al. BIOTECHNOLOGY AND BIOPROCESS ENGINEERING
- Long-Term Diversity and Genome Adaptation of Acinetobacter baylyi in a Minimal-Medium Chemostat
- (2012) Nadia Jezequel et al. Genome Biology and Evolution
- Engineering and adaptive evolution of Escherichia coli for d-lactate fermentation reveals GatC as a xylose transporter
- (2012) José Utrilla et al. METABOLIC ENGINEERING
- Xylose isomerase overexpression along with engineering of the pentose phosphate pathway and evolutionary engineering enable rapid xylose utilization and ethanol production by Saccharomyces cerevisiae
- (2012) Hang Zhou et al. METABOLIC ENGINEERING
- Visualizing evolution in real time to determine the molecular mechanisms of n-butanol tolerance in Escherichia coli
- (2012) Luis H. Reyes et al. METABOLIC ENGINEERING
- Systems metabolic engineering, industrial biotechnology and microbial cell factories
- (2012) Sang-Yup Lee et al. Microbial Cell Factories
- Yeast Adapts to a Changing Stressful Environment by Evolving Cross-Protection and Anticipatory Gene Regulation
- (2012) Riddhiman Dhar et al. MOLECULAR BIOLOGY AND EVOLUTION
- Evolutionary rescue and adaptation to abrupt environmental change depends upon the history of stress
- (2012) A. Gonzalez et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Adaptive Evolution of the Lactose Utilization Network in Experimentally Evolved Populations of Escherichia coli
- (2012) Selwyn Quan et al. PLoS Genetics
- Evaluation of a Droplet Digital Polymerase Chain Reaction Format for DNA Copy Number Quantification
- (2011) Leonardo B. Pinheiro et al. ANALYTICAL CHEMISTRY
- Genome shuffling of Trichoderma viride for enhanced cellulase production
- (2011) Feng Xu et al. ANNALS OF MICROBIOLOGY
- Experimental Evolution of a Facultative Thermophile from a Mesophilic Ancestor
- (2011) Ian K. Blaby et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- A combined physiological and proteomic approach to reveal lactic-acid-induced alterations in Lactobacillus casei Zhang and its mutant with enhanced lactic acid tolerance
- (2011) Chongde Wu et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Improving ethanol fermentation performance of Saccharomyces cerevisiae in very high-gravity fermentation through chemical mutagenesis and meiotic recombination
- (2011) Jing-Jing Liu et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Random mutagenesis of global transcription factor cAMP receptor protein for improved osmotolerance
- (2011) Hongfang Zhang et al. BIOTECHNOLOGY AND BIOENGINEERING
- Adaptive laboratory evolution—harnessing the power of biology for metabolic engineering
- (2011) Vasiliy A Portnoy et al. CURRENT OPINION IN BIOTECHNOLOGY
- Batch and continuous culture-based selection strategies for acetic acid tolerance in xylose-fermenting Saccharomyces cerevisiae
- (2011) Jeremiah Wright et al. FEMS YEAST RESEARCH
- Adaptation of Saccharomyces cerevisiae to saline stress through laboratory evolution
- (2011) R. DHAR et al. JOURNAL OF EVOLUTIONARY BIOLOGY
- Method for Designing and Optimizing Random-Search Libraries for Strain Improvement
- (2010) D. Klein-Marcuschamer et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- A salt tolerant Enterobacter cloacae mutant for bioaugmentation of petroleum- and salt-contaminated soil
- (2010) Xiufu Hua et al. BIOCHEMICAL ENGINEERING JOURNAL
- Improved xylose and arabinose utilization by an industrial recombinant Saccharomyces cerevisiae strain using evolutionary engineering
- (2010) Rosa Garcia Sanchez et al. Biotechnology for Biofuels
- Systems biology of microbial metabolism
- (2010) Matthias Heinemann et al. CURRENT OPINION IN MICROBIOLOGY
- Evolution ofEscherichia colifor Growth at High Temperatures
- (2010) Birgit Rudolph et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Adaptive evolution of nontransgenic Escherichia coli KC01 for improved ethanol tolerance and homoethanol fermentation from xylose
- (2010) Yongze Wang et al. JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY
- Ultrahigh-throughput screening in drop-based microfluidics for directed evolution
- (2010) J. J. Agresti et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Genome shuffling of Hansenula anomala to improve flavour formation of soy sauce
- (2010) Xiaohong Cao et al. WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY
- Improved Production of Ethanol by Novel Genome Shuffling in Saccharomyces cerevisiae
- (2009) Lihua Hou APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY
- Directed evolution of enzymes: Library screening strategies
- (2009) Hans Leemhuis et al. IUBMB LIFE
- Novel mutation breeding method forStreptomyces avermitilisusing an atmospheric pressure glow discharge plasma
- (2009) L.-Y. Wang et al. JOURNAL OF APPLIED MICROBIOLOGY
- Genome shuffling ofZygosaccharomyces rouxiito accelerate and enhance the flavour formation of soy sauce
- (2009) Xiaohong Cao et al. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE
- Micro-bioreactors for fed-batch fermentations with integrated online monitoring and microfluidic devices
- (2008) A. Buchenauer et al. BIOSENSORS & BIOELECTRONICS
- A high-throughput screen for hyaluronic acid accumulation in recombinant Escherichia coli transformed by libraries of engineered sigma factors
- (2008) Huimin Yu et al. BIOTECHNOLOGY AND BIOENGINEERING
- Genome shuffling to improve thermotolerance, ethanol tolerance and ethanol productivity of Saccharomyces cerevisiae
- (2008) Dong-jian Shi et al. JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY
- Molecular characterization of clonal interference during adaptive evolution in asexual populations of Saccharomyces cerevisiae
- (2008) Katy C Kao et al. NATURE GENETICS
- Reconstruction of biochemical networks in microorganisms
- (2008) Adam M. Feist et al. NATURE REVIEWS MICROBIOLOGY
- Application of systems biology for bioprocess development
- (2008) Jin Hwan Park et al. TRENDS IN BIOTECHNOLOGY
Find the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
SearchBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started