Characterizing Antarctic fish assemblages using eDNA obtained from marine sponge bycatch specimens

Aquatic environmental DNA: A review of the macro-organismal biomonitoring revolution

(2023) Miwa Takahashi et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Airborne environmental DNA for terrestrial vertebrate community monitoring

(2022) Christina Lynggaard et al.   CURRENT BIOLOGY

Combined Use of eDNA Metabarcoding and Bottom Trawling for the Assessment of Fish Biodiversity in the Zhoushan Sea

(2022) Shan Zhou et al.   Frontiers in Marine Science

Little samplers, big fleet: eDNA metabarcoding from commercial trawlers enhances ocean monitoring

(2022) Giulia Maiello et al.   FISHERIES RESEARCH

What are the real environmental impacts of Antarctic tourism? Unveiling their importance through a comprehensive meta-analysis

(2022) P. Tejedo et al.   JOURNAL OF ENVIRONMENTAL MANAGEMENT

Environmental DNA persistence and fish detection in captive sponges

(2022) Wang Cai et al.   Molecular Ecology Resources

Forecasting the future of life in Antarctica

(2022) Gabrielle Koerich et al.   TRENDS IN ECOLOGY & EVOLUTION

Comparison of species-specific qPCR and metabarcoding methods to detect small pelagic fish distribution from open ocean environmental DNA

(2022) Zeshu Yu et al.   PLoS One

crabs —A software program to generate curated reference databases for metabarcoding sequencing data

(2022) Gert‐Jan Jeunen et al.   Molecular Ecology Resources

Developing an effective marine eDNA monitoring: eDNA detection at pre-outbreak densities of corallivorous seastar (Acanthaster cf. solaris)

(2022) Sven Uthicke et al.   SCIENCE OF THE TOTAL ENVIRONMENT

First complete description of the dark-mouth skate Raja arctowskii Dollo, 1904 from Antarctic waters, assigned to the genus Bathyraja (Elasmobranchii, Rajiformes, Arhynchobatidae)

(2021) Matthias F. W. Stehmann et al.   Marine Biodiversity

Passive eDNA collection enhances aquatic biodiversity analysis

(2021) Bessey Cindy et al.   Communications Biology

Meta‐analysis shows that environmental DNA outperforms traditional surveys, but warrants better reporting standards

(2021) Julija Fediajevaite et al.   Ecology and Evolution

Towards the Optimization of eDNA/eRNA Sampling Technologies for Marine Biosecurity Surveillance

(2021) Holly A. Bowers et al.   Water

Fieldable Environmental DNA Sequencing to Assess Jellyfish Biodiversity in Nearshore Waters of the Florida Keys, United States

(2021) Cheryl Lewis Ames et al.   Frontiers in Marine Science

Environmental DNA provides higher resolution assessment of riverine biodiversity and ecosystem function via spatio-temporal nestedness and turnover partitioning

(2021) Mathew Seymour et al.   Communications Biology

Environmental DNA survey captures patterns of fish and invertebrate diversity across a tropical seascape

(2020) Bryan N. Nguyen et al.   Scientific Reports

Detecting and correcting misclassified sequences in the large-scale public databases

(2020) Hamid Bagheri et al.   BIOINFORMATICS

Remote, autonomous real-time monitoring of environmental DNA from commercial fish

(2020) Brian K. Hansen et al.   Scientific Reports

A comprehensive and comparative evaluation of primers for metabarcoding eDNA from fish

(2020) Shan Zhang et al.   Methods in Ecology and Evolution

Significant taxon sampling gaps in DNA databases limit the operational use of marine macrofauna metabarcoding

(2020) Jon Thomassen Hestetun et al.   Marine Biodiversity

More Than Expected From Old Sponge Samples: A Natural Sampler DNA Metabarcoding Assessment of Marine Fish Diversity in Nha Trang Bay (Vietnam)

(2020) Marta Turon et al.   Frontiers in Marine Science

Species-level biodiversity assessment using marine environmental DNA metabarcoding requires protocol optimization and standardization

(2019) Gert-Jan Jeunen et al.   Ecology and Evolution

Marine environmental DNA biomonitoring reveals seasonal patterns in biodiversity and identifies ecosystem responses to anomalous climatic events

(2019) Tina E. Berry et al.   PLoS Genetics

Sponges as natural environmental DNA samplers

(2019) Stefano Mariani et al.   CURRENT BIOLOGY

DNA barcode reference libraries for the monitoring of aquatic biota in Europe: Gap-analysis and recommendations for future work

(2019) Hannah Weigand et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Release and degradation of environmental DNA and RNA in a marine system

(2019) Susanna A. Wood et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Understanding PCR Processes to Draw Meaningful Conclusions from Environmental DNA Studies

(2019) Ryan P. Kelly et al.   Scientific Reports

Investigating three sources of bias in hook-and-line surveys: survey design, gear saturation and multispecies interactions

(2018) Peter T. Kuriyama et al.   CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES

Combined use of eDNA metabarcoding and video surveillance for the assessment of fish biodiversity

(2018) Michal Stat et al.   CONSERVATION BIOLOGY

Environmental DNA (eDNA) metabarcoding reveals strong discrimination among diverse marine habitats connected by water movement

(2018) Gert-Jan Jeunen et al.   Molecular Ecology Resources

Environmental DNA metabarcoding studies are critically affected by substrate selection

(2018) Adam Koziol et al.   Molecular Ecology Resources

On the way for detecting and quantifying elusive species in the sea: The Octopus vulgaris case study

(2017) Q. Mauvisseau et al.   FISHERIES RESEARCH

DNA metabarcoding for diet analysis and biodiversity: A case study using the endangered Australian sea lion (Neophoca cinerea )

(2017) Tina E. Berry et al.   Ecology and Evolution

Spatial distribution of environmental DNA in a nearshore marine habitat

(2017) James L. O’Donnell et al.   PeerJ

Quantification of Environmental DNA (eDNA) Shedding and Decay Rates for Three Marine Fish

(2016) Lauren M. Sassoubre et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Environmental DNA detects Critically Endangered largetooth sawfish in the wild

(2016) CA Simpfendorfer et al.   Endangered Species Research

Environmental DNA from Seawater Samples Correlate with Trawl Catches of Subarctic, Deepwater Fishes

(2016) Philip Francis Thomsen et al.   PLoS One

Environmental DNA – An emerging tool in conservation for monitoring past and present biodiversity

(2015) Philip Francis Thomsen et al.   BIOLOGICAL CONSERVATION

Global conservation status of sponges

(2015) James J. Bell et al.   CONSERVATION BIOLOGY

Tag jumps illuminated - reducing sequence-to-sample misidentifications in metabarcoding studies

(2015) Ida Baerholm Schnell et al.   Molecular Ecology Resources

DNA barcoding and metabarcoding of standardized samples reveal patterns of marine benthic diversity

(2015) Matthieu Leray et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

From Benchtop to Desktop: Important Considerations when Designing Amplicon Sequencing Workflows

(2015) Dáithí C. Murray et al.   PLoS One

Diet of Antarctic toothfish (Dissostichus mawsoni) from the continental slope and oceanic features of the Ross Sea region, Antarctica

(2014) Darren W. Stevens et al.   ANTARCTIC SCIENCE

The Oceanography and Ecology of the Ross Sea

(2013) Walker O. Smith et al.   Annual Review of Marine Science

Fishing down the food web of the Antarctic continental shelf and slope

(2013) David G. Ainley et al.   POLAR RECORD

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

Anthropogenic impacts on marine ecosystems in Antarctica

(2011) Richard B. Aronson et al.   Annals of the New York Academy of Sciences

Coexistence of mesopredators in an intact polar ocean ecosystem: The basis for defining a Ross Sea marine protected area

(2011) Grant Ballard et al.   BIOLOGICAL CONSERVATION

Climate change and the Antarctic marine ecosystem: an essay on management implications

(2010) P.N. Trathan et al.   ANTARCTIC SCIENCE

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Antarctic Marine Biodiversity – What Do We Know About the Distribution of Life in the Southern Ocean?

(2010) Huw J. Griffiths   PLoS One

Vulnerability of national economies to the impacts of climate change on fisheries

(2009) Edward H. Allison et al.   FISH AND FISHERIES

Detection criteria for managing trawl impacts on vulnerable marine ecosystems in high seas fisheries of the South Pacific Ocean

(2009) SJ Parker et al.   MARINE ECOLOGY PROGRESS SERIES

Species detection using environmental DNA from water samples

(2008) G. F. Ficetola et al.   Biology Letters

Molecular analysis of Southern Ocean skates (Bathyraja) reveals a new species of Antarctic skate

(2008) P. J. Smith et al.   JOURNAL OF FISH BIOLOGY