Molecular signature of neutrophil extracellular trap mediating disease module in idiopathic inflammatory myopathy

Association between type I interferon pathway activation and clinical outcomes in rheumatic and musculoskeletal diseases: a systematic literature review informing EULAR points to consider

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Targeting Neutrophils for Promoting the Resolution of Inflammation

(2022) János G. Filep   Frontiers in Immunology

Revealing key regulators of neutrophil function during inflammation by re-analysing single-cell RNA-seq

(2022) Zhichao Ai   PLoS One

A network of core and subtype-specific gene expression programs in myositis

(2021) David R. Amici et al.   ACTA NEUROPATHOLOGICA

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(2021) Tariq E. Khoyratty et al.   NATURE IMMUNOLOGY

Expression characteristics of interferon-stimulated genes and possible regulatory mechanisms in lupus patients using transcriptomics analyses

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Receptor-Mediated NETosis on Neutrophils

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Complement C5a induces the formation of neutrophil extracellular traps by myeloid-derived suppressor cells to promote metastasis

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Transcriptional regulation of neutrophil differentiation and function during inflammation

(2020) Zhichao Ai et al.   JOURNAL OF LEUKOCYTE BIOLOGY

A genome-wide transcriptomic analysis of protein-coding genes in human blood cells

(2020) Mathias Uhlen et al.   SCIENCE

Machine learning algorithms reveal unique gene expression profiles in muscle biopsies from patients with different types of myositis

(2020) Iago Pinal-Fernandez et al.   ANNALS OF THE RHEUMATIC DISEASES

Nonimmune mechanisms in idiopathic inflammatory myopathies

(2020) Marta Loredo Martinez et al.   CURRENT OPINION IN RHEUMATOLOGY

Myositis autoantigen expression correlates with muscle regeneration but not autoantibody specificity

(2019) Iago Pinal-Fernandez et al.   Arthritis & Rheumatology

Network-based prediction of drug combinations

(2019) Feixiong Cheng et al.   Nature Communications

ZEBs: Novel Players in Immune Cell Development and Function

(2019) Charlotte L. Scott et al.   TRENDS IN IMMUNOLOGY

Identification of distinctive interferon gene signatures in different types of myositis

(2019) Iago Pinal-Fernandez et al.   NEUROLOGY

Integrated transcriptomics reveals master regulators of lung adenocarcinoma and novel repositioning of drug candidates

(2019) Marco Antônio De Bastiani et al.   Cancer Medicine

DAMPs and NETs in Sepsis

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The Human Transcription Factors

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Risk factors and disease mechanisms in myositis

(2018) Frederick W. Miller et al.   Nature Reviews Rheumatology

Autoantibodies in myositis

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Treatment in myositis

(2018) Chester V. Oddis et al.   Nature Reviews Rheumatology

Classification of myositis

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Baseline peripheral blood neutrophil-to-lymphocyte ratio could predict survival in patients with adult polymyositis and dermatomyositis: A retrospective observational study

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A randomized, double-blind, placebo-controlled trial of infliximab in refractory polymyositis and dermatomyositis

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Myositis in a Patient with Advanced Lung Cancer Treated with Osimertinib

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Classification and management of adult inflammatory myopathies

(2018) Albert Selva-O'Callaghan et al.   LANCET NEUROLOGY

An integrative approach for building personalized gene regulatory networks for precision medicine

(2018) Monique G. P. van der Wijst et al.   Genome Medicine

IVIG-mediated effector functions in autoimmune and inflammatory diseases

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Activated protein C inhibits neutrophil extracellular trap formationin vitroand activationin vivo

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DrugBank 5.0: a major update to the DrugBank database for 2018

(2017) David S Wishart et al.   NUCLEIC ACIDS RESEARCH

ImpulseDE: detection of differentially expressed genes in time series data using impulse models

(2016) Jil Sander et al.   BIOINFORMATICS

IRF8 Transcription Factor Controls Survival and Function of Terminally Differentiated Conventional and Plasmacytoid Dendritic Cells, Respectively

(2016) Dorine Sichien et al.   IMMUNITY

Resolution of inflammation: a new therapeutic frontier

(2016) James N. Fullerton et al.   NATURE REVIEWS DRUG DISCOVERY

Network biology concepts in complex disease comorbidities

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Enrichr: a comprehensive gene set enrichment analysis web server 2016 update

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KEGG: new perspectives on genomes, pathways, diseases and drugs

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Inhibitors of Serine Proteases in Regulating the Production and Function of Neutrophil Extracellular Traps

(2016) Pawel Majewski et al.   Frontiers in Immunology

Removing Batch Effects from Longitudinal Gene Expression - Quantile Normalization Plus ComBat as Best Approach for Microarray Transcriptome Data

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P-selectin promotes neutrophil extracellular trap formation in mice

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Regulators of genetic risk of breast cancer identified by integrative network analysis

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limma powers differential expression analyses for RNA-sequencing and microarray studies

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The Reactome pathway Knowledgebase

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Uncovering disease-disease relationships through the incomplete interactome

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Tissue-based map of the human proteome

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Immobilized Immune Complexes Induce Neutrophil Extracellular Trap Release by Human Neutrophil Granulocytes via FcγRIIIB and Mac-1

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Dendritic cell fate is determined by BCL11A

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Genomic Profiling Reveals That Transient Adipogenic Activation Is a Hallmark of Mouse Models of Skeletal Muscle Regeneration

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Master regulators of FGFR2 signalling and breast cancer risk

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Idiopathic inflammatory myopathies: pathogenic mechanisms of muscle weakness

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Phosphatase Wip1 negatively regulates neutrophil development through p38 MAPK-STAT1

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Endocytosis of soluble immune complexes leads to their clearance by Fc RIIIB but induces neutrophil extracellular traps via Fc RIIA in vivo

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Annexin A1 modulates natural and glucocorticoid-induced resolution of inflammation by enhancing neutrophil apoptosis

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A randomized, pilot trial of etanercept in dermatomyositis

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REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms

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Netting Neutrophils Are Major Inducers of Type I IFN Production in Pediatric Systemic Lupus Erythematosus

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Network medicine: a network-based approach to human disease

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Systematic RNA interference reveals that oncogenic KRAS-driven cancers require TBK1

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