Sensory Perception in Bacterial Cyclic Diguanylate Signal Transduction

Pseudomonas aeruginosa as a Model To Study Chemosensory Pathway Signaling

(2021) Miguel A. Matilla et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Structural and Functional Investigation of the Periplasmic Arsenate-Binding Protein ArrX from Chrysiogenes arsenatis

(2021) Nilakhi Poddar et al.   BIOCHEMISTRY

Enzymatic activity of the blue light‐regulated phosphodiesterase BlrP1 from Klebsiella pneumoniae shows a nonlinear dependence on light intensity

(2021) Kosei Shibata et al.   FEBS LETTERS

High-Specificity Local and Global c-di-GMP Signaling

(2021) Regine Hengge   TRENDS IN MICROBIOLOGY

Flagellar Perturbations Activate Adhesion through Two Distinct Pathways in Caulobacter crescentus

(2021) David M. Hershey et al.   mBio

Mechanosensitive remodeling of the bacterial flagellar motor is independent of direction of rotation

(2021) Navish Wadhwa et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bacterial cyclic diguanylate signaling networks sense temperature

(2021) Henrik Almblad et al.   Nature Communications

Host-emitted amino acid cues regulate bacterial chemokinesis to enhance colonization

(2021) Catherine D. Robinson et al.   Cell Host & Microbe

Integrated control of surface adaptation by the bacterial flagellum

(2021) David M Hershey   CURRENT OPINION IN MICROBIOLOGY

Diversity of bacterial chemosensory systems

(2021) Vadim M Gumerov et al.   CURRENT OPINION IN MICROBIOLOGY

Interaction between the type 4 pili machinery and a diguanylate cyclase fine-tune c-di-GMP levels during early biofilm formation

(2021) Shanice S. Webster et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Bacterial Inflammation Sensor Regulates c-di-GMP Signaling, Adhesion, and Biofilm Formation

(2021) Arden Perkins et al.   mBio

Rampant prophage movement among transient competitors drives rapid adaptation during infection

(2021) Christopher W. Marshall et al.   Science Advances

Azorhizobium caulinodans c-di-GMP phosphodiesterase Chp1 involved in motility, EPS production, and nodulation of the host plant

(2020) Yu Sun et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Identification and Characterization of a Redox Sensor Phosphodiesterase from Ferrovum sp. PN-J185 Containing Bacterial Hemerythrin and HD-GYP Domains

(2020) Kenichi Kitanishi et al.   BIOCHEMISTRY

An assessment of genome annotation coverage across the bacterial tree of life

(2020) Briallen Lobb et al.   Microbial Genomics

Light-mediated decreases in cyclic di-GMP levels inhibit structure formation in Pseudomonas aeruginosa biofilms

(2020) Lisa Juliane Kahl et al.   JOURNAL OF BACTERIOLOGY

Reciprocal c-di-GMP signaling: Incomplete flagellum biogenesis triggers c-di-GMP signaling pathways that promote biofilm formation

(2020) Daniel C. Wu et al.   PLoS Genetics

The Structural Basis of the Binding of Various Aminopolycarboxylates by the Periplasmic EDTA-Binding Protein EppA from Chelativorans sp. BNC1

(2020) Kevin M. Lewis et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Elevated exopolysaccharide levels in Pseudomonas aeruginosa flagellar mutants have implications for biofilm growth and chronic infections

(2020) Joe J. Harrison et al.   PLoS Genetics

Thermoregulation of Biofilm Formation in Pseudomonas aeruginosa

(2020) Suran Kim et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Heme inhibits the activity of a c-di-GMP phosphodiesterase in Vibrio cholerae

(2020) Ilana Heckler et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Increased c-di-GMP levels lead to the production of alginates of high molecular mass in Azotobacter vinelandii

(2020) Carlos L. Ahumada-Manuel et al.   JOURNAL OF BACTERIOLOGY

More than a feeling: microscopy approaches to understanding surface-sensing mechanisms

(2020) Katherine J. Graham et al.   JOURNAL OF BACTERIOLOGY

SMART: recent updates, new developments and status in 2020

(2020) Ivica Letunic et al.   NUCLEIC ACIDS RESEARCH

Sensing of autoinducer-2 by functionally distinct receptors in prokaryotes

(2020) Lei Zhang et al.   Nature Communications

A Bacteriophytochrome Mediates Interplay between Light Sensing and the Second Messenger Cyclic Di-GMP to Control Social Behavior and Virulence

(2020) Raj Kumar Verma et al.   Cell Reports

Fur Represses Vibrio cholerae Biofilm Formation via Direct Regulation of vieSAB, cdgD, vpsU, and vpsA-K Transcription

(2020) He Gao et al.   Frontiers in Microbiology

Flagellar stators stimulate c-di-GMP production by Pseudomonas aeruginosa

(2019) Amy E. Baker et al.   JOURNAL OF BACTERIOLOGY

Structural basis of DSF recognition by its receptor RpfR and its regulatory interaction with the DSF synthase RpfF

(2019) Evan J. Waldron et al.   PLOS BIOLOGY

Time-Resolved Study of Interprotein Signaling Process of a Blue Light Sensor PapB-PapA Complex

(2019) Yusuke Nakasone et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Influence of the N-terminal segment and the PHY-tongue element on light-regulation in bacteriophytochromes

(2019) Geoffrey Gourinchas et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Torque-dependent remodeling of the bacterial flagellar motor

(2019) Navish Wadhwa et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Nucleotide signaling pathway convergence in a cAMP‐sensing bacterial c‐di‐GMP phosphodiesterase

(2019) Ian T Cadby et al.   EMBO JOURNAL

A Two-Component System that Modulates Cyclic-di-GMP Metabolism Promotes Legionella pneumophila Differentiation and Viability in Low-Nutrient Conditions

(2019) Elisa D. Hughes et al.   JOURNAL OF BACTERIOLOGY

Heterogeneity in surface sensing suggests a division of labor in Pseudomonas aeruginosa populations

(2019) Catherine R Armbruster et al.   eLife

The Response of Cupriavidus metallidurans CH34 to Cadmium Involves Inhibition of the Initiation of Biofilm Formation, Decrease in Intracellular c-di-GMP Levels, and a Novel Metal Regulated Phosphodiesterase

(2019) Pablo Alviz-Gazitua et al.   Frontiers in Microbiology

The Bacillus cereus Group: Bacillus Species with Pathogenic Potential

(2019) Monika Ehling-Schulz et al.   Microbiology Spectrum

Multiple Roles of c-di-GMP Signaling in Bacterial Pathogenesis

(2019) Martina Valentini et al.   Annual Review of Microbiology

Structural and functional characterization of the globin-coupled sensors of Azotobacter vinelandii and Bordetella pertussis

(2019) Francesca Germani et al.   ANTIOXIDANTS & REDOX SIGNALING

Cyanobacteriochromes: photoreceptors covering the entire UV-to-visible spectrum

(2019) Keiji Fushimi et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

NosP Modulates Cyclic-di-GMP Signaling in Legionella pneumophila

(2019) Jonathan T. Fischer et al.   BIOCHEMISTRY

A Skeptic's Guide to Bacterial Mechanosensing

(2019) Ravi Chawla et al.   JOURNAL OF MOLECULAR BIOLOGY

MiST 3.0: an updated microbial signal transduction database with an emphasis on chemosensory systems

(2019) Vadim M Gumerov et al.   NUCLEIC ACIDS RESEARCH

Sugar-mediated regulation of a c-di-GMP phosphodiesterase in Vibrio cholerae

(2019) Kyoo Heo et al.   Nature Communications

Red, Orange, Green: Light- and Temperature-Dependent Color Tuning in a Cyanobacteriochrome

(2019) David Buhrke et al.   BIOCHEMISTRY

Kinetic analysis of a globin-coupled diguanylate cyclase, YddV: Effects of heme iron redox state, axial ligands, and heme distal mutations on catalysis

(2019) Alzbeta Lengalova et al.   JOURNAL OF INORGANIC BIOCHEMISTRY

The GDP-switched GAF domain of DcpA modulates the concerted synthesis/hydrolysis of c-di-GMP in Mycobacterium smegmatis

(2018) Hui-Jie Chen et al.   BIOCHEMICAL JOURNAL

Transmembrane redox control and proteolysis of PdeC, a novel type of c‐di‐GMP phosphodiesterase

(2018) Susanne Herbst et al.   EMBO JOURNAL

Structural Basis for Polyamine Binding at the dCACHE Domain of the McpU Chemoreceptor from Pseudomonas putida

(2018) José Antonio Gavira et al.   JOURNAL OF MOLECULAR BIOLOGY

Photoreaction of BlrP1: the role of a nonlinear photo-intensity sensor

(2018) Kosei Shibata et al.   PHYSICAL CHEMISTRY CHEMICAL PHYSICS

Ligand-Mediated Biofilm Formation via Enhanced Physical Interaction between a Diguanylate Cyclase and Its Receptor

(2018) David Giacalone et al.   mBio

Bioprinting Living Biofilms through Optogenetic Manipulation

(2018) Yajia Huang et al.   ACS Synthetic Biology

Asymmetric activation mechanism of a homodimeric red light-regulated photoreceptor

(2018) Geoffrey Gourinchas et al.   eLife

Disulfide bond formation in prokaryotes

(2018) Cristina Landeta et al.   Nature Microbiology

A subset of exoribonucleases serve as degradative enzymes for pGpG in c-di-GMP signaling

(2018) Mona W. Orr et al.   JOURNAL OF BACTERIOLOGY

Nitric oxide controls c-di-GMP turnover in Dinoroseobacter shibae

(2018) Patricia Bedrunka et al.   MICROBIOLOGY-SGM

A novel bacterial l -arginine sensor controlling c-di-GMP levels in Pseudomonas aeruginosa

(2018) A Paiardini et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Structural Insights into Oxygen-Dependent Signal Transduction within Globin Coupled Sensors

(2018) Shannon Rivera et al.   INORGANIC CHEMISTRY

AU-Rich Long 3′ Untranslated Region Regulates Gene Expression in Bacteria

(2018) Ju-Ping Zhao et al.   Frontiers in Microbiology

Optogenetic Module for Dichromatic Control of c-di-GMP Signaling

(2017) Min-Hyung Ryu et al.   JOURNAL OF BACTERIOLOGY

Structural and Enzymatic Characterization of a cAMP-Dependent Diguanylate Cyclase from Pathogenic Leptospira Species

(2017) Fernanda Nogales da Costa Vasconcelos et al.   JOURNAL OF MOLECULAR BIOLOGY

Involvement of many chemotaxis sensors in negative chemotaxis to ethanol in Ralstonia pseudosolanacearum Ps29

(2017) Shota Oku et al.   MICROBIOLOGY-SGM

The protein Slr1143 is an active diguanylate cyclase in Synechocystis sp. PCC 6803 and interacts with the photoreceptor Cph2

(2017) Veronika Angerer et al.   MICROBIOLOGY-SGM

Cyclic di-GMP: second messenger extraordinaire

(2017) Urs Jenal et al.   NATURE REVIEWS MICROBIOLOGY

The importance of conserved amino acids in heme-based globin-coupled diguanylate cyclases

(2017) Xuehua Wan et al.   PLoS One

Electron-shuttling antibiotics structure bacterial communities by modulating cellular levels of c-di-GMP

(2017) Chinweike Okegbe et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

MotI (DgrA) acts as a molecular clutch on the flagellar stator protein MotA inBacillus subtilis

(2017) Sundharraman Subramanian et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Burkholderia cenocepaciaintegratescis-2-dodecenoic acid and cyclic dimeric guanosine monophosphate signals to control virulence

(2017) Chunxi Yang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The bacterium has landed

(2017) Kelly T. Hughes et al.   SCIENCE

Obstruction of pilus retraction stimulates bacterial surface sensing

(2017) Courtney K. Ellison et al.   SCIENCE

Second messenger–mediated tactile response by a bacterial rotary motor

(2017) Isabelle Hug et al.   SCIENCE

Cohesive Properties of the Caulobacter crescentus Holdfast Adhesin Are Regulated by a Novel c-di-GMP Effector Protein

(2017) Kathrin S. Sprecher et al.   mBio

Optogenetics Manipulation Enables Prevention of Biofilm Formation of Engineered Pseudomonas aeruginosa on Surfaces

(2017) Lu Pu et al.   ACS Synthetic Biology

HmsC Controls Yersinia pestis Biofilm Formation in Response to Redox Environment

(2017) Gai-Xian Ren et al.   Frontiers in Cellular and Infection Microbiology

Long-range allosteric signaling in red light–regulated diguanylyl cyclases

(2017) Geoffrey Gourinchas et al.   Science Advances

Oxygen and Bis(3′,5′)-cyclic Dimeric Guanosine Monophosphate Binding Control Oligomerization State Equilibria of Diguanylate Cyclase-Containing Globin Coupled Sensors

(2016) Justin L. Burns et al.   BIOCHEMISTRY

Thermoregulation of Biofilm Formation in Burkholderia pseudomallei Is Disrupted by Mutation of a Putative Diguanylate Cyclase

(2016) Brooke A. Plumley et al.   JOURNAL OF BACTERIOLOGY

The hmsT 3′ untranslated region mediates c-di-GMP metabolism and biofilm formation in Y ersinia pestis

(2016) Hui Zhu et al.   MOLECULAR MICROBIOLOGY

Cyclic diguanylate regulation ofBacillus cereusgroup biofilm formation

(2016) Annette Fagerlund et al.   MOLECULAR MICROBIOLOGY

Structural basis for ligand recognition by a Cache chemosensory domain that mediates carboxylate sensing in Pseudomonas syringae

(2016) Jodi L. Brewster et al.   Scientific Reports

Cache Domains That are Homologous to, but Different from PAS Domains Comprise the Largest Superfamily of Extracellular Sensors in Prokaryotes

(2016) Amit A. Upadhyay et al.   PLoS Computational Biology

Deciphering Dimerization Modes of PAS Domains: Computational and Experimental Analyses of the AhR:ARNT Complex Reveal New Insights Into the Mechanisms of AhR Transformation

(2016) Dario Corrada et al.   PLoS Computational Biology

Timescales and Frequencies of Reversible and Irreversible Adhesion Events of Single Bacterial Cells

(2015) Michelle D. Hoffman et al.   ANALYTICAL CHEMISTRY

Catalytic enhancement of the heme-based oxygen-sensing phosphodiesterase EcDOS by hydrogen sulfide is caused by changes in heme coordination structure

(2015) Fang Yan et al.   BIOMETALS

Temperature affects c-di-GMP signalling and biofilm formation inVibrio cholerae

(2015) Loni Townsley et al.   ENVIRONMENTAL MICROBIOLOGY

Bacterial Signal Transduction by Cyclic Di-GMP and Other Nucleotide Second Messengers

(2015) Regine Hengge et al.   JOURNAL OF BACTERIOLOGY

The Bacterial Phosphotransferase System: New Frontiers 50 Years after Its Discovery

(2015) Milton H. Saier Jr.   JOURNAL OF MOLECULAR MICROBIOLOGY AND BIOTECHNOLOGY

Oligoribonuclease is a central feature of cyclic diguanylate signaling inPseudomonas aeruginosa

(2015) Dorit Cohen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Oligoribonuclease is the primary degradative enzyme for pGpG inPseudomonas aeruginosathat is required for cyclic-di-GMP turnover

(2015) Mona W. Orr et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Three cyanobacteriochromes work together to form a light color-sensitive input system for c-di-GMP signaling of cell aggregation

(2015) Gen Enomoto et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Type IV pili mechanochemically regulate virulence factors inPseudomonas aeruginosa

(2015) Alexandre Persat et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A direct screen for c-di-GMP modulators reveals aSalmonellaTyphimurium periplasmic ʟ-arginine–sensing pathway

(2015) Erez Mills et al.   Science Signaling

Constitutive production of c-di-GMP is associated with mutations in a variant ofPseudomonas aeruginosawith altered membrane composition

(2015) Andrea Blanka et al.   Science Signaling

A Hierarchical Cascade of Second Messengers Regulates Pseudomonas aeruginosa Surface Behaviors

(2015) Yun Luo et al.   mBio

Contribution of Physical Interactions to Signaling Specificity between a Diguanylate Cyclase and Its Effector

(2015) Kurt M. Dahlstrom et al.   mBio

C-di-GMP regulates Pseudomonas aeruginosa stress response to tellurite during both planktonic and biofilm modes of growth

(2015) Song Lin Chua et al.   Scientific Reports

A direct screen for c-di-GMP modulators reveals aSalmonellaTyphimurium periplasmic ʟ-arginine–sensing pathway

(2015) Erez Mills et al.   Science Signaling

Constitutive production of c-di-GMP is associated with mutations in a variant ofPseudomonas aeruginosawith altered membrane composition

(2015) Andrea Blanka et al.   Science Signaling

Structural analysis of an oxygen-regulated diguanylate cyclase

(2015) Miroslaw Tarnawski et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Cyanobacteriochrome SesA Is a Diguanylate Cyclase That Induces Cell Aggregation inThermosynechococcus

(2014) Gen Enomoto et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Introduction of water into the heme distal side by Leu65 mutations of an oxygen sensor, YddV, generates verdoheme and carbon monoxide, exerting the heme oxygenase reaction

(2014) Martin Stranava et al.   JOURNAL OF INORGANIC BIOCHEMISTRY

Signaling-State Formation Mechanism of a BLUF Protein PapB from the Purple BacteriumRhodopseudomonas palustrisStudied by Femtosecond Time-Resolved Absorption Spectroscopy

(2014) Tomotsumi Fujisawa et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Oligomeric state affects oxygen dissociation and diguanylate cyclase activity of globin coupled sensors

(2014) Justin L. Burns et al.   Molecular BioSystems

Peripheral thermosensation in mammals

(2014) Joris Vriens et al.   NATURE REVIEWS NEUROSCIENCE

Vibrio cholerae use pili and flagella synergistically to effect motility switching and conditional surface attachment

(2014) Andrew S. Utada et al.   Nature Communications

Near-infrared Light Responsive Synthetic c-di-GMP Module for Optogenetic Applications

(2014) Min-Hyung Ryu et al.   ACS Synthetic Biology

Candida albicans Ethanol Stimulates Pseudomonas aeruginosa WspR-Controlled Biofilm Formation as Part of a Cyclic Relationship Involving Phenazines

(2014) Annie I. Chen et al.   PLoS Pathogens

Multi-PAS domain-mediated protein oligomerization of PpsR fromRhodobacter sphaeroides

(2014) Udo Heintz et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

HmsC, a periplasmic protein, controls biofilm formation via repression of HmsD, a diguanylate cyclase inYersinia pestis

(2013) Gai-Xian Ren et al.   ENVIRONMENTAL MICROBIOLOGY

Bacterial Community Morphogenesis Is Intimately Linked to the Intracellular Redox State

(2013) L. E. P. Dietrich et al.   JOURNAL OF BACTERIOLOGY

Heme-based Globin-coupled Oxygen Sensors: Linking Oxygen Binding to Functional Regulation of Diguanylate Cyclase, Histidine Kinase, and Methyl-accepting Chemotaxis

(2013) Markéta Martínková et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Characterization of Elements Involved in Allosteric Light Regulation of Phosphodiesterase Activity by Comparison of Different Functional BlrP1 States

(2013) Andreas Winkler et al.   JOURNAL OF MOLECULAR BIOLOGY

Cyclic di-GMP: the First 25 Years of a Universal Bacterial Second Messenger

(2013) U. Romling et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Antimicrobial activity of metals: mechanisms, molecular targets and applications

(2013) Joseph A. Lemire et al.   NATURE REVIEWS MICROBIOLOGY

C-di-GMP Hydrolysis by Pseudomonas aeruginosa HD-GYP Phosphodiesterases: Analysis of the Reaction Mechanism and Novel Roles for pGpG

(2013) Valentina Stelitano et al.   PLoS One

Dynamics of mechanosensing in the bacterial flagellar motor

(2013) P. P. Lele et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cyclic diguanosine monophosphate represses bacterial flagella synthesis by interacting with the Walker A motif of the enhancer-binding protein FleQ

(2013) C. Baraquet et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structure and Signaling Mechanism of a Zinc-Sensory Diguanylate Cyclase

(2013) Franziska Zähringer et al.   STRUCTURE

Nitric oxide-sensing H-NOX proteins govern bacterial communal behavior

(2013) Lars Plate et al.   TRENDS IN BIOCHEMICAL SCIENCES

Subcellular Clustering of the Phosphorylated WspR Response Regulator Protein Stimulates Its Diguanylate Cyclase Activity

(2013) V. Huangyutitham et al.   mBio

Oxygen promotes biofilm formation of Shewanella putrefaciens CN32 through a diguanylate cyclase and an adhesin

(2013) Chao Wu et al.   Scientific Reports

Thiol-Based Photocycle of the Blue and Teal Light-Sensing Cyanobacteriochrome Tlr1999

(2012) Gen Enomoto et al.   BIOCHEMISTRY

Nitric Oxide Regulation of Cyclic di-GMP Synthesis and Hydrolysis in Shewanella woodyi

(2012) Niu Liu et al.   BIOCHEMISTRY

A Bacterial Hemerythrin Domain Regulates the Activity of a Vibrio cholerae Diguanylate Cyclase

(2012) Ruth A. Schaller et al.   BIOCHEMISTRY

The Phosphodiesterase DipA (PA5017) Is Essential for Pseudomonas aeruginosa Biofilm Dispersion

(2012) A. B. Roy et al.   JOURNAL OF BACTERIOLOGY

Heme Flattening Is Sufficient for Signal Transduction in the H-NOX Family

(2012) Sandhya Muralidharan et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Nitric Oxide Modulates Bacterial Biofilm Formation through a Multicomponent Cyclic-di-GMP Signaling Network

(2012) Lars Plate et al.   MOLECULAR CELL

Surface sensing and lateral subcellular localization of WspA, the receptor in a chemosensory-like system leading to c-di-GMP production

(2012) Jennifer R. O'Connor et al.   MOLECULAR MICROBIOLOGY

Light-induced alteration of c-di-GMP level controls motility of Synechocystis sp. PCC 6803

(2012) Philipp Savakis et al.   MOLECULAR MICROBIOLOGY

Strain-dependent diversity in the Pseudomonas aeruginosa quorum-sensing regulon

(2012) S. Chugani et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cis-2-dodecenoic acid receptor RpfR links quorum-sensing signal perception with regulation of virulence through cyclic dimeric guanosine monophosphate turnover

(2012) Y. Deng et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Discrete Cyclic di-GMP-Dependent Control of Bacterial Predation versus Axenic Growth in Bdellovibrio bacteriovorus

(2012) Laura Hobley et al.   PLoS Pathogens

Leu65 in the heme distal side is critical for the stability of the Fe(II)–O2 complex of YddV, a globin-coupled oxygen sensor diguanylate cyclase

(2011) Kyosuke Nakajima et al.   JOURNAL OF INORGANIC BIOCHEMISTRY

Cyclic di-GMP Activation of Polynucleotide Phosphorylase Signal-Dependent RNA Processing

(2011) Jason R. Tuckerman et al.   JOURNAL OF MOLECULAR BIOLOGY

Surface contact stimulates the just-in-time deployment of bacterial adhesins

(2011) Guanglai Li et al.   MOLECULAR MICROBIOLOGY

Modulation of TRPA1 thermal sensitivity enables sensory discrimination in Drosophila

(2011) Kyeongjin Kang et al.   NATURE

Function, structure and mechanism of bacterial photosensory LOV proteins

(2011) Julien Herrou et al.   NATURE REVIEWS MICROBIOLOGY

Ligand-Binding PAS Domains in a Genomic, Cellular, and Structural Context

(2010) Jonathan T. Henry et al.   Annual Review of Microbiology

Mammalian Per-Arnt-Sim Proteins in Environmental Adaptation

(2010) Brian E. McIntosh et al.   Annual Review of Physiology

Modulation of Pseudomonas aeruginosa Biofilm Dispersal by a Cyclic-Di-GMP Phosphodiesterase with a Putative Hypoxia-Sensing Domain

(2010) S. An et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Important Roles of Tyr43 at the Putative Heme Distal Side in the Oxygen Recognition and Stability of the Fe(II)−O2Complex of YddV, a Globin-Coupled Heme-Based Oxygen Sensor Diguanylate Cyclase

(2010) Kenichi Kitanishi et al.   BIOCHEMISTRY

Biochemical and Physiological Characterization of a BLUF Protein−EAL Protein Complex Involved in Blue Light-Dependent Degradation of Cyclic Diguanylate in the Purple BacteriumRhodopseudomonas palustris

(2010) Takuya Kanazawa et al.   BIOCHEMISTRY

Sensor domains of two-component regulatory systems

(2010) Jonah Cheung et al.   CURRENT OPINION IN MICROBIOLOGY

Receiver domain structure and function in response regulator proteins

(2010) Robert B Bourret   CURRENT OPINION IN MICROBIOLOGY

Diversity of structure and function of response regulator output domains

(2010) Michael Y Galperin   CURRENT OPINION IN MICROBIOLOGY

Natural and Engineered Photoactivated Nucleotidyl Cyclases for Optogenetic Applications

(2010) Min-Hyung Ryu et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Structural Insight into the Mechanism of c-di-GMP Hydrolysis by EAL Domain Phosphodiesterases

(2010) Anatoli Tchigvintsev et al.   JOURNAL OF MOLECULAR BIOLOGY

Coupling between the BLUF and EAL domains in the blue light-regulated phosphodiesterase BlrP1

(2010) Maria Khrenova et al.   JOURNAL OF MOLECULAR MODELING

H-NOX regulation of c-di-GMP metabolism and biofilm formation in Legionella pneumophila

(2010) Hans K. Carlson et al.   MOLECULAR MICROBIOLOGY

A post-translational, c-di-GMP-dependent mechanism regulating flagellar motility

(2010) Xin Fang et al.   MOLECULAR MICROBIOLOGY

Optogenetics: controlling cell function with light

(2010) Erika Pastrana   NATURE METHODS

A Blue Light-inducible Phosphodiesterase Activity in the Cyanobacterium Synechococcus elongatus

(2010) Zhen Cao et al.   PHOTOCHEMISTRY AND PHOTOBIOLOGY

Asymmetrical Distribution of the Second Messenger c-di-GMP upon Bacterial Cell Division

(2010) M. Christen et al.   SCIENCE

Vibrio cholerae VpsT Regulates Matrix Production and Motility by Directly Sensing Cyclic di-GMP

(2010) P. V. Krasteva et al.   SCIENCE

Disulfides as Redox Switches: From Molecular Mechanisms to Functional Significance

(2009) Merridee A. Wouters et al.   ANTIOXIDANTS & REDOX SIGNALING

Structure and Insight into Blue Light-Induced Changes in the BlrP1 BLUF Domain†,‡

(2009) Qiong Wu et al.   BIOCHEMISTRY

A Flavin Cofactor-Binding PAS Domain Regulates c-di-GMP Synthesis inAxDGC2 fromAcetobacter xylinum

(2009) Yaning Qi et al.   BIOCHEMISTRY

An Oxygen-Sensing Diguanylate Cyclase and Phosphodiesterase Couple for c-di-GMP Control

(2009) Jason R. Tuckerman et al.   BIOCHEMISTRY

Chromosomal antioxidant genes have metal ion-specific roles as determinants of bacterial metal tolerance

(2009) Joe J. Harrison et al.   ENVIRONMENTAL MICROBIOLOGY

Role of Phe113 at the distal side of the heme domain of an oxygen-sensor (Ec DOS) in the characterization of the heme environment

(2009) Shinya Ito et al.   JOURNAL OF INORGANIC BIOCHEMISTRY

The FG loop of a heme-based gas sensor enzyme, Ec DOS, functions in heme binding, autoxidation and catalysis

(2009) Shinya Ito et al.   JOURNAL OF INORGANIC BIOCHEMISTRY

Globins Synthesize the Second Messenger Bis-(3′–5′)-Cyclic Diguanosine Monophosphate in Bacteria

(2009) Xuehua Wan et al.   JOURNAL OF MOLECULAR BIOLOGY

Determinants for the Activation and Autoinhibition of the Diguanylate Cyclase Response Regulator WspR

(2009) Nabanita De et al.   JOURNAL OF MOLECULAR BIOLOGY

Structure and mechanism of a bacterial light-regulated cyclic nucleotide phosphodiesterase

(2009) Thomas R. M. Barends et al.   NATURE

Principles of c-di-GMP signalling in bacteria

(2009) Regine Hengge   NATURE REVIEWS MICROBIOLOGY

Structural and mechanistic determinants of c-di-GMP signalling

(2009) Tilman Schirmer et al.   NATURE REVIEWS MICROBIOLOGY

Cyclic Nucleotide Binding GAF Domains from Phosphodiesterases: Structural and Mechanistic Insights

(2009) Clemens C. Heikaus et al.   STRUCTURE

Structure and Signaling Mechanism of Per-ARNT-Sim Domains

(2009) Andreas Möglich et al.   STRUCTURE

Connecting Quorum Sensing, c-di-GMP, Pel Polysaccharide, and Biofilm Formation in Pseudomonas aeruginosa through Tyrosine Phosphatase TpbA (PA3885)

(2009) Akihiro Ueda et al.   PLoS Pathogens

Photodynamics of blue-light-regulated phosphodiesterase BlrP1 protein from Klebsiella pneumoniae and its photoreceptor BLUF domain

(2008) A. Tyagi et al.   CHEMICAL PHYSICS

Quorum Sensing Controls Biofilm Formation in Vibrio cholerae through Modulation of Cyclic Di-GMP Levels and Repression of vpsT

(2008) C. M. Waters et al.   JOURNAL OF BACTERIOLOGY

Solution Structure of the cGMP Binding GAF Domain from Phosphodiesterase 5

(2008) Clemens C. Heikaus et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Cyanobacteriochromes: a new superfamily of tetrapyrrole-binding photoreceptors in cyanobacteria

(2008) Masahiko Ikeuchi et al.   PHOTOCHEMICAL & PHOTOBIOLOGICAL SCIENCES

Phosphorylation-Independent Regulation of the Diguanylate Cyclase WspR

(2008) Nabanita De et al.   PLOS BIOLOGY