Influence of the N-terminal segment and the PHY-tongue element on light-regulation in bacteriophytochromes

The Photoconversion of Phytochrome Includes an Unproductive Shunt Reaction Pathway

(2018) David Buhrke et al.   CHEMPHYSCHEM

Structure-guided design and functional characterization of an artificial red light–regulated guanylate/adenylate cyclase for optogenetic applications

(2018) Stefan Etzl et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Asymmetric activation mechanism of a homodimeric red light-regulated photoreceptor

(2018) Geoffrey Gourinchas et al.   eLife

3D Structures of Plant Phytochrome A as Pr and Pfr From Solid-State NMR: Implications for Molecular Function

(2018) Chen Song et al.   Frontiers in Plant Science

Chromophore–Protein Interplay during the Phytochrome Photocycle Revealed by Step-Scan FTIR Spectroscopy

(2018) Janne A. Ihalainen et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Structural snapshot of a bacterial phytochrome in its functional intermediate state

(2018) Andrea Schmidt et al.   Nature Communications

Solving Blue Light Riddles: New Lessons from Flavin-binding LOV Photoreceptors

(2017) Aba Losi et al.   PHOTOCHEMISTRY AND PHOTOBIOLOGY

Long-range allosteric signaling in red light–regulated diguanylyl cyclases

(2017) Geoffrey Gourinchas et al.   Science Advances

Photosensing and Thermosensing by Phytochrome B Require Both Proximal and Distal Allosteric Features within the Dimeric Photoreceptor

(2017) E. Sethe Burgie et al.   Scientific Reports

A Phytochrome Sensory Domain Permits Receptor Activation by Red Light

(2016) Eva Reichhart et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Structure of the Full-Length Bacteriophytochrome from the Plant Pathogen Xanthomonas campestris Provides Clues to its Long-Range Signaling Mechanism

(2016) Lisandro Horacio Otero et al.   JOURNAL OF MOLECULAR BIOLOGY

From photon to signal in phytochromes: similarities and differences between prokaryotic and plant phytochromes

(2016) Soshichiro Nagano   JOURNAL OF PLANT RESEARCH

Crystal Structure of Deinococcus Phytochrome in the Photoactivated State Reveals a Cascade of Structural Rearrangements during Photoconversion

(2016) E. Sethe Burgie et al.   STRUCTURE

Structural photoactivation of a full-length bacterial phytochrome

(2016) A. Bjo rling et al.   Science Advances

The family of phytochrome-like photoreceptors: diverse, complex and multi-colored, but very useful

(2015) Katrin Anders et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Crystallographic and Electron Microscopic Analyses of a Bacterial Phytochrome Reveal Local and Global Rearrangements during Photoconversion

(2014) E. Sethe Burgie et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Signal amplification and transduction in phytochrome photosensors

(2014) Heikki Takala et al.   NATURE

Engineering adenylate cyclases regulated by near-infrared window light

(2014) M.-H. Ryu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Crystal structure of the photosensing module from a red/far-red light-absorbing plant phytochrome

(2014) E. S. Burgie et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Marine algae and land plants share conserved phytochrome signaling systems

(2014) D. Duanmu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Engineering of a red-light-activated human cAMP/cGMP-specific phosphodiesterase

(2014) C. Gasser et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Engineering of bacterial phytochromes for near-infrared imaging, sensing, and light-control in mammals

(2013) Kiryl D. Piatkevich et al.   CHEMICAL SOCIETY REVIEWS

Structure of the Biliverdin Cofactor in the Pfr State of Bathy and Prototypical Phytochromes

(2013) Johannes Salewski et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Unusual Spectral Properties of Bacteriophytochrome Agp2 Result from a Deprotonation of the Chromophore in the Red-absorbing Form Pr

(2013) Benjamin Zienicke et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Structure of the Cyanobacterial Phytochrome 2 Photosensor Implies a Tryptophan Switch for Phytochrome Signaling

(2013) Katrin Anders et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Structural basis of histidine kinase autophosphorylation deduced by integrating genomics, molecular dynamics, and mutagenesis

(2012) A. E. Dago et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structure of a Bacteriophytochrome and Light-Stimulated Protomer Swapping with a Gene Repressor

(2012) Dom Bellini et al.   STRUCTURE

Bacterial phytochromes: More than meets the light

(2011) Michele E. Auldridge et al.   CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY

Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega

(2011) F. Sievers et al.   Molecular Systems Biology

Temperature-scan cryocrystallography reveals reaction intermediates in bacteriophytochrome

(2011) Xiaojing Yang et al.   NATURE

Light helps bacteria make important lifestyle decisions

(2011) Mark Gomelsky et al.   TRENDS IN MICROBIOLOGY

Structural basis for the photoconversion of a phytochrome to the activated Pfr form

(2010) Andrew T. Ulijasz et al.   NATURE

Proton-transfer and hydrogen-bond interactions determine fluorescence quantum yield and photochemical efficiency of bacteriophytochrome

(2010) K. C. Toh et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Monitoring of diguanylate cyclase activity and of cyclic-di-GMP biosynthesis by whole-cell assays suitable for high-throughput screening of biofilm inhibitors

(2009) Davide Antoniani et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Characterization of the Covalent and Noncovalent Adducts of Agp1 Phytochrome Assembled with Biliverdin and Phycocyanobilin by Circular Dichroism and Flash Photolysis

(2009) Berthold Borucki et al.   BIOCHEMISTRY

Jalview Version 2--a multiple sequence alignment editor and analysis workbench

(2009) A. M. Waterhouse et al.   BIOINFORMATICS

Determinants for the Activation and Autoinhibition of the Diguanylate Cyclase Response Regulator WspR

(2009) Nabanita De et al.   JOURNAL OF MOLECULAR BIOLOGY

Structural and mechanistic determinants of c-di-GMP signalling

(2009) Tilman Schirmer et al.   NATURE REVIEWS MICROBIOLOGY

Conformational differences between the Pfr and Pr states in Pseudomonas aeruginosa bacteriophytochrome

(2009) X. Yang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Residues Clustered in the Light-Sensing Knot of Phytochrome B are Necessary for Conformer-Specific Binding to Signaling Partner PIF3

(2009) Elise A. Kikis et al.   PLoS Genetics

Mutational Analysis ofDeinococcus radioduransBacteriophytochrome Reveals Key Amino Acids Necessary for the Photochromicity and Proton Exchange Cycle of Phytochromes

(2008) Jeremiah R. Wagner et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The structure of a complete phytochrome sensory module in the Pr ground state

(2008) L.-O. Essen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Crystal structure of Pseudomonas aeruginosa bacteriophytochrome: Photoconversion and signal transduction

(2008) X. Yang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA