Analyses of viral genomes for G-quadruplex forming sequences reveal their correlation with the type of infection

G-quadruplexes in H1N1 influenza genomes

(2021) Václav Brázda et al.   BMC GENOMICS

Tracing dsDNA Virus–Host Coevolution through Correlation of Their G-Quadruplex-Forming Sequences

(2021) Natália Bohálová et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Ebola virus disease

(2020) Shevin T. Jacob et al.   Nature Reviews Disease Primers

Herpesviral Latency—Common Themes

(2020) Magdalena Weidner-Glunde et al.   Pathogens

Discovery of G-quadruplex-forming sequences in SARS-CoV-2

(2020) Danyang Ji et al.   BRIEFINGS IN BIOINFORMATICS

Genome-wide analysis reveals a regulatory role for G-quadruplexes during Adenovirus multiplication

(2020) Prativa Majee et al.   VIRUS RESEARCH

In-Depth Bioinformatic Analyses of Nidovirales Including Human SARS-CoV-2, SARS-CoV, MERS-CoV Viruses Suggest Important Roles of Non-canonical Nucleic Acid Structures in Their Lifecycles

(2020) Martin Bartas et al.   Frontiers in Microbiology

G-Quadruplexes in the Archaea Domain

(2020) Václav Brázda et al.   Biomolecules

Analysis of G-quadruplexes upstream of herpesvirus miRNAs: evidence of G-quadruplex mediated regulation of KSHV miR-K12–1-9,11 cluster and HCMV miR-US33

(2020) Shivani Kumar et al.   BMC Molecular and Cell Biology

Colocalization of m6A and G-Quadruplex-Forming Sequences in Viral RNA (HIV, Zika, Hepatitis B, and SV40) Suggests Topological Control of Adenosine N6-Methylation

(2019) Aaron M. Fleming et al.   ACS Central Science

Recent Progress of Targeted G-Quadruplex-Preferred Ligands Toward Cancer Therapy

(2019) Sefan Asamitsu et al.   MOLECULES

Intensive Distribution of G2-Quaduplexes in the Pseudorabies Virus Genome and Their Sensitivity to Cations and G-Quadruplex Ligands

(2019) Hui Deng et al.   MOLECULES

G4Hunter web application: a web server for G-quadruplex prediction

(2019) Václav Brázda et al.   BIOINFORMATICS

Relationship Between G-Quadruplex Sequence Composition in Viruses and Their Hosts

(2019) Puig Lombardi et al.   MOLECULES

Changes to virus taxonomy and the International Code of Virus Classification and Nomenclature ratified by the International Committee on Taxonomy of Viruses (2019)

(2019) Peter J. Walker et al.   ARCHIVES OF VIROLOGY

The diverse structural landscape of quadruplexes

(2019) Helen L. Lightfoot et al.   FEBS LETTERS

The Clinical Perspective on Hepatitis E

(2019) Thomas Horvatits et al.   Viruses-Basel

G-quadruplex dynamics contribute to regulation of mitochondrial gene expression

(2019) M. Falabella et al.   Scientific Reports

Adenovirus persistence, reactivation, and clinical management

(2019) Thomas Lion   FEBS LETTERS

The Role of Emerging and Neglected Viruses in the Etiology of Hepatitis

(2019) Anna Mrzljak et al.   Current Infectious Disease Reports

Severe neurologic disease and chick mortality in crested screamers ( Chauna torquata ) infected with a novel Gyrovirus

(2018) Tony L. Goldberg et al.   VIROLOGY

RNA synthesis is modulated by G-quadruplex formation in Hepatitis C virus negative RNA strand

(2018) Jaubert Chloé et al.   Scientific Reports

Pac1 Signals of Human Herpesviruses Contain a Highly Conserved G-Quadruplex Motif

(2018) Banhi Biswas et al.   ACS Infectious Diseases

Influenza

(2018) Florian Krammer et al.   Nature Reviews Disease Primers

Persistent Marburg Virus Infection in the Testes of Nonhuman Primate Survivors

(2018) Kayla M. Coffin et al.   Cell Host & Microbe

Case studies on potential G-quadruplex-forming sequences from the bacterial orders Deinococcales and Thermales derived from a survey of published genomes

(2018) Yun Ding et al.   Scientific Reports

Biology of viral satellites and their role in pathogenesis

(2018) Prabu Gnanasekaran et al.   Current Opinion in Virology

Practical Guidance for Clinical Microbiology Laboratories: Viruses Causing Acute Respiratory Tract Infections

(2018) Carmen L. Charlton et al.   CLINICAL MICROBIOLOGY REVIEWS

Binding of cellular nucleolin with the viral core RNA G-quadruplex structure suppresses HCV replication

(2018) Wen-Xiu Bian et al.   NUCLEIC ACIDS RESEARCH

G-quadruplex forming sequences in the genome of all known human viruses: A comprehensive guide

(2018) Enrico Lavezzo et al.   PLoS Computational Biology

Interferon-γ-inducible protein 16 (IFI16) is required for the maintenance of Epstein-Barr virus latency

(2017) Gina Pisano et al.   Virology Journal

Hepatitis Delta Virus: Replication Strategy and Upcoming Therapeutic Options for a Neglected Human Pathogen

(2017) Florian Lempp et al.   Viruses-Basel

Nucleolin directly mediates Epstein-Barr virus immune evasion through binding to G-quadruplexes of EBNA1 mRNA

(2017) María José Lista et al.   Nature Communications

Genome-wide analysis of G-quadruplexes in herpesvirus genomes

(2016) Banhi Biswas et al.   BMC GENOMICS

Epigenetics and Genetics of Viral Latency

(2016) Paul M. Lieberman   Cell Host & Microbe

G-quadruplex-interacting compounds alter latent DNA replication and episomal persistence of KSHV

(2016) Advaitha Madireddy et al.   NUCLEIC ACIDS RESEARCH

Re-evaluation of G-quadruplex propensity with G4Hunter

(2016) Amina Bedrat et al.   NUCLEIC ACIDS RESEARCH

Linking Virus Genomes with Host Taxonomy

(2016) Tomoko Mihara et al.   Viruses-Basel

G4IPDB: A database for G-quadruplex structure forming nucleic acid interacting proteins

(2016) Subodh Kumar Mishra et al.   Scientific Reports

Zika Virus Genomic RNA Possesses Conserved G-Quadruplexes Characteristic of the Flaviviridae Family

(2016) Aaron M. Fleming et al.   ACS Infectious Diseases

IFI16 Preferentially Binds to DNA with Quadruplex Structure and Enhances DNA Quadruplex Formation

(2016) Lucia Hároníková et al.   PLoS One

The Herpes Simplex Virus-1 genome contains multiple clusters of repeated G-quadruplex: Implications for the antiviral activity of a G-quadruplex ligand

(2015) Sara Artusi et al.   ANTIVIRAL RESEARCH

Human anelloviruses: an update of molecular, epidemiological and clinical aspects

(2015) Sonia Spandole et al.   ARCHIVES OF VIROLOGY

Nucleolin stabilizes G-quadruplex structures folded by the LTR promoter and silences HIV-1 viral transcription

(2015) Elena Tosoni et al.   NUCLEIC ACIDS RESEARCH

G-quadruplexes and their regulatory roles in biology

(2015) Daniela Rhodes et al.   NUCLEIC ACIDS RESEARCH

A G-quadruplex-binding macrodomain within the “SARS-unique domain” is essential for the activity of the SARS-coronavirus replication–transcription complex

(2015) Yuri Kusov et al.   VIROLOGY

G-quadruplexes regulate Epstein-Barr virus–encoded nuclear antigen 1 mRNA translation

(2014) Pierre Murat et al.   Nature Chemical Biology

mRNA Structural Constraints on EBNA1 Synthesis Impact on In Vivo Antigen Presentation and Early Priming of CD8+ T Cells

(2014) Judy T. Tellam et al.   PLoS Pathogens

The role of viral persistence in flavivirus biology

(2014) Luwanika Mlera et al.   Pathogens and Disease

Human Papillomavirus G-Quadruplexes

(2013) Katarína Tlučková et al.   BIOCHEMISTRY

A Dynamic G-Quadruplex Region Regulates the HIV-1 Long Terminal Repeat Promoter

(2013) Rosalba Perrone et al.   JOURNAL OF MEDICINAL CHEMISTRY

Formation of a Unique Cluster of G-Quadruplex Structures in the HIV-1 nef Coding Region: Implications for Antiviral Activity

(2013) Rosalba Perrone et al.   PLoS One

Pandoraviruses: Amoeba Viruses with Genomes Up to 2.5 Mb Reaching That of Parasitic Eukaryotes

(2013) N. Philippe et al.   SCIENCE

Prolonged Influenza Virus Shedding and Emergence of Antiviral Resistance in Immunocompromised Patients and Ferrets

(2013) Erhard van der Vries et al.   PLoS Pathogens

HSV Infection Induces Production of ROS, which Potentiate Signaling from Pattern Recognition Receptors: Role for S-glutathionylation of TRAF3 and 6

(2011) Regina Gonzalez-Dosal et al.   PLoS Pathogens

The C-Terminus of Nucleolin Promotes the Formation of the c-MYCG-Quadruplex and Inhibits c-MYCPromoter Activity

(2010) Verónica González et al.   BIOCHEMISTRY

Viroids: self-replicating, mobile, and fast-evolving noncoding regulatory RNAs

(2010) Biao Ding   Wiley Interdisciplinary Reviews-RNA

Persistent Infection with West Nile Virus Years after Initial Infection

(2009) Kristy Murray et al.   JOURNAL OF INFECTIOUS DISEASES

Common Threads in Persistent Viral Infections

(2009) M. Kane et al.   JOURNAL OF VIROLOGY

Isolation and Characterization of Adenoviruses Persistently Shed from the Gastrointestinal Tract of Non-Human Primates

(2009) Soumitra Roy et al.   PLoS Pathogens

Rotavirus diarrhea in bovines and other domestic animals

(2008) K. Dhama et al.   VETERINARY RESEARCH COMMUNICATIONS