G-quadruplexes in H1N1 influenza genomes

A guide to computational methods for G-quadruplex prediction

(2020) Emilia Puig Lombardi et al.   NUCLEIC ACIDS RESEARCH

The regulation and functions of DNA and RNA G-quadruplexes

(2020) Dhaval Varshney et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Inhibition of Influenza A virus propagation by benzoselenoxanthenes stabilizing TMPRSS2 Gene G-quadruplex and hence down-regulating TMPRSS2 expression

(2020) Li-Wen Shen et al.   Scientific Reports

Discovery of G-quadruplex-forming sequences in SARS-CoV-2

(2020) Danyang Ji et al.   BRIEFINGS IN BIOINFORMATICS

Role of RNA Guanine Quadruplexes in Favoring the Dimerization of SARS Unique Domain in Coronaviruses

(2020) Cécilia Hognon et al.   Journal of Physical Chemistry Letters

Single-molecule visualization of DNA G-quadruplex formation in live cells

(2020) Marco Di Antonio et al.   Nature Chemistry

Genome wide distribution of G-quadruplexes and their impact on gene expression in malaria parasites

(2020) Elodie Gazanion et al.   PLoS Genetics

In-Depth Bioinformatic Analyses of Nidovirales Including Human SARS-CoV-2, SARS-CoV, MERS-CoV Viruses Suggest Important Roles of Non-canonical Nucleic Acid Structures in Their Lifecycles

(2020) Martin Bartas et al.   Frontiers in Microbiology

G4Hunter web application: a web server for G-quadruplex prediction

(2019) Václav Brázda et al.   BIOINFORMATICS

The Presence and Localization of G-Quadruplex Forming Sequences in the Domain of Bacteria

(2019) Martin Bartas et al.   MOLECULES

Involvement of G-quadruplex regions in mammalian replication origin activity

(2019) Paulina Prorok et al.   Nature Communications

Divergent distributions of inverted repeats and G-quadruplex forming sequences in Saccharomyces cerevisiae

(2019) Michaela Čutová et al.   GENOMICS

Cell Entry of Influenza A Viruses: Sweet Talk between HA and Ca V 1.2

(2018) Markus Hoffmann et al.   Cell Host & Microbe

G-quadruplexes and G-quadruplex ligands: targets and tools in antiviral therapy

(2018) Emanuela Ruggiero et al.   NUCLEIC ACIDS RESEARCH

Oligomerization of bacterially expressed H1N1 recombinant hemagglutinin contributes to protection against viral challenge

(2018) Tess E. Kuenstling et al.   Scientific Reports

Database resources of the National Center for Biotechnology Information

(2018) Eric W Sayers et al.   NUCLEIC ACIDS RESEARCH

G-quadruplex forming sequences in the genome of all known human viruses: A comprehensive guide

(2018) Enrico Lavezzo et al.   PLoS Computational Biology

Novel antigenic shift in HA sequences of H1N1 viruses detected by big data analysis

(2017) Ruiying Zhang et al.   INFECTION GENETICS AND EVOLUTION

A core extended naphtalene diimide G-quadruplex ligand potently inhibits herpes simplex virus 1 replication

(2017) Sara Callegaro et al.   Scientific Reports

Structure, properties, and biological relevance of the DNA and RNA G-quadruplexes: Overview 50 years after their discovery

(2016) N. G. Dolinnaya et al.   BIOCHEMISTRY-MOSCOW

The PB1 segment of an influenza A virus H1N1 2009pdm isolate enhances the replication efficiency of specific influenza vaccine strains in cell culture and embryonated eggs

(2016) Ahmed Mostafa et al.   JOURNAL OF GENERAL VIROLOGY

Re-evaluation of G-quadruplex propensity with G4Hunter

(2016) Amina Bedrat et al.   NUCLEIC ACIDS RESEARCH

The M Segment of the 2009 Pandemic Influenza Virus Confers Increased Neuraminidase Activity, Filamentous Morphology, and Efficient Contact Transmissibility to A/Puerto Rico/8/1934-Based Reassortant Viruses

(2014) P. J. Campbell et al.   JOURNAL OF VIROLOGY

At the centre: influenza A virus ribonucleoproteins

(2014) Amie J. Eisfeld et al.   NATURE REVIEWS MICROBIOLOGY

Thioflavin T as a fluorescence light-up probe for G4 formation

(2014) Amandine Renaud de la Faverie et al.   NUCLEIC ACIDS RESEARCH

G-quadruplexes in viruses: function and potential therapeutic applications

(2014) Mathieu Métifiot et al.   NUCLEIC ACIDS RESEARCH

Cruciform structures are a common DNA feature important for regulating biological processes

(2011) Václav Brázda et al.   BMC MOLECULAR BIOLOGY

Structural Basis of Preexisting Immunity to the 2009 H1N1 Pandemic Influenza Virus

(2010) R. Xu et al.   SCIENCE

2009 H1N1 Influenza

(2009) Seth J. Sullivan et al.   MAYO CLINIC PROCEEDINGS

Origins and evolutionary genomics of the 2009 swine-origin H1N1 influenza A epidemic

(2009) Gavin J. D. Smith et al.   NATURE

Emergence and pandemic potential of swine-origin H1N1 influenza virus

(2009) Gabriele Neumann et al.   NATURE

Historical Perspective — Emergence of Influenza A (H1N1) Viruses

(2009) Shanta M. Zimmer et al.   NEW ENGLAND JOURNAL OF MEDICINE

Guanine quadruplex formation by RNA/DNA hybrid analogs ofOxytrichatelomere G4T4G4fragment

(2008) Jitka Vondrušková et al.   BIOPOLYMERS