High‐quality genome‐scale metabolic model of Aurantiochytrium sp. T66
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Title
High‐quality genome‐scale metabolic model of
Aurantiochytrium
sp. T66
Authors
Keywords
-
Journal
BIOTECHNOLOGY AND BIOENGINEERING
Volume -, Issue -, Pages -
Publisher
Wiley
Online
2021-02-24
DOI
10.1002/bit.27726
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Note: Only part of the references are listed.- MEMOTE for standardized genome-scale metabolic model testing
- (2020) Christian Lieven et al. NATURE BIOTECHNOLOGY
- Assessment of Fatty Acids Profile and Omega-3 Polyunsaturated Fatty Acid Production by the Oleaginous Marine Thraustochytrid Aurantiochytrium sp. T66 Cultivated on Volatile Fatty Acids
- (2020) Alok Patel et al. Biomolecules
- Dynamic flux balance analysis of biomass and lipid production by Antarctic thraustochytrid Oblongichytrium sp. RT2316‐13
- (2020) Carolina Shene et al. BIOTECHNOLOGY AND BIOENGINEERING
- Creation and analysis of biochemical constraint-based models using the COBRA Toolbox v.3.0
- (2019) Laurent Heirendt et al. Nature Protocols
- ModelExplorer - software for visual inspection and inconsistency correction of genome-scale metabolic reconstructions
- (2019) Nikolay Martyushenko et al. BMC BIOINFORMATICS
- In silico identification of metabolic engineering strategies for improved lipid production in Yarrowia lipolytica by genome-scale metabolic modeling
- (2019) Minsuk Kim et al. Biotechnology for Biofuels
- Genome‐scale model of Rhodotorula toruloides metabolism
- (2019) Ievgeniia A. Tiukova et al. BIOTECHNOLOGY AND BIOENGINEERING
- Comprehensive analysis of a metabolic model for lipid production in Rhodosporidium toruloides
- (2018) María Teresita Castañeda et al. JOURNAL OF BIOTECHNOLOGY
- Fast automated reconstruction of genome-scale metabolic models for microbial species and communities
- (2018) Daniel Machado et al. NUCLEIC ACIDS RESEARCH
- Advances in metabolic modeling of oleaginous microalgae
- (2018) Juan D. Tibocha-Bonilla et al. Biotechnology for Biofuels
- Are Thraustochytrids algae?
- (2017) Ben Leyland et al. Fungal Biology
- Erroneous energy-generating cycles in published genome scale metabolic networks: Identification and removal
- (2017) Claus Jonathan Fritzemeier et al. PLoS Computational Biology
- Thraustochytrids as production organisms for docosahexaenoic acid (DHA), squalene, and carotenoids
- (2016) Inga Marie Aasen et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Genome-scale metabolic modeling and in silico analysis of lipid accumulating yeastCandida tropicalisfor dicarboxylic acid production
- (2016) Pranjul Mishra et al. BIOTECHNOLOGY AND BIOENGINEERING
- Biosynthetic mechanism of very long chain polyunsaturated fatty acids inThraustochytrium sp.26185
- (2016) Dauenpen Meesapyodsuk et al. JOURNAL OF LIPID RESEARCH
- Genome-Scale Model Reveals Metabolic Basis of Biomass Partitioning in a Model Diatom
- (2016) Jennifer Levering et al. PLoS One
- DHA Effects in Brain Development and Function
- (2016) Lotte Lauritzen et al. Nutrients
- A strategy for the highly efficient production of docosahexaenoic acid by Aurantiochytrium limacinum SR21 using glucose and glycerol as the mixed carbon sources
- (2015) Jing Li et al. BIORESOURCE TECHNOLOGY
- Reconstruction and analysis of the genome-scale metabolic model of schizochytrium limacinum SR21 for docosahexaenoic acid production
- (2015) Chao Ye et al. BMC GENOMICS
- Reconstruction and analysis of a genome-scale metabolic model of the oleaginous fungus Mortierella alpina
- (2015) Chao Ye et al. BMC Systems Biology
- Pathway Tools version 19.0 update: software for pathway/genome informatics and systems biology
- (2015) Peter D. Karp et al. BRIEFINGS IN BIOINFORMATICS
- Using Genome-scale Models to Predict Biological Capabilities
- (2015) Edward J. O’Brien et al. CELL
- Engineering of oleaginous organisms for lipid production
- (2015) Jennifer Levering et al. CURRENT OPINION IN BIOTECHNOLOGY
- In SilicoConstraint-Based Strain Optimization Methods: the Quest for Optimal Cell Factories
- (2015) Paulo Maia et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
- Fatty acid biosynthesis revisited: structure elucidation and metabolic engineering
- (2015) Joris Beld et al. Molecular BioSystems
- GenBank
- (2015) Karen Clark et al. NUCLEIC ACIDS RESEARCH
- Reconstructing genome-scale metabolic models with merlin
- (2015) Oscar Dias et al. NUCLEIC ACIDS RESEARCH
- The Transporter Classification Database (TCDB): recent advances
- (2015) Milton H. Saier et al. NUCLEIC ACIDS RESEARCH
- BiGG Models: A platform for integrating, standardizing and sharing genome-scale models
- (2015) Zachary A. King et al. NUCLEIC ACIDS RESEARCH
- Constraint-based models predict metabolic and associated cellular functions
- (2014) Aarash Bordbar et al. NATURE REVIEWS GENETICS
- Comparative Genome-Scale Reconstruction of Gapless Metabolic Networks for Present and Ancestral Species
- (2014) Esa Pitkänen et al. PLoS Computational Biology
- MetaNetX.org: a website and repository for accessing, analysing and manipulating metabolic networks
- (2013) M. Ganter et al. BIOINFORMATICS
- Genome-scale analysis of the metabolic networks of oleaginous Zygomycete fungi
- (2013) Wanwipa Vongsangnak et al. GENE
- The RAVEN Toolbox and Its Use for Generating a Genome-scale Metabolic Model for Penicillium chrysogenum
- (2013) Rasmus Agren et al. PLoS Computational Biology
- A fermentation strategy for producing docosahexaenoic acid in Aurantiochytrium limacinum SR21 and increasing C22:6 proportions in total fatty acid
- (2012) Ting Yen Huang et al. BIORESOURCE TECHNOLOGY
- A genome-scale metabolic model of the lipid-accumulating yeast Yarrowia lipolytica
- (2012) Nicolas Loira et al. BMC Systems Biology
- Reconstruction and In Silico Analysis of Metabolic Network for an Oleaginous Yeast, Yarrowia lipolytica
- (2012) Pengcheng Pan et al. PLoS One
- Omega-3 Fatty Acids EPA and DHA: Health Benefits Throughout Life
- (2012) Danielle Swanson et al. Advances in Nutrition
- The electron transfer flavoprotein: Ubiquinone oxidoreductases
- (2010) Nicholas J. Watmough et al. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
- The biomass objective function
- (2010) Adam M Feist et al. CURRENT OPINION IN MICROBIOLOGY
- High-throughput generation, optimization and analysis of genome-scale metabolic models
- (2010) Christopher S Henry et al. NATURE BIOTECHNOLOGY
- What is flux balance analysis?
- (2010) Jeffrey D Orth et al. NATURE BIOTECHNOLOGY
- A protocol for generating a high-quality genome-scale metabolic reconstruction
- (2010) Ines Thiele et al. Nature Protocols
- Fish-oil supplementation induces antiinflammatory gene expression profiles in human blood mononuclear cells
- (2009) Mark Bouwens et al. AMERICAN JOURNAL OF CLINICAL NUTRITION
- Effect of eicosapentaenoic and docosahexaenoic acid on resting and exercise-induced inflammatory and oxidative stress biomarkers: a randomized, placebo controlled, cross-over study
- (2009) Richard J Bloomer et al. Lipids in Health and Disease
- Accumulation of docosahexaenoic acid-rich lipid in thraustochytrid Aurantiochytrium sp. strain T66: effects of N and P starvation and O2 limitation
- (2008) Anita N. Jakobsen et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- HECTAR: A method to predict subcellular targeting in heterokonts
- (2008) Bernhard Gschloessl et al. BMC BIOINFORMATICS
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