The genetic structure and adaptation of Andean highlanders and Amazonians are influenced by the interplay between geography and culture

A Paleogenomic Reconstruction of the Deep Population History of the Andes

(2020) Nathan Nakatsuka et al.   CELL

The history behind the mosaic of the Americas

(2020) Marla Mendes et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

Human Genetic Adaptation to High Altitude: Evidence from the Andes

(2019) Colleen G. Julian et al.   Genes

Dissecting the Pre-Columbian genomic ancestry of Native Americans along the Andes-Amazonia divide

(2019) Guido Alberto Gnecchi-Ruscone et al.   MOLECULAR BIOLOGY AND EVOLUTION

Cardiac Reprogramming Factors Synergistically Activate Genome-wide Cardiogenic Stage-Specific Enhancers

(2019) Hisayuki Hashimoto et al.   Cell Stem Cell

Hand2 Selectively Reorganizes Chromatin Accessibility to Induce Pacemaker-like Transcriptional Reprogramming

(2019) Antonio Fernandez-Perez et al.   Cell Reports

Extra‐oral plasmablastic lymphomas in a high HIV endemic area

(2019) Shabnum Meer et al.   HISTOPATHOLOGY

Long non-coding RNA HAND2-AS1 downregulation predicts poor survival of patients with end-stage dilated cardiomyopathy

(2019) Xianlu Cheng et al.   JOURNAL OF INTERNATIONAL MEDICAL RESEARCH

The current genomic landscape of western South America: Andes, Amazonia and Pacific Coast

(2019) Chiara Barbieri et al.   MOLECULAR BIOLOGY AND EVOLUTION

Pre-existing medical disorders as risk factors for preeclampsia: an exploratory case-control study

(2019) Linglan Pan et al.   HYPERTENSION IN PREGNANCY

Use of >100,000 NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium whole genome sequences improves imputation quality and detection of rare variant associations in admixed African and Hispanic/Latino populations

(2019) Madeline H. Kowalski et al.   PLoS Genetics

Dual oxidase: a novel therapeutic target in allergic disease

(2018) Albert van der Vliet et al.   BRITISH JOURNAL OF PHARMACOLOGY

EPIGEN-Brazil Initiative resources: a Latin American imputation panel and the Scientific Workflow

(2018) Wagner C.S. Magalhães et al.   GENOME RESEARCH

Evolutionary genomic dynamics of Peruvians before, during, and after the Inca Empire

(2018) Daniel N. Harris et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Selection scan reveals three new loci related to high altitude adaptation in Native Andeans

(2018) Vanessa C. Jacovas et al.   Scientific Reports

Reconstructing the Deep Population History of Central and South America

(2018) Cosimo Posth et al.   CELL

Latin Americans show wide-spread Converso ancestry and imprint of local Native ancestry on physical appearance

(2018) Juan-Camilo Chacón-Duque et al.   Nature Communications

The genetic prehistory of the Andean highlands 7000 years BP though European contact

(2018) John Lindo et al.   Science Advances

Measuring high-altitude adaptation

(2017) Lorna G. Moore   JOURNAL OF APPLIED PHYSIOLOGY

The Changed Proportion of CD45RA+/CD45RO+ T Cells in Chronic Hepatitis C Patients During Pegylated Interferon-α with Ribavirin Therapy

(2017) Jung-Lung Hsiao et al.   JOURNAL OF INTERFERON AND CYTOKINE RESEARCH

Genome-wide association study of red blood cell traits in Hispanics/Latinos: The Hispanic Community Health Study/Study of Latinos

(2017) Chani J. Hodonsky et al.   PLoS Genetics

Elimination of iodine deficiency disorders from the Americas: a public health triumph

(2017) Eduardo A Pretell et al.   Lancet Diabetes & Endocrinology

Natural course of congenital hypothyroidism by dual oxidase 2 mutations from the neonatal period through puberty

(2016) Yoshihiro Maruo et al.   EUROPEAN JOURNAL OF ENDOCRINOLOGY

Transcription of the non-coding RNA upperhand controls Hand2 expression and heart development

(2016) Kelly M. Anderson et al.   NATURE

The Simons Genome Diversity Project: 300 genomes from 142 diverse populations

(2016) Swapan Mallick et al.   NATURE

Ancient DNA Analysis Suggests Negligible Impact of the Wari Empire Expansion in Peru’s Central Coast during the Middle Horizon

(2016) Guido Valverde et al.   PLoS One

Going global by adapting local: A review of recent human adaptation

(2016) S. Fan et al.   SCIENCE

The Great Migration and African-American Genomic Diversity

(2016) Soheil Baharian et al.   PLoS Genetics

Accurate Non-parametric Estimation of Recent Effective Population Size from Segments of Identity by Descent

(2015) Sharon R. Browning et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Integrating, summarizing and visualizing GWAS-hits and human diversity with DANCE (Disease-ANCEstry networks)

(2015) Gilderlanio S. Araújo et al.   BIOINFORMATICS

The Extracellular A-loop of Dual Oxidases Affects the Specificity of Reactive Oxygen Species Release

(2015) Takehiko Ueyama et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The fine-scale genetic structure of the British population

(2015) Stephen Leslie et al.   NATURE

New insights into a late-Pleistocene human occupation in America: The Vale da Pedra Furada complete chronological study

(2015) C. Lahaye et al.   Quaternary Geochronology

Genomic evidence for the Pleistocene and recent population history of Native Americans

(2015) M. Raghavan et al.   SCIENCE

Viral Interference with Functions of the Cellular Receptor Tyrosine Phosphatase CD45

(2015) Nadine Thiel et al.   Viruses-Basel

Detection of Convergent Genome-Wide Signals of Adaptation to Tropical Forests in Humans

(2015) Carlos Eduardo G. Amorim et al.   PLoS One

New Archaeological Evidence for an Early Human Presence at Monte Verde, Chile

(2015) Tom D. Dillehay et al.   PLoS One

Bayesian inferences suggest that Amazon Yunga Natives diverged from Andeans less than 5000 ybp: implications for South American prehistory

(2014) Marilia O Scliar et al.   BMC EVOLUTIONARY BIOLOGY

selscan: An Efficient Multithreaded Program to Perform EHH-Based Scans for Positive Selection

(2014) Z. A. Szpiech et al.   MOLECULAR BIOLOGY AND EVOLUTION

A Genetic Atlas of Human Admixture History

(2014) G. Hellenthal et al.   SCIENCE

4P: fast computing of population genetics statistics from large DNA polymorphism panels

(2014) Andrea Benazzo et al.   Ecology and Evolution

RFMix: A Discriminative Modeling Approach for Rapid and Robust Local-Ancestry Inference

(2013) Brian K. Maples et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Whole-Genome Sequencing Uncovers the Genetic Basis of Chronic Mountain Sickness in Andean Highlanders

(2013) Dan Zhou et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Roles of DUOX-Mediated Hydrogen Peroxide in Metabolism, Host Defense, and Signaling

(2013) Xavier De Deken et al.   ANTIOXIDANTS & REDOX SIGNALING

Improving the Accuracy and Efficiency of Identity-by-Descent Detection in Population Data

(2013) B. L. Browning et al.   GENETICS

The Genetic History of Indigenous Populations of the Peruvian and Bolivian Altiplano: The Legacy of the Uros

(2013) José Raul Sandoval et al.   PLoS One

A unique secreted adenovirus E3 protein binds to the leukocyte common antigen CD45 and modulates leukocyte functions

(2013) M. Windheim et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome-Wide Mouse Mutagenesis Reveals CD45-Mediated T Cell Function as Critical in Protective Immunity to HSV-1

(2013) Grégory Caignard et al.   PLoS Pathogens

Length Distributions of Identity by Descent Reveal Fine-Scale Demographic History

(2012) Pier Francesco Palamara et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Ancient Admixture in Human History

(2012) N. Patterson et al.   GENETICS

Reconstructing Native American population history

(2012) David Reich et al.   NATURE

An integrated map of genetic variation from 1,092 human genomes

(2012)   NATURE

Inference of Population Structure using Dense Haplotype Data

(2012) Daniel John Lawson et al.   PLoS Genetics

A linear complexity phasing method for thousands of genomes

(2011) Olivier Delaneau et al.   NATURE METHODS

Sequencing of 50 Human Exomes Reveals Adaptation to High Altitude

(2010) X. Yi et al.   SCIENCE

A Draft Sequence of the Neandertal Genome

(2010) R. E. Green et al.   SCIENCE

Fast model-based estimation of ancestry in unrelated individuals

(2009) D. H. Alexander et al.   GENOME RESEARCH

Native South American Genetic Structure and Prehistory Inferred from Hierarchical Modeling of mtDNA

(2008) C. M. Lewis et al.   MOLECULAR BIOLOGY AND EVOLUTION

Monte Verde: Seaweed, Food, Medicine, and the Peopling of South America

(2008) T. D. Dillehay et al.   SCIENCE