Effects of cell cycle variability on lineage and population measurements of messenger RNA abundance

Models of protein production along the cell cycle: An investigation of possible sources of noise

(2020) Renaud Dessalles et al.   PLoS One

Analytical distributions for detailed models of stochastic gene expression in eukaryotic cells

(2020) Zhixing Cao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Sequencing metabolically labeled transcripts in single cells reveals mRNA turnover strategies

(2020) Nico Battich et al.   SCIENCE

Extrinsic Noise and Heavy-Tailed Laws in Gene Expression

(2020) Lucy Ham et al.   PHYSICAL REVIEW LETTERS

Live cell imaging of single RNA molecules with fluorogenic Mango II arrays

(2020) Adam D. Cawte et al.   Nature Communications

Dynamics of DNA replication in a eukaryotic cell

(2019) Thomas Kelly et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Simulation and inference algorithms for stochastic biochemical reaction networks: from basic concepts to state-of-the-art

(2019) David J. Warne et al.   Journal of the Royal Society Interface

Mathematical models incorporating a multi-stage cell cycle replicate normally-hidden inherent synchronization in cell proliferation

(2019) Sean T. Vittadello et al.   Journal of the Royal Society Interface

Visualizing RNA dynamics in live cells with bright and stable fluorescent RNAs

(2019) Xianjun Chen et al.   NATURE BIOTECHNOLOGY

Multimodal transcriptional control of pattern formation in embryonic development

(2019) Nicholas C. Lammers et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Diverse Spatial Expression Patterns Emerge from Unified Kinetics of Transcriptional Bursting

(2018) Benjamin Zoller et al.   CELL

Cell size control driven by the circadian clock and environment in cyanobacteria

(2018) Bruno M. C. Martins et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Making sense of snapshot data: ergodic principle for clonal cell populations

(2017) Philipp Thomas   Journal of the Royal Society Interface

An improved MS2 system for accurate reporting of the mRNA life cycle

(2017) Evelina Tutucci et al.   NATURE METHODS

Intercellular Variability in Protein Levels from Stochastic Expression and Noisy Cell Cycle Processes

(2016) Mohammad Soltani et al.   PLoS Computational Biology

Single-cell analysis of transcription kinetics across the cell cycle

(2016) Samuel O Skinner et al.   eLife

Effects of cell-cycle-dependent expression on random fluctuations in protein levels

(2016) Mohammad Soltani et al.   Royal Society Open Science

Single-cell protein dynamics reproduce universal fluctuations in cell populations

(2015) Naama Brenner et al.   EUROPEAN PHYSICAL JOURNAL E

Single Mammalian Cells Compensate for Differences in Cellular Volume and DNA Copy Number through Independent Global Transcriptional Mechanisms

(2015) Olivia Padovan-Merhar et al.   MOLECULAR CELL

Closed-form stochastic solutions for non-equilibrium dynamics and inheritance of cellular components over many cell divisions

(2015) Iain G. Johnston et al.   PROCEEDINGS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES

Contributions of Cell Growth and Biochemical Reactions to Nongenetic Variability of Cells

(2014) Anne Schwabe et al.   BIOPHYSICAL JOURNAL

Promoter-mediated Transcriptional Dynamics

(2014) Jiajun Zhang et al.   BIOPHYSICAL JOURNAL

Growth, homeostatic regulation and stem cell dynamics in tissues

(2014) E. Hannezo et al.   Journal of the Royal Society Interface

Stretched cell cycle model for proliferating lymphocytes

(2014) M. R. Dowling et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Fractional proliferation: a method to deconvolve cell population dynamics from single-cell data

(2012) Darren R Tyson et al.   NATURE METHODS

Activation-Induced B Cell Fates Are Selected by Intracellular Stochastic Competition

(2012) K. R. Duffy et al.   SCIENCE

Quantitative analysis of cell cycle phase durations and PC12 differentiation using fluorescent biosensors

(2011) Angela T. Hahn et al.   CELL CYCLE

What's all the noise about developmental stochasticity?

(2011) A. C. Oates   DEVELOPMENT

Global quantification of mammalian gene expression control

(2011) Björn Schwanhäusser et al.   NATURE

General properties of transcriptional time series in Escherichia coli

(2011) Lok-hang So et al.   NATURE GENETICS

Random partitioning of molecules at cell division

(2011) D. Huh et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mammalian Genes Are Transcribed with Widely Different Bursting Kinetics

(2011) D. M. Suter et al.   SCIENCE

MRC1-dependent scaling of the budding yeast DNA replication timing program

(2010) A. Koren et al.   GENOME RESEARCH

Expression of human eukaryotic initiation factor 3f oscillates with cell cycle in A549 cells and is essential for cell viability

(2010) Ana E Higareda-Mendoza et al.   Cell Division

Single-RNA counting reveals alternative modes of gene expression in yeast

(2008) Daniel Zenklusen et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY