Intercellular Variability in Protein Levels from Stochastic Expression and Noisy Cell Cycle Processes
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Title
Intercellular Variability in Protein Levels from Stochastic Expression and Noisy Cell Cycle Processes
Authors
Keywords
Cell cycle and cell division, Gene expression, Gene duplication, Probability distribution, Random variables, Binomials, DNA transcription, Skewness
Journal
PLoS Computational Biology
Volume 12, Issue 8, Pages e1004972
Publisher
Public Library of Science (PLoS)
Online
2016-08-19
DOI
10.1371/journal.pcbi.1004972
References
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Related references
Note: Only part of the references are listed.- Generation and filtering of gene expression noise by the bacterial cell cycle
- (2016) Noreen Walker et al. BMC BIOLOGY
- Noise and Epigenetic Inheritance of Single-Cell Division Times Influence Population Fitness
- (2016) Bram Cerulus et al. CURRENT BIOLOGY
- A mechanistic stochastic framework for regulating bacterial cell division
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- (2015) Bernie J. Daigle et al. BIOINFORMATICS
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- Cell-Size Control and Homeostasis in Bacteria
- (2015) Sattar Taheri-Araghi et al. CURRENT BIOLOGY
- Noise in gene expression is coupled to growth rate
- (2015) Leeat Keren et al. GENOME RESEARCH
- Conditional Moment Closure Schemes for Studying Stochastic Dynamics of Genetic Circuits
- (2015) Mohammad Soltani et al. IEEE Transactions on Biomedical Circuits and Systems
- Division time-based amplifiers for stochastic gene expression
- (2015) Haohua Wang et al. Molecular BioSystems
- Single Mammalian Cells Compensate for Differences in Cellular Volume and DNA Copy Number through Independent Global Transcriptional Mechanisms
- (2015) Olivia Padovan-Merhar et al. MOLECULAR CELL
- Stochasticity and homeostasis in the E. coli replication and division cycle
- (2015) Aileen Adiciptaningrum et al. Scientific Reports
- Quantifying Selective Pressures Driving Bacterial Evolution Using Lineage Analysis
- (2015) Guillaume Lambert et al. Physical Review X
- Transcriptional Bursting in Gene Expression: Analytical Results for General Stochastic Models
- (2015) Niraj Kumar et al. PLoS Computational Biology
- Transient Changes in Intercellular Protein Variability Identify Sources of Noise in Gene Expression
- (2014) Abhyudai Singh BIOPHYSICAL JOURNAL
- Contributions of Cell Growth and Biochemical Reactions to Nongenetic Variability of Cells
- (2014) Anne Schwabe et al. BIOPHYSICAL JOURNAL
- Division in Escherichia coli is triggered by a size-sensing rather than a timing mechanism
- (2014) Lydia Robert et al. BMC BIOLOGY
- Mechanism of Transcriptional Bursting in Bacteria
- (2014) Shasha Chong et al. CELL
- A Constant Size Extension Drives Bacterial Cell Size Homeostasis
- (2014) Manuel Campos et al. CELL
- Regulation of Transcriptional Bursting by a Naturally Oscillating Signal
- (2014) Adam M. Corrigan et al. CURRENT BIOLOGY
- Quantifying gene expression variability arising from randomness in cell division times
- (2014) Duarte Antunes et al. JOURNAL OF MATHEMATICAL BIOLOGY
- Dynamics of small genetic circuits subject to stochastic partitioning in cell division
- (2014) Jason Lloyd-Price et al. JOURNAL OF THEORETICAL BIOLOGY
- Cell Size Regulation in Bacteria
- (2014) Ariel Amir PHYSICAL REVIEW LETTERS
- Quantifying Intrinsic and Extrinsic Variability in Stochastic Gene Expression Models
- (2014) Abhyudai Singh et al. PLoS One
- Concerted control ofEscherichia colicell division
- (2014) Matteo Osella et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Dynamic regulation of eve stripe 2 expression reveals transcriptional bursts in living Drosophila embryos
- (2014) J. P. Bothma et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
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- (2014) R. D. Dar et al. SCIENCE
- A Computational Framework for Analyzing Stochasticity in Gene Expression
- (2014) Marc S. Sherman et al. PLoS Computational Biology
- Modeling the effect of cell division on genetic oscillators
- (2013) Didier Gonze JOURNAL OF THEORETICAL BIOLOGY
- Dynamics extracted from fixed cells reveal feedback linking cell growth to cell cycle
- (2013) Ran Kafri et al. NATURE
- Contribution of phenotypic heterogeneity to adaptive antibiotic resistance
- (2013) M. A. Sanchez-Romero et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Systematic Identification of Signal-Activated Stochastic Gene Regulation
- (2013) G. Neuert et al. SCIENCE
- Stochastic gene expression in mammals: lessons from olfaction
- (2013) Angeliki Magklara et al. TRENDS IN CELL BIOLOGY
- Linking Stochastic Fluctuations in Chromatin Structure and Gene Expression
- (2013) Christopher R. Brown et al. PLOS BIOLOGY
- Cell-Cycle Dependence of Transcription Dominates Noise in Gene Expression
- (2013) C. J. Zopf et al. PLoS Computational Biology
- Noise-mean relationship in mutated promoters
- (2012) G. Hornung et al. GENOME RESEARCH
- Dynamics of protein noise can distinguish between alternate sources of gene-expression variability
- (2012) Abhyudai Singh et al. Molecular Systems Biology
- Transcriptional burst frequency and burst size are equally modulated across the human genome
- (2012) R. D. Dar et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Global quantification of mammalian gene expression control
- (2011) Björn Schwanhäusser et al. NATURE
- Intrinsic Noise in Stochastic Models of Gene Expression with Molecular Memory and Bursting
- (2011) Tao Jia et al. PHYSICAL REVIEW LETTERS
- Separating intrinsic from extrinsic fluctuations in dynamic biological systems
- (2011) A. Hilfinger et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Random partitioning of molecules at cell division
- (2011) D. Huh et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Mammalian Genes Are Transcribed with Widely Different Bursting Kinetics
- (2011) D. M. Suter et al. SCIENCE
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- (2011) Susan E. Lott et al. PLOS BIOLOGY
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- (2010) Abhyudai Singh et al. BIOPHYSICAL JOURNAL
- Robust Growth of Escherichia coli
- (2010) Ping Wang et al. CURRENT BIOLOGY
- Approximate Moment Dynamics for Chemically Reacting Systems
- (2010) Abhyudai Singh et al. IEEE TRANSACTIONS ON AUTOMATIC CONTROL
- Functional roles for noise in genetic circuits
- (2010) Avigdor Eldar et al. NATURE
- Non-genetic heterogeneity from stochastic partitioning at cell division
- (2010) Dann Huh et al. NATURE GENETICS
- Single-allele analysis of transcription kinetics in living mammalian cells
- (2010) Sharon Yunger et al. NATURE METHODS
- Stochastic hybrid systems for studying biochemical processes
- (2010) A. Singh et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES
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- (2010) Anton Zilman et al. PLoS One
- Quantifying E. coli Proteome and Transcriptome with Single-Molecule Sensitivity in Single Cells
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- Moment-closure approximations for mass-action models
- (2009) C.S. Gillespie IET Systems Biology
- A moment closure method for stochastic reaction networks
- (2009) Chang Hyeong Lee et al. JOURNAL OF CHEMICAL PHYSICS
- Listening to the noise: random fluctuations reveal gene network parameters
- (2009) Brian Munsky et al. Molecular Systems Biology
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- (2009) E. D. Hawkins et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Bistability, Epigenetics, and Bet-Hedging in Bacteria
- (2008) Jan-Willem Veening et al. Annual Review of Microbiology
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- Nature, Nurture, or Chance: Stochastic Gene Expression and Its Consequences
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- (2008) Leor S Weinberger et al. NATURE GENETICS
- Analytical distributions for stochastic gene expression
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- Stochasticity and Cell Fate
- (2008) R. Losick et al. SCIENCE
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- (2007) Galina Reshes et al. BIOPHYSICAL JOURNAL
- Epigenetic gene expression noise and phenotypic diversification of clonal cell populations
- (2007) Thi My Anh Neildez-Nguyen et al. DIFFERENTIATION
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