Structural and Functional Changes in Prokaryotic Communities in Artificial Pit Mud during Chinese Baijiu Production

Contrasting bacterial community structure in artificial pit mud-starter cultures of different qualities: a complex biological mixture for Chinese strong-flavor Baijiu production

(2019) Mao-Ke Liu et al.   3 Biotech

Profiling the Clostridia with butyrate-producing potential in the mud of Chinese liquor fermentation cellar

(2019) Li-Juan Chai et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Consistent and correctable bias in metagenomic sequencing experiments

(2019) Michael R McLaren et al.   eLife

Succession of the functional microbial communities and the metabolic functions in maize straw composting process

(2018) Huawei Wei et al.   BIORESOURCE TECHNOLOGY

Diversity and Function of Microbial Community in Chinese Strong-Flavor Baijiu Ecosystem: A Review

(2018) Wei Zou et al.   Frontiers in Microbiology

OUP accepted manuscript

(2018)   NUCLEIC ACIDS RESEARCH

Deep sequencing reveals high bacterial diversity and phylogenetic novelty in pit mud from Luzhou Laojiao cellars for Chinese strong-flavor Baijiu

(2017) Mao-Ke Liu et al.   FOOD RESEARCH INTERNATIONAL

Source tracking of prokaryotic communities in fermented grain of Chinese strong-flavor liquor

(2017) Xueshan Wang et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Proteomic Investigation of Metabolic Changes of Mushroom (Flammulina velutipes) Packaged with Nanocomposite Material during Cold Storage

(2017) Donglu Fang et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Simultaneous Determination of Volatile Organic Compounds in Commercial Alcoholic Beverages by Gas Chromatography with Flame Ionization Detection

(2017) Hyung Min Kim et al.   JOURNAL OF AOAC INTERNATIONAL

Use of microbial indicators combined with environmental factors coupled with metrology tools for discrimination and classification of Luzhou -flavoured pit muds

(2017) Q.Y. Zhang et al.   JOURNAL OF APPLIED MICROBIOLOGY

Challenges and perspectives of metaproteomic data analysis

(2017) Robert Heyer et al.   JOURNAL OF BIOTECHNOLOGY

HMDB 4.0: the human metabolome database for 2018

(2017) David S Wishart et al.   NUCLEIC ACIDS RESEARCH

Prokaryotic diversity and biochemical properties in aging artificial pit mud used for the production of Chinese strong flavor liquor

(2017) Zhongke Sun et al.   3 Biotech

Prokaryotic diversity and biochemical properties in aging artificial pit mud used for the production of Chinese strong flavor liquor

(2017) Zhongke Sun et al.   3 Biotech

The functional potential and active populations of the pit mud microbiome for the production of Chinese strong-flavour liquor

(2017) Yong Tao et al.   Microbial Biotechnology

Elucidation of complexity and prediction of interactions in microbial communities

(2017) Cristal Zuñiga et al.   Microbial Biotechnology

Illuminating Anaerobic Microbial Community and Cooccurrence Patterns across a Quality Gradient in Chinese Liquor Fermentation Pit Muds

(2016) Xiaolong Hu et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Molecular microbiology methods for environmental diagnosis

(2016) T. Bouchez et al.   Environmental Chemistry Letters

Haloimpatiens lingqiaonensis gen. nov., sp. nov., an anaerobic bacterium isolated from paper-mill wastewater

(2016) Dildar. Wu et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

MBROLE 2.0—functional enrichment of chemical compounds

(2016) Javier López-Ibáñez et al.   NUCLEIC ACIDS RESEARCH

Soil metaproteomics reveals an inter-kingdom stress response to the presence of black truffles

(2016) Elisa Zampieri et al.   Scientific Reports

A Metaproteomic Analysis of the Response of a Freshwater Microbial Community under Nutrient Enrichment

(2016) David A. Russo et al.   Frontiers in Microbiology

Environmental Factors Affecting Microbiota Dynamics during Traditional Solid-state Fermentation of Chinese Daqu Starter

(2016) Pan Li et al.   Frontiers in Microbiology

Positive selection on D-lactate dehydrogenases of Lactobacillus delbrueckii subspecies bulgaricus

(2015) Jifeng Zhang et al.   IET Systems Biology

Identification and quantification of the caproic acid-producing bacterium Clostridium kluyveri in the fermentation of pit mud used for Chinese strong-aroma type liquor production

(2015) Xiao-long Hu et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Difference of microbial community stressed in artificial pit muds forLuzhou-flavour liquor brewing revealed by multiphase culture-independent technology

(2015) L. Zhang et al.   JOURNAL OF APPLIED MICROBIOLOGY

Chemical Analysis of the Chinese Liquor Luzhoulaojiao by Comprehensive Two-Dimensional Gas Chromatography/Time-of-Flight Mass Spectrometry

(2015) Feng Yao et al.   Scientific Reports

The genus Weissella: taxonomy, ecology and biotechnological potential

(2015) Vincenzina Fusco et al.   Frontiers in Microbiology

Prokaryotic Communities in Pit Mud from Different-Aged Cellars Used for the Production of Chinese Strong-Flavored Liquor

(2014) Yong Tao et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

STAMP: statistical analysis of taxonomic and functional profiles

(2014) Donovan H. Parks et al.   BIOINFORMATICS

Development, validation and application of specific primers for analyzing the clostridial diversity in dark fermentation pit mud by PCR-DGGE

(2014) Xiao-Long Hu et al.   BIORESOURCE TECHNOLOGY

Long-term batch brewing accumulates adaptive microbes, which comprehensively produce more flavorful Chinese liquors

(2014) Chuan-dong Wang et al.   FOOD RESEARCH INTERNATIONAL

Eubacterial and archaeal community characteristics in the man-made pit mud revealed by combined PCR-DGGE and FISH analyses

(2014) Xiaofei Ding et al.   FOOD RESEARCH INTERNATIONAL

Discrimination of different kinds of Luzhou-flavor raw liquors based on their volatile features

(2013) Jia Zheng et al.   FOOD RESEARCH INTERNATIONAL

Rummeliibacillus suwonensis sp. nov., isolated from soil collected in a mountain area of South Korea

(2013) Jihee Her et al.   JOURNAL OF MICROBIOLOGY

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

(2013) Morgan G I Langille et al.   NATURE BIOTECHNOLOGY

A two-step database search method improves sensitivity in peptide sequence matches for metaproteomics and proteogenomics studies

(2013) Pratik Jagtap et al.   PROTEOMICS

Interspecies distances between propionic acid degraders and methanogens in syntrophic consortia for optimal hydrogen transfer

(2012) Monika Felchner-Zwirello et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Fonticella tunisiensis gen. nov., sp. nov., isolated from a hot spring

(2012) B. Fraj et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Daqu- A Traditional Chinese Liquor Fermentation Starter

(2012) Xiao-Wei Zheng et al.   JOURNAL OF THE INSTITUTE OF BREWING

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Monitoring the microbial community during solid-state acetic acid fermentation of Zhenjiang aromatic vinegar

(2011) Wei Xu et al.   FOOD MICROBIOLOGY

Skyline: an open source document editor for creating and analyzing targeted proteomics experiments

(2010) Brendan MacLean et al.   BIOINFORMATICS

Characterization of Metaproteomics in Crop Rhizospheric Soil

(2010) Hai-Bin Wang et al.   JOURNAL OF PROTEOME RESEARCH

FiehnLib: Mass Spectral and Retention Index Libraries for Metabolomics Based on Quadrupole and Time-of-Flight Gas Chromatography/Mass Spectrometry

(2009) Tobias Kind et al.   ANALYTICAL CHEMISTRY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Shotgun metaproteomics of the human distal gut microbiota

(2008) Nathan C Verberkmoes et al.   ISME Journal