Examining Escherichia coli glycolytic pathways, catabolite repression, and metabolite channeling using Δpfk mutants

Elucidation of the co-metabolism of glycerol and glucose in Escherichia coli by genetic engineering, transcription profiling, and 13C metabolic flux analysis

(2016) Ruilian Yao et al.   Biotechnology for Biofuels

Co-production of hydrogen and ethanol from glucose by modification of glycolytic pathways inEscherichia coli- from Embden-Meyerhof-Parnas pathway to pentose phosphate pathway

(2016) Eunhee Seol et al.   Biotechnology Journal

Single point mutation in adeno-associated viral vectors -DJ capsid leads to improvement for gene delivery in vivo

(2016) Yingying Mao et al.   BMC BIOTECHNOLOGY

Characterization of physiological responses to 22 gene knockouts in Escherichia coli central carbon metabolism

(2016) Christopher P. Long et al.   METABOLIC ENGINEERING

ATP citrate lyase mediated cytosolic acetyl-CoA biosynthesis increases mevalonate production in Saccharomyces cerevisiae

(2016) Sarah Rodriguez et al.   Microbial Cell Factories

Substrate channelling as an approach to cascade reactions

(2016) Ian Wheeldon et al.   Nature Chemistry

Co-production of hydrogen and ethanol from glucose by modification of glycolytic pathways inEscherichia coli- from Embden-Meyerhof-Parnas pathway to pentose phosphate pathway

(2016) Eunhee Seol et al.   Biotechnology Journal

Large-Scale13C Flux Profiling Reveals Conservation of the Entner-Doudoroff Pathway as a Glycolytic Strategy among Marine Bacteria That Use Glucose

(2015) Arne Klingner et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Metabolic flux analysis of Escherichia coli MG1655 under octanoic acid (C8) stress

(2015) Yanfen Fu et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Simultaneous conversion of glucose and xylose to 3-hydroxypropionic acid in engineered Escherichia coli by modulation of sugar transport and glycerol synthesis

(2015) In-Young Jung et al.   BIORESOURCE TECHNOLOGY

Rapid metabolic analysis of Rhodococcus opacus PD630 via parallel 13 C-metabolite fingerprinting

(2015) Whitney D. Hollinshead et al.   BIOTECHNOLOGY AND BIOENGINEERING

Rethinking the Hierarchy of Sugar Utilization in Bacteria

(2015) Chase L. Beisel et al.   JOURNAL OF BACTERIOLOGY

Reciprocal Regulation of l-Arabinose and d-Xylose Metabolism in Escherichia coli

(2015) Santosh Koirala et al.   JOURNAL OF BACTERIOLOGY

Efficient production of xylitol from hemicellulosic hydrolysate using engineered Escherichia coli

(2015) Buli Su et al.   METABOLIC ENGINEERING

Rational design of a synthetic Entner–Doudoroff pathway for improved and controllable NADPH regeneration

(2015) Chiam Yu Ng et al.   METABOLIC ENGINEERING

Sampling of intracellular metabolites for stationary and non-stationary 13C metabolic flux analysis in Escherichia coli

(2014) Pierre Millard et al.   ANALYTICAL BIOCHEMISTRY

Fatty acid synthesis in Escherichia coli and its applications towards the production of fatty acid based biofuels

(2014) Helge Janßen et al.   Biotechnology for Biofuels

Metabolic engineering of Escherichia coli strains for co-production of hydrogen and ethanol from glucose

(2014) Eunhee Seol et al.   INTERNATIONAL JOURNAL OF HYDROGEN ENERGY

Isolation of a novel alkaline-stable lipase from a metagenomic library and its specific application for milkfat flavor production

(2014) Qing Peng et al.   Microbial Cell Factories

Microbial Synthesis of Pinene

(2014) Stephen Sarria et al.   ACS Synthetic Biology

Pathway Thermodynamics Highlights Kinetic Obstacles in Central Metabolism

(2014) Elad Noor et al.   PLoS Computational Biology

Engineering Escherichia coli to convert acetic acid to free fatty acids

(2013) Yi Xiao et al.   BIOCHEMICAL ENGINEERING JOURNAL

Central metabolic responses to the overproduction of fatty acids inEscherichia colibased on13C-metabolic flux analysis

(2013) Lian He et al.   BIOTECHNOLOGY AND BIOENGINEERING

Systematic Approach To Engineer Escherichia coli Pathways for Co-utilization of a Glucose–Xylose Mixture

(2013) Chung-Jen Chiang et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Systematic identification of allosteric protein-metabolite interactions that control enzyme activity in vivo

(2013) Hannes Link et al.   NATURE BIOTECHNOLOGY

Glycolytic strategy as a tradeoff between energy yield and protein cost

(2013) A. Flamholz et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Entner-Doudoroff pathway empowersPseudomonas putida KT2440 with a high tolerance to oxidative stress

(2012) Max Chavarría et al.   ENVIRONMENTAL MICROBIOLOGY

Design, implementation and practice of JBEI-ICE: an open source biological part registry platform and tools

(2012) T. S. Ham et al.   NUCLEIC ACIDS RESEARCH

Substrate channeling and enzyme complexes for biotechnological applications

(2011) Y.-H. Percival Zhang   BIOTECHNOLOGY ADVANCES

A comprehensive genome-scale reconstruction of Escherichia coli metabolism--2011

(2011) J. D. Orth et al.   Molecular Systems Biology

Capturing Metabolite Channeling in Metabolic Flux Phenotypes

(2011) T. C. R. Williams et al.   PLANT PHYSIOLOGY

BglBrick vectors and datasheets: A synthetic biology platform for gene expression

(2011) Taek Lee et al.   Journal of Biological Engineering

Simultaneous consumption of pentose and hexose sugars: an optimal microbial phenotype for efficient fermentation of lignocellulosic biomass

(2010) Jae-Han Kim et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Absolute quantitation of intracellular metabolite concentrations by an isotope ratio-based approach

(2008) Bryson D Bennett et al.   Nature Protocols

Carbon catabolite repression in bacteria: many ways to make the most out of nutrients

(2008) Boris Görke et al.   NATURE REVIEWS MICROBIOLOGY