Pathway Thermodynamics Highlights Kinetic Obstacles in Central Metabolism
Published 2014 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Pathway Thermodynamics Highlights Kinetic Obstacles in Central Metabolism
Authors
Keywords
-
Journal
PLoS Computational Biology
Volume 10, Issue 2, Pages e1003483
Publisher
Public Library of Science (PLoS)
Online
2014-02-21
DOI
10.1371/journal.pcbi.1003483
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- A note on the kinetics of enzyme action: A decomposition that highlights thermodynamic effects
- (2013) Elad Noor et al. FEBS LETTERS
- A Bacterial Glucanotransferase Can Replace the Complex Maltose Metabolism Required for Starch to Sucrose Conversion in Leaves at Night
- (2013) Christian Ruzanski et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Temporal system-level organization of the switch from glycolytic to gluconeogenic operation in yeast
- (2013) G. G. Zampar et al. Molecular Systems Biology
- Synthetic non-oxidative glycolysis enables complete carbon conservation
- (2013) Igor W. Bogorad et al. NATURE
- Systematic identification of allosteric protein-metabolite interactions that control enzyme activity in vivo
- (2013) Hannes Link et al. NATURE BIOTECHNOLOGY
- Glycolytic strategy as a tradeoff between energy yield and protein cost
- (2013) A. Flamholz et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Consistent Estimation of Gibbs Energy Using Component Contributions
- (2013) Elad Noor et al. PLoS Computational Biology
- Thermodynamic constraints shape the structure of carbon fixation pathways
- (2012) Arren Bar-Even et al. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
- Does acetogenesis really require especially low reduction potential?
- (2012) Arren Bar-Even BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
- Design and analysis of metabolic pathways supporting formatotrophic growth for electricity-dependent cultivation of microbes
- (2012) Arren Bar-Even et al. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
- An integrated open framework for thermodynamics of reactions that combines accuracy and coverage
- (2012) Elad Noor et al. BIOINFORMATICS
- Rethinking glycolysis: on the biochemical logic of metabolic pathways
- (2012) Arren Bar-Even et al. Nature Chemical Biology
- Efficiency in Evolutionary Trade-Offs
- (2012) E. Noor et al. SCIENCE
- Multidimensional Optimality of Microbial Metabolism
- (2012) R. Schuetz et al. SCIENCE
- Impact of Stoichiometry Representation on Simulation of Genotype-Phenotype Relationships in Metabolic Networks
- (2012) Ana Rita Brochado et al. PLoS Computational Biology
- The Moderately Efficient Enzyme: Evolutionary and Physicochemical Trends Shaping Enzyme Parameters
- (2011) Arren Bar-Even et al. BIOCHEMISTRY
- Enhancement of the Rate of Pyrophosphate Hydrolysis by Nonenzymatic Catalysts and by Inorganic Pyrophosphatase
- (2011) Randy B. Stockbridge et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- A survey of carbon fixation pathways through a quantitative lens
- (2011) Arren Bar-Even et al. JOURNAL OF EXPERIMENTAL BOTANY
- Carbohydrate-active enzymes exemplify entropic principles in metabolism
- (2011) O. Kartal et al. Molecular Systems Biology
- Open Babel: An open chemical toolbox
- (2011) Noel M O'Boyle et al. Journal of Cheminformatics
- Hydrophobicity and Charge Shape Cellular Metabolite Concentrations
- (2011) Arren Bar-Even et al. PLoS Computational Biology
- Synergy between 13C-metabolic flux analysis and flux balance analysis for understanding metabolic adaption to anaerobiosis in E. coli
- (2010) Xuewen Chen et al. METABOLIC ENGINEERING
- Central Carbon Metabolism as a Minimal Biochemical Walk between Precursors for Biomass and Energy
- (2010) Elad Noor et al. MOLECULAR CELL
- Design and analysis of synthetic carbon fixation pathways
- (2010) A. Bar-Even et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Production of biofuels and biochemicals: in need of an ORACLE
- (2010) Ljubisa Miskovic et al. TRENDS IN BIOTECHNOLOGY
- Not just a circle: flux modes in the plant TCA cycle
- (2010) Lee J. Sweetlove et al. TRENDS IN PLANT SCIENCE
- Thermodynamic analysis of biodegradation pathways
- (2009) Stacey D. Finley et al. BIOTECHNOLOGY AND BIOENGINEERING
- Influence of uncertainties in pH, pMg, activity coefficients, metabolite concentrations, and other factors on the analysis of the thermodynamic feasibility of metabolic pathways
- (2009) Vojislav Vojinović et al. BIOTECHNOLOGY AND BIOENGINEERING
- Shifts in growth strategies reflect tradeoffs in cellular economics
- (2009) Douwe Molenaar et al. Molecular Systems Biology
- Absolute metabolite concentrations and implied enzyme active site occupancy in Escherichia coli
- (2009) Bryson D Bennett et al. Nature Chemical Biology
- An ATP and Oxalate Generating Variant Tricarboxylic Acid Cycle Counters Aluminum Toxicity in Pseudomonas fluorescens
- (2009) Ranji Singh et al. PLoS One
- BIOCHEMISTRY: How Enzymes Work
- (2008) D. Ringe et al. SCIENCE
- Is maximization of molar yield in metabolic networks favoured by evolution?
- (2007) Stefan Schuster et al. JOURNAL OF THEORETICAL BIOLOGY
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now