DNA metabarcoding reveals modern and past eukaryotic communities in a high-mountain peat bog system

Comprehensive biodiversity analysis via ultra-deep patterned flow cell technology: a case study of eDNA metabarcoding seawater

(2019) G. A. C. Singer et al.   Scientific Reports

Under the canopy: Community-wide effects of invasive algae in Marine Protected Areas revealed by metabarcoding

(2018) Owen S. Wangensteen et al.   MARINE POLLUTION BULLETIN

Plant DNA metabarcoding of lake sediments: How does it represent the contemporary vegetation

(2018) Inger Greve Alsos et al.   PLoS One

DNA metabarcoding of littoral hard-bottom communities: high diversity and database gaps revealed by two molecular markers

(2018) Owen S. Wangensteen et al.   PeerJ

DNA metabarcoding unveils multiscale trophic variation in a widespread coastal opportunist

(2018) Andjin Siegenthaler et al.   MOLECULAR ECOLOGY

Tracking a century of changes in microbial eukaryotic diversity in lakes driven by nutrient enrichment and climate warming

(2017) Eric Capo et al.   ENVIRONMENTAL MICROBIOLOGY

Vertical distribution of fungi in hollows and hummocks of boreal peatlands

(2017) Asma Asemaninejad et al.   Fungal Ecology

DNA-based methods in paleolimnology: new opportunities for investigating long-term dynamics of lacustrine biodiversity

(2017) Isabelle Domaizon et al.   JOURNAL OF PALEOLIMNOLOGY

Ancient plant DNA in lake sediments

(2017) Laura Parducci et al.   NEW PHYTOLOGIST

Environmental history and vegetation dynamics in response to climate variations and human pressure during the Holocene in Bassa Nera, Central Pyrenees

(2017) Sandra Garcés-Pastor et al.   PALAEOGEOGRAPHY PALAEOCLIMATOLOGY PALAEOECOLOGY

High-throughput sequencing reveals diverse oomycete communities in oligotrophic peat bog micro-habitat

(2016) David Singer et al.   Fungal Ecology

Vegetation shifts, human impact and peat bog development in Bassa Nera pond (Central Pyrenees) during the last millennium

(2016) Sandra Garcés-Pastor et al.   HOLOCENE

Local diversity of heathland Cercozoa explored by in-depth sequencing

(2016) Christoffer Bugge Harder et al.   ISME Journal

Long-term dynamics in microbial eukaryotes communities: a palaeolimnological view based on sedimentary DNA

(2016) Eric Capo et al.   MOLECULAR ECOLOGY

Spatio-temporal monitoring of deep-sea communities using metabarcoding of sediment DNA and RNA

(2016) Magdalena Guardiola et al.   PeerJ

Performance of cytochrome c oxidase subunit I (COI), ribosomal DNA Large Subunit (LSU) and Internal Transcribed Spacer 2 (ITS2) in DNA barcoding of Collembola

(2015) Sten Anslan et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

Origin, dynamics, and implications of extracellular DNA pools in marine sediments

(2015) Andrea Torti et al.   Marine Genomics

Is Planktonic Diversity Well Recorded in Sedimentary DNA? Toward the Reconstruction of Past Protistan Diversity

(2015) Eric Capo et al.   MICROBIAL ECOLOGY

Reconstructing long-term human impacts on plant communities: an ecological approach based on lake sediment DNA

(2015) Johan Pansu et al.   MOLECULAR ECOLOGY

obitools: aunix-inspired software package for DNA metabarcoding

(2015) Frédéric Boyer et al.   Molecular Ecology Resources

Deep-Sea, Deep-Sequencing: Metabarcoding Extracellular DNA from Sediments of Marine Canyons

(2015) Magdalena Guardiola et al.   PLoS One

Forensic soil DNA analysis using high-throughput sequencing: A comparison of four molecular markers

(2014) Jennifer M. Young et al.   Forensic Science International-Genetics

A PLEA FOR DNA BARCODING OF FORAMINIFERA

(2014) J. Pawlowski et al.   JOURNAL OF FORAMINIFERAL RESEARCH

Environmental monitoring through protist next-generation sequencing metabarcoding: assessing the impact of fish farming on benthic foraminifera communities

(2014) Jan Pawlowski et al.   Molecular Ecology Resources

Proxy comparison in ancient peat sediments: pollen, macrofossil and plant DNA

(2014) L. Parducci et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Ancient DNA complements microfossil record in deep-sea subsurface sediments

(2013) F. Lejzerowicz et al.   Biology Letters

Redesign of PCR primers for mitochondrial cytochromecoxidase subunit I for marine invertebrates and application in all-taxa biotic surveys

(2013) J. Geller et al.   Molecular Ecology Resources

A comparative study of ancient environmental DNA to pollen and macrofossils from lake sediments reveals taxonomic overlap and additional plant taxa

(2013) Mikkel Winther Pedersen et al.   QUATERNARY SCIENCE REVIEWS

Identifying active foraminifera in the Sea of Japan using metatranscriptomic approach

(2012) Franck Lejzerowicz et al.   DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY

Fungal palaeodiversity revealed using high-throughput metabarcoding of ancient DNA from arctic permafrost

(2012) Eva Bellemain et al.   ENVIRONMENTAL MICROBIOLOGY

New environmental metabarcodes for analysing soil DNA: potential for studying past and present ecosystems

(2012) LAURA S. EPP et al.   MOLECULAR ECOLOGY

Towards next-generation biodiversity assessment using DNA metabarcoding

(2012) PIERRE TABERLET et al.   MOLECULAR ECOLOGY

Microbial communities in natural and disturbed peatlands: A review

(2012) R. Andersen et al.   SOIL BIOLOGY & BIOCHEMISTRY

Ancient DNA from lake sediments: Bridging the gap between paleoecology and genetics

(2011) Lynn L Anderson-Carpenter et al.   BMC EVOLUTIONARY BIOLOGY

A comparative study of ancient sedimentary DNA, pollen and macrofossils from permafrost sediments of northern Siberia reveals long-term vegetational stability

(2011) TINA JØRGENSEN et al.   MOLECULAR ECOLOGY

Secondary Metabolites in Bryophytes: An Ecological Aspect

(2009) Chun-Feng Xie et al.   CHEMISTRY & BIODIVERSITY

Vertical distribution of metabolically active eukaryotes in the water column and sediments of the Black Sea

(2009) Marco J.L. Coolen et al.   FEMS MICROBIOLOGY ECOLOGY

Modern pollen—vegetation relationships along an altitudinal transect in the central Pyrenees (southwestern Europe)

(2009) Núria Cañellas-Boltà et al.   HOLOCENE