Reconstructing long-term human impacts on plant communities: an ecological approach based on lake sediment DNA

unmarked: AnRPackage for Fitting Hierarchical Models of Wildlife Occurrence and Abundance

(2015) Ian Fiske et al.   Journal of Statistical Software

DNA metabarcoding and the cytochrome c oxidase subunit I marker: not a perfect match

(2014) B. E. Deagle et al.   Biology Letters

Replication levels, false presences and the estimation of the presence/absence from eDNA metabarcoding data

(2014) Gentile F. Ficetola et al.   Molecular Ecology Resources

Fifty thousand years of Arctic vegetation and megafaunal diet

(2014) Eske Willerslev et al.   NATURE

How old is the human footprint in the world's largest alpine ecosystem? A review of multiproxy records from the Tibetan Plateau from the ecologists' viewpoint

(2014) Georg Miehe et al.   QUATERNARY SCIENCE REVIEWS

Holocene changes in vegetation composition in northern Europe: why quantitative pollen-based vegetation reconstructions matter

(2014) Laurent Marquer et al.   QUATERNARY SCIENCE REVIEWS

Long livestock farming history and human landscape shaping revealed by lake sediment DNA

(2014) Charline Giguet-Covex et al.   Nature Communications

The Anthropocene

(2013) William F. Ruddiman   Annual Review of Earth and Planetary Sciences

Use of Ancient Sedimentary DNA as a Novel Conservation Tool for High-Altitude Tropical Biodiversity

(2013) SANNE BOESSENKOOL et al.   CONSERVATION BIOLOGY

Climatic and human impacts on mountain vegetation at Lauenensee (Bernese Alps, Switzerland) during the last 14,000 years

(2013) Fabian Rey et al.   HOLOCENE

Looking forward through the past: identification of 50 priority research questions in palaeoecology

(2013) Alistair W. R. Seddon et al.   JOURNAL OF ECOLOGY

Molecular- and pollen-based vegetation analysis in lake sediments from central Scandinavia

(2013) Laura Parducci et al.   MOLECULAR ECOLOGY

High montane–subalpine soils in the Montafon Valley (Austria, northern Alps) and their link to land-use, fire and settlement history

(2013) Astrid Roepke et al.   QUATERNARY INTERNATIONAL

A comparative study of ancient environmental DNA to pollen and macrofossils from lake sediments reveals taxonomic overlap and additional plant taxa

(2013) Mikkel Winther Pedersen et al.   QUATERNARY SCIENCE REVIEWS

Reconstructing the Microbial Diversity and Function of Pre-Agricultural Tallgrass Prairie Soils in the United States

(2013) N. Fierer et al.   SCIENCE

Ultra-deep sequencing enables high-fidelity recovery of biodiversity for bulk arthropod samples without PCR amplification

(2013) Xin Zhou et al.   GigaScience

Development of a real-time PCR method for the detection of fossil 16S rDNA fragments of phototrophic sulfur bacteria in the sediments of Lake Cadagno

(2012) D. F. RAVASI et al.   Geobiology

DNA from soil mirrors plant taxonomic and growth form diversity

(2012) N. G. YOCCOZ et al.   MOLECULAR ECOLOGY

Environmental DNA

(2012) PIERRE TABERLET et al.   MOLECULAR ECOLOGY

New environmental metabarcodes for analysing soil DNA: potential for studying past and present ecosystems

(2012) LAURA S. EPP et al.   MOLECULAR ECOLOGY

Hidden diversity in diatoms of Kenyan Lake Naivasha: a genetic approach detects temporal variation

(2012) KATHLEEN R. STOOF-LEICHSENRING et al.   MOLECULAR ECOLOGY

Soil sampling and isolation of extracellular DNA from large amount of starting material suitable for metabarcoding studies

(2012) PIERRE TABERLET et al.   MOLECULAR ECOLOGY

Towards next-generation biodiversity assessment using DNA metabarcoding

(2012) PIERRE TABERLET et al.   MOLECULAR ECOLOGY

Long-term perspective on wildfires in the western USA

(2012) J. R. Marlon et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ancient biomolecules in Quaternary palaeoecology

(2012) Michael Hofreiter et al.   QUATERNARY SCIENCE REVIEWS

Ancient DNA from lake sediments: Bridging the gap between paleoecology and genetics

(2011) Lynn L Anderson-Carpenter et al.   BMC EVOLUTIONARY BIOLOGY

Improving occupancy estimation when two types of observational error occur: non-detection and species misidentification

(2011) David A. Miller et al.   ECOLOGY

Late-Holocene land-use history and environmental changes at the high altitudes of St Antönien (Switzerland, Northern Alps): Combined evidence from pollen, soil and tree-ring analyses

(2011) Astrid Röpke et al.   HOLOCENE

Changes in erosion patterns during the Holocene in a currently treeless subalpine catchment inferred from lake sediment geochemistry (Lake Anterne, 2063 m a.s.l., NW French Alps): The role of climate and human activities

(2011) Charline Giguet-Covex et al.   HOLOCENE

Lakes as sentinels of climate change

(2011) Rita Adrian et al.   LIMNOLOGY AND OCEANOGRAPHY

A comparative study of ancient sedimentary DNA, pollen and macrofossils from permafrost sediments of northern Siberia reveals long-term vegetational stability

(2011) TINA JØRGENSEN et al.   MOLECULAR ECOLOGY

Anthropogenic transformation of the terrestrial biosphere

(2011) E. C. Ellis   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES

The Anthropocene: conceptual and historical perspectives

(2011) W. Steffen et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES

Frequency and intensity of high-altitude floods over the last 3.5 ka in northwestern French Alps (Lake Anterne)

(2011) Charline Giguet-Covex et al.   QUATERNARY RESEARCH

An In silico approach for the evaluation of DNA barcodes

(2010) Gentile Ficetola et al.   BMC GENOMICS

Expansion of green alder (Alnus alnobetula [Ehrh] K. Koch) in the northern French Alps: A palaeoecological point of view

(2010) Fernand David   COMPTES RENDUS BIOLOGIES

An example of the consequences of human activities on the evolution of subalpine landscapes

(2010) Fernand David   COMPTES RENDUS PALEVOL

Ecological assessment of estuarine sediments by pyrosequencing eukaryotic ribosomal DNA

(2010) Anthony A Chariton et al.   FRONTIERS IN ECOLOGY AND THE ENVIRONMENT

Species responses to fire, climate and human impact at tree line in the Alps as evidenced by palaeo-environmental records and a dynamic simulation model

(2010) Daniele Colombaroli et al.   JOURNAL OF ECOLOGY

Preservation, origin and genetic imprint of extracellular DNA in permanently anoxic deep-sea sediments

(2010) C. CORINALDESI et al.   MOLECULAR ECOLOGY

Using next-generation sequencing for molecular reconstruction of past Arctic vegetation and climate

(2010) J. H. SØNSTEBØ et al.   Molecular Ecology Resources

Fire, Fuel Composition and Resilience Threshold in Subalpine Ecosystem

(2010) Olivier Blarquez et al.   PLoS One

Pollen and non-pollen palynomorph evidence of medieval farming activities in southwestern Greenland

(2010) Emilie Gauthier et al.   VEGETATION HISTORY AND ARCHAEOBOTANY

Late-Holocene summer temperature reconstruction from chironomid assemblages of Lake Anterne, northern French Alps

(2009) Laurent Millet et al.   HOLOCENE

Trees in the subalpine belt since 11 700 cal. BP: origin, expansion and alteration of the modern forest

(2009) Olivier Blarquez et al.   HOLOCENE

Multidisciplinary approach to reconstructing local pastoral activities: an example from the Pyrenean Mountains (Pays Basque)

(2009) F. Mazier et al.   HOLOCENE

New perspectives in diet analysis based on DNA barcoding and parallel pyrosequencing: thetrnL approach

(2009) ALICE VALENTINI et al.   Molecular Ecology Resources

Extracellular DNA in soil and sediment: fate and ecological relevance

(2008) G. Pietramellara et al.   BIOLOGY AND FERTILITY OF SOILS

Prediction of plant species distributions across six millennia

(2008) Peter B. Pearman et al.   ECOLOGY LETTERS

Damage and degradation rates of extracellular DNA in marine sediments: implications for the preservation of gene sequences

(2008) C. CORINALDESI et al.   MOLECULAR ECOLOGY

The use of modelling and simulation approach in reconstructing past landscapes from fossil pollen data: a review and results from the POLLANDCAL network

(2008) Marie-José Gaillard et al.   VEGETATION HISTORY AND ARCHAEOBOTANY