Microbiota in the coelomic fluid of two common coastal starfish species and characterization of an abundant Helicobacter-related taxon

The highly variable microbiota associated to intestinal mucosa correlates with growth and hypoxia resistance of sea bass, Dicentrarchus labrax, submitted to different nutritional histories

(2016) François-Joël Gatesoupe et al.   BMC MICROBIOLOGY

Spatial and Temporal Dynamics of Pacific Oyster Hemolymph Microbiota across Multiple Scales

(2016) Ana Lokmer et al.   Frontiers in Microbiology

A high-resolution map of the gut microbiota in Atlantic salmon (Salmo salar): A basis for comparative gut microbial research

(2016) Karina Gajardo et al.   Scientific Reports

Identification and analysis of the bacterial endosymbiont specialized for production of the chemotherapeutic natural product ET-743

(2015) Michael M. Schofield et al.   ENVIRONMENTAL MICROBIOLOGY

An abundance of Epsilonproteobacteria revealed in the gut microbiome of the laboratory cultured sea urchin, Lytechinus variegatus

(2015) Joseph A. Hakim et al.   Frontiers in Microbiology

Phylogenomics of “Candidatus Hepatoplasma crinochetorum,” a Lineage of Mollicutes Associated with Noninsect Arthropods

(2014) Sébastien Leclercq et al.   Genome Biology and Evolution

From deep-sea volcanoes to human pathogens: a conserved quorum-sensing signal in Epsilonproteobacteria

(2014) Ileana Pérez-Rodríguez et al.   ISME Journal

Hemolymph microbiome of Pacific oysters in response to temperature, temperature stress and infection

(2014) Ana Lokmer et al.   ISME Journal

A Shrimp C-type Lectin Inhibits Proliferation of the Hemolymph Microbiota by Maintaining the Expression of Antimicrobial Peptides

(2014) Xian-Wei Wang et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Densovirus associated with sea-star wasting disease and mass mortality

(2014) Ian Hewson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Aquacultured Rainbow Trout (Oncorhynchus mykiss) Possess a Large Core Intestinal Microbiota That Is Resistant to Variation in Diet and Rearing Density

(2013) S. Wong et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

PEAR: a fast and accurate Illumina Paired-End reAd mergeR

(2013) J. Zhang et al.   BIOINFORMATICS

Buffer capacity of the coelomic fluid in echinoderms

(2013) Marie Collard et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY A-MOLECULAR & INTEGRATIVE PHYSIOLOGY

Allying with armored snails: the complete genome of gammaproteobacterial endosymbiont

(2013) Satoshi Nakagawa et al.   ISME Journal

Microbial Communities Associated with Holothurians: Presence of Unique Bacteria in the Coelomic Fluid

(2012) Masaki Enomoto et al.   MICROBES AND ENVIRONMENTS

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Francisella halioticida sp. nov., a pathogen of farmed giant abalone (Haliotis gigantea) in Japan

(2011) Ø.J. Brevik et al.   JOURNAL OF APPLIED MICROBIOLOGY

Francisella infections in fish and shellfish

(2011) T H Birkbeck et al.   JOURNAL OF FISH DISEASES

The saponins – polar isoprenoids with important and diverse biological activities

(2011) Anne Osbourn et al.   NATURAL PRODUCT REPORTS

mathFISH, a Web Tool That Uses Thermodynamics-Based Mathematical Models forIn SilicoEvaluation of Oligonucleotide Probes for FluorescenceIn SituHybridization

(2010) L. Safak Yilmaz et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Molecular Analysis of Gut Microflora in Captive-Raised Sea Urchins (Lytechinus variegatus)

(2010) Lawrence Nelson et al.   JOURNAL OF THE WORLD AQUACULTURE SOCIETY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Temporal study of Helicobacter pylori presence in coastal freshwater, estuary and marine waters

(2010) Katrina I. Twing et al.   WATER RESEARCH

Tularemia

(2009) Janet E. Foley et al.   VETERINARY MICROBIOLOGY

Host-specificity of environmentally transmitted Mycoplasma-like isopod symbionts

(2008) Sebastian Fraune et al.   ENVIRONMENTAL MICROBIOLOGY

Deep-sea vent chemoautotrophs: diversity, biochemistry and ecological significance

(2008) Satoshi Nakagawa et al.   FEMS MICROBIOLOGY ECOLOGY