Phylogenomics of “Candidatus Hepatoplasma crinochetorum,” a Lineage of Mollicutes Associated with Noninsect Arthropods

Phylogenomics and Molecular Signatures for Species from the Plant Pathogen-Containing Order Xanthomonadales

(2013) Hafiz Sohail Naushad et al.   PLoS One

Do diet and taxonomy influence insect gut bacterial communities?

(2012) D. R. Colman et al.   MOLECULAR ECOLOGY

Toward almost closed genomes with GapFiller

(2012) Marten Boetzer et al.   GENOME BIOLOGY

Easyfig: a genome comparison visualizer

(2011) M. J. Sullivan et al.   BIOINFORMATICS

A novel substitution matrix fitted to the compositional bias in Mollicutes improves the prediction of homologous relationships

(2011) Claire Lemaitre et al.   BMC BIOINFORMATICS

Short- and Long-term Evolutionary Dynamics of Bacterial Insertion Sequences: Insights from Wolbachia Endosymbionts

(2011) Nicolas Cerveau et al.   Genome Biology and Evolution

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Evolution and classification of the CRISPR–Cas systems

(2011) Kira S. Makarova et al.   NATURE REVIEWS MICROBIOLOGY

The impact of endosymbionts on the evolution of host sex-determination mechanisms

(2011) Richard Cordaux et al.   TRENDS IN GENETICS

CRISPR/Cas System and Its Role in Phage-Bacteria Interactions

(2010) Hélène Deveau et al.   Annual Review of Microbiology

Scaffolding pre-assembled contigs using SSPACE

(2010) Marten Boetzer et al.   BIOINFORMATICS

Remarkable Abundance and Evolution of Mobile Group II Introns in Wolbachia Bacterial Endosymbionts

(2010) S. Leclercq et al.   MOLECULAR BIOLOGY AND EVOLUTION

The CRISPR/Cas bacterial immune system cleaves bacteriophage and plasmid DNA

(2010) Josiane E. Garneau et al.   NATURE

CRISPR/Cas, the Immune System of Bacteria and Archaea

(2010) P. Horvath et al.   SCIENCE

‘CandidatusLumbricincola’, a novel lineage of unculturedMollicutesfrom earthworms of familyLumbricidae

(2009) Taras Y. Nechitaylo et al.   ENVIRONMENTAL MICROBIOLOGY

Genomics and Evolution of Heritable Bacterial Symbionts

(2008) Nancy A. Moran et al.   Annual Review of Genetics

Host-specificity of environmentally transmitted Mycoplasma-like isopod symbionts

(2008) Sebastian Fraune et al.   ENVIRONMENTAL MICROBIOLOGY

An Improved General Amino Acid Replacement Matrix

(2008) S. Q. Le et al.   MOLECULAR BIOLOGY AND EVOLUTION

Learning how to live together: genomic insights into prokaryote–animal symbioses

(2008) Andrés Moya et al.   NATURE REVIEWS GENETICS