An abundance of Epsilonproteobacteria revealed in the gut microbiome of the laboratory cultured sea urchin, Lytechinus variegatus

Composition and predicted functional ecology of mussel-associated bacteria in Indonesian marine lakes

(2015) Daniel F. R. Cleary et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

You Are What You Host: Microbiome Modulation of the Aging Process

(2014) Caroline Heintz et al.   CELL

Epsilonproteobacteria as gill epibionts of the hydrothermal vent gastropod Cyathermia naticoides (North East-Pacific Rise)

(2014) Magali Zbinden et al.   MARINE BIOLOGY

Generalization of the Partitioning of Shannon Diversity

(2014) Eric Marcon et al.   PLoS One

Bacterial Community Composition in the Gut Content and Ambient Sediment of Sea Cucumber Apostichopus japonicus Revealed by 16S rRNA Gene Pyrosequencing

(2014) Fei Gao et al.   PLoS One

PNAS Plus: From the Cover: Oligotyping analysis of the human oral microbiome

(2014) A. M. Eren et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Oligotyping reveals community level habitat selection within the genus Vibrio

(2014) Victor T. Schmidt et al.   Frontiers in Microbiology

Bacterial community shift in the coastal Gulf of Mexico salt-marsh sediment microcosm in vitro following exposure to the Mississippi Canyon Block 252 oil (MC252)

(2014) Hyunmin Koo et al.   3 Biotech

Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform

(2013) James J. Kozich et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Exploring host-microbiota interactions in animal models and humans

(2013) A. D. Kostic et al.   GENES & DEVELOPMENT

The microbiome of North Sea copepods

(2013) G. Gerdts et al.   HELGOLAND MARINE RESEARCH

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Ontogenetic variation in epibiont community structure in the deep-sea yeti crab,Kiwa puravida: convergence among crustaceans

(2013) Shana K. Goffredi et al.   MOLECULAR ECOLOGY

Oligotyping: differentiating between closely related microbial taxa using 16S rRNA gene data

(2013) A. Murat Eren et al.   Methods in Ecology and Evolution

Role of the gut microbiota in health and chronic gastrointestinal disease: understanding a hidden metabolic organ

(2013) Caitriona M. Guinane et al.   Therapeutic Advances in Gastroenterology

Folate status of gut microbiome affects Caenorhabditis elegans lifespan

(2012) Theresa PT Nguyen et al.   BMC BIOLOGY

Delayed accumulation of intestinal coliform bacteria enhances life span and stress resistance in Caenorhabditis elegans fed respiratory deficient E. coli

(2012) Fernando Gomez et al.   BMC MICROBIOLOGY

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

(2012) J Gregory Caporaso et al.   ISME Journal

Effect of Feed Protein and Carbohydrate Levels on Feed Intake, Growth, and Gonad Production of the Sea Urchin, Lytechinus variegatus

(2012) Hugh S. Hammer et al.   JOURNAL OF THE WORLD AQUACULTURE SOCIETY

Analysis of Stomach and Gut Microbiomes of the Eastern Oyster (Crassostrea virginica) from Coastal Louisiana, USA

(2012) Gary M. King et al.   PLoS One

Gut bacteria associated with different diets in reared Nephrops norvegicus

(2012) Alexandra Meziti et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Sea urchin fecal production and accumulation in a rocky subtidal ecosystem

(2011) LK Sauchyn et al.   Aquatic Biology

Evolutionary crossroads in developmental biology: sea urchins

(2011) D. R. McClay   DEVELOPMENT

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

(2011) Daniel McDonald et al.   ISME Journal

Complex intestinal bacterial communities in three species of planorbid snails

(2011) D. J. Van Horn et al.   JOURNAL OF MOLLUSCAN STUDIES

Drosophila Microbiome Modulates Host Developmental and Metabolic Homeostasis via Insulin Signaling

(2011) S. C. Shin et al.   SCIENCE

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Degradation of sea urchin feces in a rocky subtidal ecosystem: implications for nutrient cycling and energy flow

(2009) LK Sauchyn et al.   Aquatic Biology

PyNAST: a flexible tool for aligning sequences to a template alignment

(2009) J. G. Caporaso et al.   BIOINFORMATICS

Microbial diversity associated with the hydrothermal shrimpRimicaris exoculatagut and occurrence of a resident microbial community

(2009) Lucile Durand et al.   FEMS MICROBIOLOGY ECOLOGY

Fecal production by sea urchins in native and invaded algal beds

(2009) LK Sauchyn et al.   MARINE ECOLOGY PROGRESS SERIES

Characterization of the bacterial communities associated with the bald sea urchin disease of the echinoid Paracentrotus lividus

(2008) Pierre T. Becker et al.   JOURNAL OF INVERTEBRATE PATHOLOGY

Characterization of the bacterial community associated with body wall lesions of Tripneustes gratilla (Echinoidea) using culture-independent methods

(2008) Pierre T. Becker et al.   JOURNAL OF INVERTEBRATE PATHOLOGY