MALDI TOF MS profiling of bacteria at the strain level: A review

Automating data acquisition affects mass spectrum quality and reproducibility during bacterial profiling using an intact cell sample preparation method with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry

(2012) Stephanie Schumaker et al.   RAPID COMMUNICATIONS IN MASS SPECTROMETRY

Induction and identification of disulfide-intact and disulfide-reduced β-subunit of Shiga toxin 2 from Escherichia coli O157:H7 using MALDI-TOF-TOF-MS/MS and top-down proteomics

(2011) Clifton K. Fagerquist et al.   ANALYST

Direct detection of fatty acid ethyl esters using low temperature plasma (LTP) ambient ionization mass spectrometry for rapid bacterial differentiation

(2011) J. Isabella Zhang et al.   ANALYST

Haroun N. Shah, Saheer E. Gharbia (Eds.): Mass spectrometry for microbial proteomics

(2011) Rabih Jabbour   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

MALDI-ToF mass spectrometry–multivariate data analysis as a tool for classification of reactivation and non-culturable states of bacteria

(2011) Boris Kuehl et al.   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

Microbial systematics in the post-genomics era

(2011) Beile Gao et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Comparison of a multiplexed MassARRAY system with real-time allele-specific PCR technology for genotyping of methicillin-resistant Staphylococcus aureus

(2011) M.W. Syrmis et al.   CLINICAL MICROBIOLOGY AND INFECTION

Rapid species identification of seafood spoilage and pathogenic Gram-positive bacteria by MALDI-TOF mass fingerprinting

(2011) Karola Böhme et al.   ELECTROPHORESIS

Reduction of food matrix interference by a combination of sample preparation and multi-dimensional gating techniques to facilitate rapid, high sensitivity analysis for Escherichia coli serotype O157 by flow cytometry

(2011) Jon G. Wilkes et al.   FOOD MICROBIOLOGY

Genetic diversity of Lactobacillus paracasei isolated from in situ human oral biofilms

(2011) C.C.F. Parolo et al.   JOURNAL OF APPLIED MICROBIOLOGY

Characterization of a Yersinia enterocolitica biotype 1A strain harbouring an ail gene

(2011) B. Kraushaar et al.   JOURNAL OF APPLIED MICROBIOLOGY

Evaluation of MALDI-TOF MS as a tool for high-throughput dereplication

(2011) Jonas Ghyselinck et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Rapid species specific identification and subtyping of Yersinia enterocolitica by MALDI-TOF Mass spectrometry

(2011) Roger Stephan et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Characterization of propionic acid bacteria using matrix-assisted laser desorption/ionization (MALDI) mass spectrometry

(2011) L. I. Vorob’eva et al.   MICROBIOLOGY

Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry for the Identification of Clinically Relevant Bacteria

(2011) Cinzia Benagli et al.   PLoS One

A Comprehensive Evaluation of Colonic Mucosal Isolates of Sutterella wadsworthensis from Inflammatory Bowel Disease

(2011) Indrani Mukhopadhya et al.   PLoS One

Mould Routine Identification in the Clinical Laboratory by Matrix-Assisted Laser Desorption Ionization Time-Of-Flight Mass Spectrometry

(2011) Carole Cassagne et al.   PLoS One

Proteomics for routine identification of microorganisms

(2011) Martin Welker   PROTEOMICS

Lipid fingerprinting of Gram-positive lactobacilli by intact cells - matrix-assisted laser desorption/ionization mass spectrometry using a proton sponge based matrix

(2011) Cosima D. Calvano et al.   RAPID COMMUNICATIONS IN MASS SPECTROMETRY

Rapid identification of Legionella spp. by MALDI-TOF MS based protein mass fingerprinting

(2011) Valeria Gaia et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Typing of nitrogen-fixing Frankia strains by matrix-assisted laser desorption ionization-time-of-flight (MALDI-TOF) mass spectrometry

(2011) Dittmar Hahn et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Bacterial species identification from MALDI-TOF mass spectra through data analysis and machine learning

(2011) Katrien De Bruyne et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Evaluation of matrix-assisted laser desorption ionization-time of flight whole cell profiles for assessing the cultivable diversity of aerobic and moderately halophilic prokaryotes thriving in solar saltern sediments

(2011) Raul Munoz et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Tracing the transition of methicillin resistance in sub-populations of Staphylococcus aureus, using SELDI-TOF Mass Spectrometry and Artificial Neural Network Analysis

(2011) Haroun N. Shah et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Phenotypic and genotypic analyses of lactic acid bacteria in local fermented food, breast milk and faeces of mothers and their babies

(2011) Rima Albesharat et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Fourier-transform infrared spectroscopy combined with immunomagnetic separation as a tool to discriminate Salmonella serovars

(2010) Sílvia De Lamo-Castellví et al.   ANALYST

Rapid Identification of Protein Biomarkers ofEscherichia coliO157:H7 by Matrix-Assisted Laser Desorption Ionization-Time-of-Flight−Time-of-Flight Mass Spectrometry and Top-Down Proteomics

(2010) Clifton K. Fagerquist et al.   ANALYTICAL CHEMISTRY

Characterization of Yersinia Using MALDI-TOF Mass Spectrometry and Chemometrics

(2010) Peter Lasch et al.   ANALYTICAL CHEMISTRY

Application of Whole-Cell Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry for Rapid Identification and Clustering Analysis of Pantoea Species

(2010) F. Rezzonico et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Determination of Serotypes of Shiga Toxin-ProducingEscherichia coliIsolates by Intact Cell Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry

(2010) Axel Karger et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Identification and Typing of Lactococcus lactis by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry

(2010) K. Tanigawa et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Identification of the Corn Pathogen Pantoea stewartii by Mass Spectrometry of Whole-Cell Extracts and Its Detection with Novel PCR Primers

(2010) A. Wensing et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Rapid identification and typing of Yersinia pestis and other Yersinia species by matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF) mass spectrometry

(2010) Saravanan Ayyadurai et al.   BMC MICROBIOLOGY

Matrix-assisted laser desorption ionization time-of-flight mass spectrometry: usefulness for taxonomy and epidemiology

(2010) P.R. Murray   CLINICAL MICROBIOLOGY AND INFECTION

Safety Assessment of Fresh and Processed Seafood Products by MALDI-TOF Mass Fingerprinting

(2010) Karola Böhme et al.   Food and Bioprocess Technology

Comparison of MALDI-TOF/MS and LC-QTOF/MS methods for the identification of enteric bacteria

(2010) Tiffany M. Mott et al.   INTERNATIONAL JOURNAL OF MASS SPECTROMETRY

MALDI-TOF MS fingerprinting allows for discrimination of major methicillin-resistant Staphylococcus aureus lineages

(2010) Manuel Wolters et al.   INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY

High-Throughput Identification of Bacteria and Yeast by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry in Conventional Medical Microbiology Laboratories

(2010) S. Q. van Veen et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Rapid Genus- and Species-Specific Identification of Cronobacter spp. by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry

(2010) R. Stephan et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Comparison of Two Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry Methods with Conventional Phenotypic Identification for Routine Identification of Bacteria to the Species Level

(2010) A. Cherkaoui et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Identification of molecularly defined Staphylococcus aureus strains using matrix-assisted laser desorption/ionization time of flight mass spectrometry and the Biotyper 2.0 database

(2010) F. Szabados et al.   JOURNAL OF MEDICAL MICROBIOLOGY

Speciation of coagulase negative staphylococci, isolated from indoor air, using SDS page gel bands of expressed proteins followed by MALDI TOF MS and MALDI TOF-TOF MS-MS analysis of tryptic peptides

(2010) Karen Fox et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Identification ofYersinia pestisandEscherichia coliStrains by Whole Cell and Outer Membrane Protein Extracts with Mass Spectrometry-Based Proteomics

(2010) Rabih E. Jabbour et al.   JOURNAL OF PROTEOME RESEARCH

Classification of GenusPseudomonasby MALDI-TOF MS Based on Ribosomal Protein Coding inS10−spc−alphaOperon at Strain Level

(2010) Yudai Hotta et al.   JOURNAL OF PROTEOME RESEARCH

Sample preparation methods for MALDI-MS profiling of bacteria

(2010) Ondrej Šedo et al.   MASS SPECTROMETRY REVIEWS

Rapid discrimination of Legionella by matrix-assisted laser desorption ionization time-of-flight mass spectrometry

(2010) Yoshihito Fujinami et al.   MICROBIOLOGICAL RESEARCH

Phyloproteomic classification of unsequenced organisms by top-down identification of bacterial proteins using capLC-MS/MS on an Orbitrap

(2010) Colin Wynne et al.   PROTEOMICS

A quick and easy method to identify bacteria by matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry

(2010) Xaviera Pennanec et al.   RAPID COMMUNICATIONS IN MASS SPECTROMETRY

Application of matrix-assisted laser desorption/ionization time-of-flight mass spectrometry for the study ofHelicobacter pylori

(2010) Elena N. Ilina et al.   RAPID COMMUNICATIONS IN MASS SPECTROMETRY

Ribosomal protein profiling by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry for phylogenety-based subspecies resolution of Bifidobacterium longum

(2010) Hiroaki Sato et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Isolation and characterization of atypical Riemerella columbina strains from pigeons and their differentiation from Riemerella anatipestifer

(2010) Dennis Rubbenstroth et al.   VETERINARY MICROBIOLOGY

Top-Down Identification of Protein Biomarkers in Bacteria with Unsequenced Genomes

(2009) Colin Wynne et al.   ANALYTICAL CHEMISTRY

Discrimination and Phylogenomic Classification ofBacillus anthracis-cereus-thuringiensisStrains Based on LC-MS/MS Analysis of Whole Cell Protein Digests

(2009) Jacek P. Dworzanski et al.   ANALYTICAL CHEMISTRY

Ongoing Revolution in Bacteriology: Routine Identification of Bacteria by Matrix‐Assisted Laser Desorption Ionization Time‐of‐Flight Mass Spectrometry

(2009) Piseth Seng et al.   CLINICAL INFECTIOUS DISEASES

High throughput identification of clinical isolates of Staphylococcus aureus using MALDI-TOF-MS of intact cells

(2009) Lakshani Rajakaruna et al.   INFECTION GENETICS AND EVOLUTION

Phylogenetic analysis of Rhodococcus erythropolis based on the variation of ribosomal proteins as observed by matrix-assisted laser desorption ionization-mass spectrometry without using genome information

(2009) Kanae Teramoto et al.   JOURNAL OF BIOSCIENCE AND BIOENGINEERING

High Interlaboratory Reproducibility of Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry-Based Species Identification of Nonfermenting Bacteria

(2009) A. Mellmann et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry for Fast and Reliable Identification of Clinical Yeast Isolates

(2009) G. Marklein et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Rapid Determination of Quinolone Resistance in Acinetobacter spp.

(2009) K. M. Hujer et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Identification of Streptococcus agalactiae Isolates from Various Phylogenetic Lineages by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry

(2009) M.-F. Lartigue et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Identification of a Variety ofStaphylococcusSpecies by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry

(2009) Damien Dubois et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Phylogenetic classification and identification of bacteria by mass spectrometry

(2009) Anja Freiwald et al.   Nature Protocols

Mass spectrometry tools for the classification and identification of bacteria

(2009) Sascha Sauer et al.   NATURE REVIEWS MICROBIOLOGY

Shotgun mass mapping of Lactobacillus species and subspecies from caries related isolates by MALDI-MS

(2009) Frank Schmidt et al.   PROTEOMICS

Evaluation of matrix-assisted laser desorption/ionization (MALDI) preparation techniques for surface characterization of intactFusariumspores by MALDI linear time-of-flight mass spectrometry

(2009) Jasmin Kemptner et al.   RAPID COMMUNICATIONS IN MASS SPECTROMETRY

Challenging the problem of clostridial identification with matrix-assisted laser desorption and ionization–time-of-flight mass spectrometry (MALDI–TOF MS)

(2008) Anke Grosse-Herrenthey et al.   ANAEROBE

Biomarker Profiling and Reproducibility Study of MALDI-MS Measurements ofEscherichia coliby Analysis of Variance−Principal Component Analysis

(2008) Ping Chen et al.   ANALYTICAL CHEMISTRY

Mass Spectrometry for Rapid Characterization of Microorganisms

(2008) Plamen A. Demirev et al.   Annual Review of Analytical Chemistry

Differentiation of Streptococcus pneumoniae Conjunctivitis Outbreak Isolates by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry

(2008) Y. M. Williamson et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Rapid Classification and Identification of Salmonellae at the Species and Subspecies Levels by Whole-Cell Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry

(2008) R. Dieckmann et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Rapid Identification and Typing of Listeria Species by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry

(2008) S. B. Barbuddhe et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

MALDI-TOF mass spectrometry as a tool for differentiation of invasive and noninvasiveStreptococcus pyogenesisolates

(2008) Hercules Moura et al.   FEMS IMMUNOLOGY AND MEDICAL MICROBIOLOGY

Evaluation of Matrix-Assisted Laser Desorption Ionization-Time-of-Flight Mass Spectrometry in Comparison to 16S rRNA Gene Sequencing for Species Identification of Nonfermenting Bacteria

(2008) A. Mellmann et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Mass spectrometry in biodefense

(2008) Plamen A. Demirev et al.   JOURNAL OF MASS SPECTROMETRY

Matrix-assisted laser desorption ionisation-time-of of-flight mass spectrometry of intact cells allows rapid identification of Burkholderia cepacia complex

(2008) Elke Vanlaere et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Direct Bacterial Profiling by Matrix-Assisted Laser Desorption−Ionization Time-of-Flight Mass Spectrometry for Identification of Pathogenic Neisseria

(2008) Elena N. Ilina et al.   JOURNAL OF MOLECULAR DIAGNOSTICS

Liquid chromatography/mass spectrometry characterization of Escherichia coli and Shigella species

(2008) Robert A. Everley et al.   JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY

Ibis T5000: a universal biosensor approach for microbiology

(2008) David J. Ecker et al.   NATURE REVIEWS MICROBIOLOGY

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

(2008) J. R. Cole et al.   NUCLEIC ACIDS RESEARCH

Classification and Identification of Bacteria by Mass Spectrometry and Computational Analysis

(2008) Sascha Sauer et al.   PLoS One

Characterization of environmental isolates of Enterococcus spp. by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry

(2007) Rebecca A. Giebel et al.   WATER RESEARCH