标题
Thermal proteome profiling for interrogating protein interactions
作者
关键词
-
出版物
Molecular Systems Biology
Volume 16, Issue 3, Pages -
出版商
EMBO
发表日期
2020-03-05
DOI
10.15252/msb.20199232
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Outer membrane lipoprotein NlpI scaffolds peptidoglycan hydrolases within multi‐enzyme complexes in Escherichia coli
- (2020) Manuel Banzhaf et al. EMBO JOURNAL
- Identifying drug targets in tissues and whole blood with thermal-shift profiling
- (2020) Jessica Perrin et al. NATURE BIOTECHNOLOGY
- Identifying purine nucleoside phosphorylase as the target of quinine using cellular thermal shift assay
- (2019) Jerzy M. Dziekan et al. Science Translational Medicine
- Combining LOPIT with differential ultracentrifugation for high-resolution spatial proteomics
- (2019) Aikaterini Geladaki et al. Nature Communications
- Proteome-wide solubility and thermal stability profiling reveals distinct regulatory roles for ATP
- (2019) Sindhuja Sridharan et al. Nature Communications
- Monitoring structural modulation of redox-sensitive proteins in cells with MS-CETSA
- (2019) Wendi Sun et al. Redox Biology
- Proteome Integral Solubility Alteration (PISA): a high-throughput proteomics assay for target deconvolution
- (2019) Massimiliano Gaetani et al. JOURNAL OF PROTEOME RESEARCH
- High throughput discovery of functional protein modifications by Hotspot Thermal Profiling
- (2019) Jun X. Huang et al. NATURE METHODS
- TMTpro: Design, Synthesis, and Initial Evaluation of a Proline-Based Isobaric 16-Plex Tandem Mass Tag Reagent Set
- (2019) Andrew Thompson et al. ANALYTICAL CHEMISTRY
- Nonparametric Analysis of Thermal Proteome Profiles Reveals Novel Drug-binding Proteins
- (2019) Dorothee Childs et al. MOLECULAR & CELLULAR PROTEOMICS
- The functional landscape of the human phosphoproteome
- (2019) David Ochoa et al. NATURE BIOTECHNOLOGY
- Detection of Chemical Engagement of Solute Carrier Proteins by a Cellular Thermal Shift Assay
- (2018) Mari Hashimoto et al. ACS Chemical Biology
- Multiplexed Proteome Dynamics Profiling Reveals Mechanisms Controlling Protein Homeostasis
- (2018) Mikhail M. Savitski et al. CELL
- A Map of Protein-Metabolite Interactions Reveals Principles of Chemical Communication
- (2018) Ilaria Piazza et al. CELL
- Modulation of Protein-Interaction States through the Cell Cycle
- (2018) Lingyun Dai et al. CELL
- Pervasive Protein Thermal Stability Variation during the Cell Cycle
- (2018) Isabelle Becher et al. CELL
- Discovery, research, and development of new antibiotics: the WHO priority list of antibiotic-resistant bacteria and tuberculosis
- (2018) Evelina Tacconelli et al. LANCET INFECTIOUS DISEASES
- Targeting CDK2 overcomes melanoma resistance against BRAF and Hsp90 inhibitors
- (2018) Alireza Azimi et al. Molecular Systems Biology
- Thermal proteome profiling in bacteria: probing protein state in vivo
- (2018) André Mateus et al. Molecular Systems Biology
- BoxCar acquisition method enables single-shot proteomics at a depth of 10,000 proteins in 100 minutes
- (2018) Florian Meier et al. NATURE METHODS
- EASI-tag enables accurate multiplexed and interference-free MS2-based proteome quantification
- (2018) Sebastian Virreira Winter et al. NATURE METHODS
- Widespread bacterial protein histidine phosphorylation revealed by mass spectrometry-based proteomics
- (2018) Clement M Potel et al. NATURE METHODS
- Thermal proximity coaggregation for system-wide profiling of protein complex dynamics in cells
- (2018) Chris Soon Heng Tan et al. SCIENCE
- Systematic analysis of protein turnover in primary cells
- (2018) Toby Mathieson et al. Nature Communications
- SHMT2 and the BRCC36/BRISC deubiquitinase regulate HIV-1 Tat K63-ubiquitylation and destruction by autophagy
- (2018) Muyu Xu et al. PLoS Pathogens
- Proteome-wide analysis of protein thermal stability in the model higher plant Arabidopsis thaliana
- (2018) Jeremy D. Volkening et al. MOLECULAR & CELLULAR PROTEOMICS
- Single-pot, solid-phase-enhanced sample preparation for proteomics experiments
- (2018) Christopher S. Hughes et al. Nature Protocols
- An efficient proteome-wide strategy for discovery and characterization of cellular nucleotide-protein interactions
- (2018) Yan Ting Lim et al. PLoS One
- Measuring protein structural changes on a proteome-wide scale using limited proteolysis-coupled mass spectrometry
- (2017) Simone Schopper et al. Nature Protocols
- Biomolecular condensates: organizers of cellular biochemistry
- (2017) Salman F. Banani et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Cell-wide analysis of protein thermal unfolding reveals determinants of thermostability
- (2017) Pascal Leuenberger et al. SCIENCE
- Liquid phase condensation in cell physiology and disease
- (2017) Yongdae Shin et al. SCIENCE
- Dual blockade of the lipid kinase PIP4Ks and mitotic pathways leads to cancer-selective lethality
- (2017) Mayumi Kitagawa et al. Nature Communications
- CETSA quantitatively verifies in vivo target engagement of novel RIPK1 inhibitors in various biospecimens
- (2017) Tsuyoshi Ishii et al. Scientific Reports
- Phase separation in biology; functional organization of a higher order
- (2016) Diana M. Mitrea et al. Cell Communication and Signaling
- An Unbiased Chemical Proteomics Method Identifies FabI as the Primary Target of 6-OH-BDE-47
- (2016) Hui Peng et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- Antibacterial drug discovery in the resistance era
- (2016) Eric D. Brown et al. NATURE
- Mass-spectrometric exploration of proteome structure and function
- (2016) Ruedi Aebersold et al. NATURE
- Thermal profiling reveals phenylalanine hydroxylase as an off-target of panobinostat
- (2016) Isabelle Becher et al. Nature Chemical Biology
- Thermal proteome profiling: unbiased assessment of protein state through heat-induced stability changes
- (2016) André Mateus et al. Proteome Science
- Phase Separation: Linking Cellular Compartmentalization to Disease
- (2016) Adriano Aguzzi et al. TRENDS IN CELL BIOLOGY
- Parallel Accumulation–Serial Fragmentation (PASEF): Multiplying Sequencing Speed and Sensitivity by Synchronized Scans in a Trapped Ion Mobility Device
- (2015) Florian Meier et al. JOURNAL OF PROTEOME RESEARCH
- A selective inhibitor of PRMT5 with in vivo and in vitro potency in MCL models
- (2015) Elayne Chan-Penebre et al. Nature Chemical Biology
- Proteome-wide drug and metabolite interaction mapping by thermal-stability profiling
- (2015) Kilian V M Huber et al. NATURE METHODS
- Thermal proteome profiling monitors ligand interactions with cellular membrane proteins
- (2015) Friedrich B M Reinhard et al. NATURE METHODS
- Polymer physics of intracellular phase transitions
- (2015) Clifford P. Brangwynne et al. Nature Physics
- Thermal proteome profiling for unbiased identification of direct and indirect drug targets using multiplexed quantitative mass spectrometry
- (2015) Holger Franken et al. Nature Protocols
- limma powers differential expression analyses for RNA-sequencing and microarray studies
- (2015) Matthew E. Ritchie et al. NUCLEIC ACIDS RESEARCH
- MultiNotch MS3 Enables Accurate, Sensitive, and Multiplexed Detection of Differential Expression across Cancer Cell Line Proteomes
- (2014) Graeme C. McAlister et al. ANALYTICAL CHEMISTRY
- Ion Coalescence of Neutron Encoded TMT 10-Plex Reporter Ions
- (2014) Thilo Werner et al. ANALYTICAL CHEMISTRY
- Ultrasensitive proteome analysis using paramagnetic bead technology
- (2014) C. S. Hughes et al. Molecular Systems Biology
- Stereospecific targeting of MTH1 by (S)-crizotinib as an anticancer strategy
- (2014) Kilian V. M. Huber et al. NATURE
- A draft map of the human proteome
- (2014) Min-Sik Kim et al. NATURE
- MTH1 inhibition eradicates cancer by preventing sanitation of the dNTP pool
- (2014) Helge Gad et al. NATURE
- Mass-spectrometry-based draft of the human proteome
- (2014) Mathias Wilhelm et al. NATURE
- Global analysis of protein structural changes in complex proteomes
- (2014) Yuehan Feng et al. NATURE BIOTECHNOLOGY
- The cellular thermal shift assay for evaluating drug target interactions in cells
- (2014) Rozbeh Jafari et al. Nature Protocols
- Tracking cancer drugs in living cells by thermal profiling of the proteome
- (2014) M. M. Savitski et al. SCIENCE
- Measuring and Managing Ratio Compression for Accurate iTRAQ/TMT Quantification
- (2013) Mikhail M. Savitski et al. JOURNAL OF PROTEOME RESEARCH
- Monitoring Drug Target Engagement in Cells and Tissues Using the Cellular Thermal Shift Assay
- (2013) D. M. Molina et al. SCIENCE
- High-Resolution Enabled TMT 8-plexing
- (2012) Thilo Werner et al. ANALYTICAL CHEMISTRY
- Thermodynamic analysis of protein-ligand binding interactions in complex biological mixtures using the stability of proteins from rates of oxidation
- (2012) Erin C Strickland et al. Nature Protocols
- Global quantification of mammalian gene expression control
- (2011) Björn Schwanhäusser et al. NATURE
- MS3 eliminates ratio distortion in isobaric multiplexed quantitative proteomics
- (2011) Lily Ting et al. NATURE METHODS
- Addressing Accuracy and Precision Issues in iTRAQ Quantitation
- (2010) Natasha A. Karp et al. MOLECULAR & CELLULAR PROTEOMICS
- Universal sample preparation method for proteome analysis
- (2009) Jacek R Wiśniewski et al. NATURE METHODS
- MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification
- (2008) Jürgen Cox et al. NATURE BIOTECHNOLOGY
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started