Measuring protein structural changes on a proteome-wide scale using limited proteolysis-coupled mass spectrometry
出版年份 2017 全文链接
标题
Measuring protein structural changes on a proteome-wide scale using limited proteolysis-coupled mass spectrometry
作者
关键词
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出版物
Nature Protocols
Volume 12, Issue 11, Pages 2391-2410
出版商
Springer Nature
发表日期
2017-10-26
DOI
10.1038/nprot.2017.100
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Cell-wide analysis of protein thermal unfolding reveals determinants of thermostability
- (2017) Pascal Leuenberger et al. SCIENCE
- L-Arginine Modulates T Cell Metabolism and Enhances Survival and Anti-tumor Activity
- (2016) Roger Geiger et al. CELL
- OpenMS: a flexible open-source software platform for mass spectrometry data analysis
- (2016) Hannes L Röst et al. NATURE METHODS
- Molecular architecture of the inner ring scaffold of the human nuclear pore complex
- (2016) J. Kosinski et al. SCIENCE
- Proteome-wide profiling of protein assemblies by cross-linking mass spectrometry
- (2015) Fan Liu et al. NATURE METHODS
- One-hour proteome analysis in yeast
- (2015) Alicia L Richards et al. Nature Protocols
- Chemoproteomics Reveals Time-Dependent Binding of Histone Deacetylase Inhibitors to Endogenous Repressor Complexes
- (2014) Isabelle Becher et al. ACS Chemical Biology
- MSstats: an R package for statistical analysis of quantitative mass spectrometry-based proteomic experiments
- (2014) Meena Choi et al. BIOINFORMATICS
- Stepwise Priming by Acidic pH and a High K+ Concentration Is Required for Efficient Uncoating of Influenza A Virus Cores after Penetration
- (2014) S. Stauffer et al. JOURNAL OF VIROLOGY
- Global analysis of protein structural changes in complex proteomes
- (2014) Yuehan Feng et al. NATURE BIOTECHNOLOGY
- Tracking cancer drugs in living cells by thermal profiling of the proteome
- (2014) M. M. Savitski et al. SCIENCE
- Open source libraries and frameworks for mass spectrometry based proteomics: A developer's perspective
- (2013) Yasset Perez-Riverol et al. BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS
- Automated selected reaction monitoring data analysis workflow for large-scale targeted proteomic studies
- (2013) Silvia Surinova et al. Nature Protocols
- Lysine-specific chemical cross-linking of protein complexes and identification of cross-linking sites using LC-MS/MS and the xQuest/xProphet software pipeline
- (2013) Alexander Leitner et al. Nature Protocols
- Mass spectrometry of intact membrane protein complexes
- (2013) Arthur Laganowsky et al. Nature Protocols
- Large-Scale Quantitative Assessment of Different In-Solution Protein Digestion Protocols Reveals Superior Cleavage Efficiency of Tandem Lys-C/Trypsin Proteolysis over Trypsin Digestion
- (2012) Timo Glatter et al. JOURNAL OF PROTEOME RESEARCH
- Selected reaction monitoring–based proteomics: workflows, potential, pitfalls and future directions
- (2012) Paola Picotti et al. NATURE METHODS
- Enhanced identification of peptides lacking basic residues by LC-ESI-MS/MS analysis of singly charged peptides
- (2012) Martin L. Biniossek et al. PROTEOMICS
- Structural Probing of a Protein Phosphatase 2A Network by Chemical Cross-Linking and Mass Spectrometry
- (2012) F. Herzog et al. SCIENCE
- More than 100,000 Detectable Peptide Species Elute in Single Shotgun Proteomics Runs but the Majority is Inaccessible to Data-Dependent LC−MS/MS
- (2011) Annette Michalski et al. JOURNAL OF PROTEOME RESEARCH
- Oxidative protein labeling in mass-spectrometry-based proteomics
- (2010) Julien Roeser et al. ANALYTICAL AND BIOANALYTICAL CHEMISTRY
- Stoichiometry and Topology of the Complex of the Endogenous ATP Synthase Inhibitor Protein IF1with Calmodulin
- (2010) Daniela Pagnozzi et al. BIOCHEMISTRY
- Skyline: an open source document editor for creating and analyzing targeted proteomics experiments
- (2010) Brendan MacLean et al. BIOINFORMATICS
- Hydrogen exchange mass spectrometry for studying protein structure and dynamics
- (2010) Lars Konermann et al. CHEMICAL SOCIETY REVIEWS
- Mass spectrometry–based proteomics in cell biology
- (2010) Tobias C. Walther et al. JOURNAL OF CELL BIOLOGY
- Characterization of a unique IgG1 mAb CEX profile by limited Lys-C proteolysis/CEX separation coupled with mass spectrometry and structural analysis
- (2010) Jaewon Kim et al. JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES
- A Quantitative Study of the Effects of Chaotropic Agents, Surfactants, and Solvents on the Digestion Efficiency of Human Plasma Proteins by Trypsin
- (2010) Jennifer L. Proc et al. JOURNAL OF PROTEOME RESEARCH
- An improved trypsin digestion method minimizes digestion-induced modifications on proteins
- (2009) Da Ren et al. ANALYTICAL BIOCHEMISTRY
- Protein structure determination in living cells by in-cell NMR spectroscopy
- (2009) Daisuke Sakakibara et al. NATURE
- Probing protein structure by amino acid-specific covalent labeling and mass spectrometry
- (2008) Vanessa Leah Mendoza et al. MASS SPECTROMETRY REVIEWS
- MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification
- (2008) Jürgen Cox et al. NATURE BIOTECHNOLOGY
- Influenza A Virus M1 Protein Structure Probed by In Situ Limited Proteolysis with Bromelain
- (2008) L. Kordyukova et al. PROTEIN AND PEPTIDE LETTERS
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