Implementing meta-analysis from genome-wide association studies for pork quality traits1

Genome-wide association analysis identifies quantitative trait loci for growth in a Landrace purebred population

(2014) E. J. Jung et al.   ANIMAL GENETICS

Genome-wide association analysis for growth, muscularity and meat quality in Piétrain pigs

(2014) P. Stratz et al.   ANIMAL GENETICS

Rapid screening for phenotype-genotype associations by linear transformations of genomic evaluations

(2014) Jose L Gualdrón Duarte et al.   BMC BIOINFORMATICS

Comparison of single-trait and multiple-trait genomic prediction models

(2014) Gang Guo et al.   BMC GENETICS

Genome-wide association and systems genetic analyses of residual feed intake, daily feed consumption, backfat and weight gain in pigs

(2014) Duy Do et al.   BMC GENETICS

A General Unified Framework to Assess the Sampling Variance of Heritability Estimates Using Pedigree or Marker-Based Relationships

(2014) P. M. Visscher et al.   GENETICS

µ-Calpain, calpastatin, and growth hormone receptor genetic effects on preweaning performance, carcass quality traits, and residual variance of tenderness in Angus cattle selected to increase minor haplotype and allele frequencies1,2,3

(2014) R. G. Tait et al.   JOURNAL OF ANIMAL SCIENCE

Reliability of molecular breeding values for Warner-Bratzler shear force and carcass traits of beef cattle – An independent validation study1

(2014) E. C. Akanno et al.   JOURNAL OF ANIMAL SCIENCE

The Longissimus and Semimembranosus Muscles Display Marked Differences in Their Gene Expression Profiles in Pig

(2014) Frederic Herault et al.   PLoS One

A Multi-Trait, Meta-analysis for Detecting Pleiotropic Polymorphisms for Stature, Fatness and Reproduction in Beef Cattle

(2014) Sunduimijid Bolormaa et al.   PLoS Genetics

Methods of tagSNP selection and other variables affecting imputation accuracy in swine

(2013) Yvonne M Badke et al.   BMC GENETICS

Genotype imputation accuracy in a F2 pig population using high density and low density SNP panels

(2013) Jose L Gualdrón Duarte et al.   BMC GENETICS

Evidence for three highly significant QTL for meat quality traits in the Finnish Yorkshire pig breed1

(2013) P. Uimari et al.   JOURNAL OF ANIMAL SCIENCE

Genome-wide association of meat quality traits and tenderness in swine1,2

(2013) D. J. Nonneman et al.   JOURNAL OF ANIMAL SCIENCE

Meta-analysis of genetic parameter estimates for reproduction, growth and carcass traits of pigs in the tropics

(2013) E.C. Akanno et al.   Livestock Science

Meta-analysis methods for genome-wide association studies and beyond

(2013) Evangelos Evangelou et al.   NATURE REVIEWS GENETICS

Genome-Wide Association Study of Meat Quality Traits in a White Duroc×Erhualian F2 Intercross and Chinese Sutai Pigs

(2013) Junwu Ma et al.   PLoS One

Genetic parameters for haemoglobin levels in pigs and iron content in pork

(2012) S. Hermesch et al.   Animal

Genome-wide association analysis for quantitative trait loci influencing Warner-Bratzler shear force in five taurine cattle breeds

(2012) M. C. McClure et al.   ANIMAL GENETICS

SNP variation in the promoter of the PRKAG3 gene and association with meat quality traits in pig

(2012) Marion T Ryan et al.   BMC GENETICS

Inferences from Genomic Models in Stratified Populations

(2012) L. Janss et al.   GENETICS

Genome-wide association mapping including phenotypes from relatives without genotypes

(2012) H. WANG et al.   Genetics Research

Chilling rate effects on pork loin tenderness in commercial processing plants1,2

(2012) S. D. Shackelford et al.   JOURNAL OF ANIMAL SCIENCE

Association of single nucleotide polymorphism (SNP) markers in candidate genes and QTL regions with pork quality traits in commercial pigs

(2012) G.A. Rohrer et al.   MEAT SCIENCE

Meta-Analysis of Two Genome-Wide Association Studies of Bovine Paratuberculosis

(2012) Giulietta Minozzi et al.   PLoS One

Joint analysis of quantitative trait loci and major-effect causative mutations affecting meat quality and carcass composition traits in pigs

(2011) Pierre Cherel et al.   BMC GENETICS

Optimal methods for meta-analysis of genome-wide association studies

(2011) Baiyu Zhou et al.   GENETIC EPIDEMIOLOGY

Development of a system for classification of pork loins for tenderness using visible and near-infrared reflectance spectroscopy1,2

(2011) S. D. Shackelford et al.   JOURNAL OF ANIMAL SCIENCE

Predictive markers in calpastatin for tenderness in commercial pig populations1,2

(2011) D. Nonneman et al.   JOURNAL OF ANIMAL SCIENCE

Use of visible and near-infrared spectroscopy to predict pork longissimus lean color stability1,2,3

(2011) D. A. King et al.   JOURNAL OF ANIMAL SCIENCE

Lessons to learn about postmortem metabolism using the AMPKγ3R200Q mutation in the pig

(2011) Tracy L. Scheffler et al.   MEAT SCIENCE

Molecular and functional characterization of glycogen synthase in the porcine satellite cells under insulin treatment

(2011) Linjie Wang et al.   MOLECULAR AND CELLULAR BIOCHEMISTRY

Transcriptional Profiling of Chondrodysplasia Growth Plate Cartilage Reveals Adaptive ER-Stress Networks That Allow Survival but Disrupt Hypertrophy

(2011) Trevor L. Cameron et al.   PLoS One

Genetic parameters of meat quality traits in two pig breeds measured by rapid methods

(2010) E. Gjerlaug-Enger et al.   Animal

Meta-analysis of results from quantitative trait loci mapping studies on pig chromosome 4

(2010) K. M. Silva et al.   ANIMAL GENETICS

Identification of expression QTL (eQTL) of genes expressed in porcine M. longissimus dorsi and associated with meat quality traits

(2010) Siriluck Ponsuksili et al.   BMC GENOMICS

Meta-analysis of the effect of the halothane gene on 6 variables of pig meat quality and on carcass leanness1

(2010) B. Salmi et al.   JOURNAL OF ANIMAL SCIENCE

A Unified Approach to Genotype Imputation and Haplotype-Phase Inference for Large Data Sets of Trios and Unrelated Individuals

(2009) Brian L. Browning et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Relationships amongcalpastatinsingle nucleotide polymorphisms,calpastatinexpression and tenderness in pork longissimus

(2009) A. K. Lindholm-Perry et al.   ANIMAL GENETICS

The Biology of Cystatin M/E and its Cognate Target Proteases

(2009) Patrick L.J.M. Zeeuwen et al.   JOURNAL OF INVESTIGATIVE DERMATOLOGY

Design of a High Density SNP Genotyping Assay in the Pig Using SNPs Identified and Characterized by Next Generation Sequencing Technology

(2009) Antonio M. Ramos et al.   PLoS One

Investigating the genetic basis of pork tenderness: genomic analysis of porcineCAST

(2008) S. N. Meyers et al.   ANIMAL GENETICS

Genome-wide identification of quantitative trait loci in a cross between Hampshire and Landrace II: Meat quality traits

(2008) Ellen Markljung et al.   BMC GENETICS

Single- and joint-population analyses of two experimental pig crosses to confirm quantitative trait loci on Sus scrofa chromosome 6 and leptin receptor effects on fatness and growth traits1

(2008) G. Muñoz et al.   JOURNAL OF ANIMAL SCIENCE

Efficient Methods to Compute Genomic Predictions

(2008) P.M. VanRaden   JOURNAL OF DAIRY SCIENCE

Quantitative trait locus mapping in an F2 Duroc × Pietrain resource population: II. Carcass and meat quality traits1

(2007) D. B. Edwards et al.   JOURNAL OF ANIMAL SCIENCE