Concordant divergence of mitogenomes and a mitonuclear gene cluster in bird lineages inhabiting different climates

Climate-driven mitochondrial selection: A test in Australian songbirds

(2018) Annika Mae Lamb et al.   MOLECULAR ECOLOGY

Interpreting the genomic landscape of speciation: a road map for finding barriers to gene flow

(2017) M. Ravinet et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Whole-genome patterns of linkage disequilibrium across flycatcher populations clarify the causes and consequences of fine-scale recombination rate variation in birds

(2017) Takeshi Kawakami et al.   MOLECULAR ECOLOGY

Perpendicular axes of differentiation generated by mitochondrial introgression

(2017) Hernán E. Morales et al.   MOLECULAR ECOLOGY

The on-again, off-again relationship between mitochondrial genomes and species boundaries

(2017) Daniel B. Sloan et al.   MOLECULAR ECOLOGY

The computer program structure for assigning individuals to populations: easy to use but easier to misuse

(2017) Jinliang Wang   Molecular Ecology Resources

Adaptive introgression from distant Caribbean islands contributed to the diversification of a microendemic adaptive radiation of trophic specialist pupfishes

(2017) Emilie J. Richards et al.   PLoS Genetics

Evolved genetic and phenotypic differences due to mitochondrial-nuclear interactions

(2017) Tara Z. Baris et al.   PLoS Genetics

Integrative Approaches for Studying Mitochondrial and Nuclear Genome Co-evolution in Oxidative Phosphorylation

(2017) Paul Sunnucks et al.   Frontiers in Genetics

Chromosomal inversion differences correlate with range overlap in passerine birds

(2017) Daniel M. Hooper et al.   Nature Ecology & Evolution

Finding the Genomic Basis of Local Adaptation: Pitfalls, Practical Solutions, and Future Directions

(2016) Sean Hoban et al.   AMERICAN NATURALIST

Neutral and selective drivers of colour evolution in a widespread Australian passerine

(2016) Hernán E. Morales et al.   JOURNAL OF BIOGEOGRAPHY

Heterogeneous genome divergence, differential introgression, and the origin and structure of hybrid zones

(2016) Richard G. Harrison et al.   MOLECULAR ECOLOGY

Recurrent selection explains parallel evolution of genomic regions of high relative but low absolute differentiation in a ring species

(2016) Darren E. Irwin et al.   MOLECULAR ECOLOGY

A genomic perspective on hybridization and speciation

(2016) Bret A. Payseur et al.   MOLECULAR ECOLOGY

Structure of mammalian respiratory complex I

(2016) Jiapeng Zhu et al.   NATURE

Atomic structure of the entire mammalian mitochondrial complex I

(2016) Karol Fiedorczuk et al.   NATURE

Making sense of genomic islands of differentiation in light of speciation

(2016) Jochen B. W. Wolf et al.   NATURE REVIEWS GENETICS

Genomics of Rapid Incipient Speciation in Sympatric Threespine Stickleback

(2016) David A. Marques et al.   PLoS Genetics

Gene flow betweenDrosophila yakubaandDrosophila santomeain subunit V of cytochromecoxidase: A potential case of cytonuclear cointrogression

(2015) Emily A. Beck et al.   EVOLUTION

The genetic architecture of hybrid incompatibilities and their effect on barriers to introgression in secondary contact

(2015) Dorothea Lindtke et al.   EVOLUTION

Climate adaptation and speciation: particular focus on reproductive barriers inFicedulaflycatchers

(2015) Anna Qvarnström et al.   Evolutionary Applications

The Sex Specific Genetic Variation of Energetics in Bank Voles, Consequences of Introgression?

(2015) Zbyszek Boratyński et al.   Evolutionary Biology

Mitochondrial Involvement in Vertebrate Speciation? The Case of Mito-nuclear Genetic Divergence in Chameleons

(2015) Dan Bar-Yaacov et al.   Genome Biology and Evolution

Positive and purifying selection in mitochondrial genomes of a bird with mitonuclear discordance

(2015) Hernán E. Morales et al.   MOLECULAR ECOLOGY

Clumpak : a program for identifying clustering modes and packaging population structure inferences across K

(2015) Naama M. Kopelman et al.   Molecular Ecology Resources

Stable recombination hotspots in birds

(2015) S. Singhal et al.   SCIENCE

A new FST-based method to uncover local adaptation using environmental variables

(2015) Pierre de Villemereuil et al.   Methods in Ecology and Evolution

Mitochondrial uncoupling as a regulator of life-history trajectories in birds: an experimental study in the zebra finch

(2014) A. Stier et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

A high-density linkage map enables a second-generation collared flycatcher genome assembly and reveals the patterns of avian recombination rate variation and chromosomal evolution

(2014) Takeshi Kawakami et al.   MOLECULAR ECOLOGY

Reanalysis suggests that genomic islands of speciation are due to reduced diversity, not reduced gene flow

(2014) Tami E. Cruickshank et al.   MOLECULAR ECOLOGY

Genomics and the origin of species

(2014) Ole Seehausen et al.   NATURE REVIEWS GENETICS

Ensembl 2015

(2014) Fiona Cunningham et al.   NUCLEIC ACIDS RESEARCH

The costs of being male: are there sex-specific effects of uniparental mitochondrial inheritance?

(2014) M. Beekman et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Mitonuclear interactions: evolutionary consequences over multiple biological scales

(2014) J. N. Wolff et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The LYR protein subunit NB4M/NDUFA6 of mitochondrial complex I anchors an acyl carrier protein and is essential for catalytic activity

(2014) H. Angerer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Stick Insect Genomes Reveal Natural Selection's Role in Parallel Speciation

(2014) V. Soria-Carrasco et al.   SCIENCE

Cytonuclear Genomic Interactions and Hybrid Breakdown

(2013) Ronald S. Burton et al.   Annual Review of Ecology Evolution and Systematics

From evolutionary bystander to master manipulator: the emerging roles for the mitochondrial genome as a modulator of nuclear gene expression

(2013) Martin P Horan et al.   EUROPEAN JOURNAL OF HUMAN GENETICS

PERCHED AT THE MITO-NUCLEAR CROSSROADS: DIVERGENT MITOCHONDRIAL LINEAGES CORRELATE WITH ENVIRONMENT IN THE FACE OF ONGOING NUCLEAR GENE FLOW IN AN AUSTRALIAN BIRD

(2013) Alexandra Pavlova et al.   EVOLUTION

Mitochondrial DNA: more than an evolutionary bystander

(2013) J. William O. Ballard et al.   FUNCTIONAL ECOLOGY

Pleiotropic Effects of a Mitochondrial–Nuclear Incompatibility Depend upon the Accelerating Effect of Temperature in Drosophila

(2013) Luke A. Hoekstra et al.   GENETICS

Genomic rearrangements and the evolution of clusters of locally adaptive loci

(2013) S. Yeaman   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The mitonuclear compatibility hypothesis of sexual selection

(2013) G. E. Hill et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

diveRsity: AnRpackage for the estimation and exploration of population genetics parameters and their associated errors

(2013) Kevin Keenan et al.   Methods in Ecology and Evolution

An Incompatibility between a Mitochondrial tRNA and Its Nuclear-Encoded tRNA Synthetase Compromises Development and Fitness in Drosophila

(2013) Colin D. Meiklejohn et al.   PLoS Genetics

Evolutionary forces shaping genomic islands of population differentiation in humans

(2012) Tamara Hofer et al.   BMC GENOMICS

Fine-scale effects of habitat loss and fragmentation despite large-scale gene flow for some regionally declining woodland bird species

(2012) Katherine A. Harrisson et al.   LANDSCAPE ECOLOGY

A disproportionate role for mtDNA in Dobzhansky-Muller incompatibilities?

(2012) Ronald S. Burton et al.   MOLECULAR ECOLOGY

The genomic landscape of species divergence in Ficedula flycatchers

(2012) Hans Ellegren et al.   NATURE

The genomic basis of adaptive evolution in threespine sticklebacks

(2012) Felicity C. Jones et al.   NATURE

Mitochondrial-nuclear co-evolution and its effects on OXPHOS activity and regulation

(2011) Dan Bar-Yaacov et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Respiratory chain complex I deficiency due to NDUFA12 mutations as a new cause of Leigh syndrome

(2011) E. Ostergaard et al.   JOURNAL OF MEDICAL GENETICS

Nucleotide diversity and linkage disequilibrium in Populus nigra cinnamyl alcohol dehydrogenase (CAD4) gene

(2011) Fabio Marroni et al.   Tree Genetics & Genomes

Mutation of the Mitochondrial Tyrosyl-tRNA Synthetase Gene, YARS2, Causes Myopathy, Lactic Acidosis, and Sideroblastic Anemia—MLASA Syndrome

(2010) Lisa G. Riley et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Evolution of Respiratory Complex I

(2010) Chui-ying Yip et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Genomic islandsofspeciation or genomic islandsandspeciation?

(2010) THOMAS L. TURNER et al.   MOLECULAR ECOLOGY

The genome of a songbird

(2010) Wesley C. Warren et al.   NATURE

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Islands of speciation or mirages in the desert? Examining the role of restricted recombination in maintaining species

(2009) M A F Noor et al.   HEREDITY

Divergent selection and heterogeneous genomic divergence

(2009) PATRIK NOSIL et al.   MOLECULAR ECOLOGY

adegenet: a R package for the multivariate analysis of genetic markers

(2008) Thibaut Jombart   BIOINFORMATICS

Ecological selection maintains cytonuclear incompatibilities in hybridizing sunflowers

(2008) Julianno B. M. Sambatti et al.   ECOLOGY LETTERS

Speciation through evolution of sex-linked genes

(2008) A Qvarnström et al.   HEREDITY

Evolutionary implications of non-neutral mitochondrial genetic variation

(2008) D DOWLING et al.   TRENDS IN ECOLOGY & EVOLUTION