Thermal regime and host clade, rather than geography, drive Symbiodinium and bacterial assemblages in the scleractinian coral Pocillopora damicornis sensu lato

Tenacious D:Symbiodiniumin clade D remain in reef corals at both high and low temperature extremes despite impairment

(2017) Rachel N. Silverstein et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Reevaluating species number, distribution and endemism of the coral genus Pocillopora Lamarck, 1816 using species delimitation methods and microsatellites

(2017) P. Gélin et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Global warming and recurrent mass bleaching of corals

(2017) Terry P. Hughes et al.   NATURE

Defining the Core Microbiome in Corals’ Microbial Soup

(2017) Alejandra Hernandez-Agreda et al.   TRENDS IN MICROBIOLOGY

Bacterial community dynamics are linked to patterns of coral heat tolerance

(2017) Maren Ziegler et al.   Nature Communications

An updated assessment ofSymbiodiniumspp. that associate with common scleractinian corals from Moorea (French Polynesia) reveals high diversity among background symbionts and a novel finding of clade B

(2017) Héloïse Rouzé et al.   PeerJ

Optimization of DNA extraction for advancing coral microbiota investigations

(2017) Laura Weber et al.   Microbiome

Superclone Expansion, Long-Distance Clonal Dispersal and Local Genetic Structuring in the Coral Pocillopora damicornis Type β in Reunion Island, South Western Indian Ocean

(2017) Pauline Gélin et al.   PLoS One

Endozoicomonas genomes reveal functional adaptation and plasticity in bacterial strains symbiotically associated with diverse marine hosts

(2017) Matthew J. Neave et al.   Scientific Reports

Diversity and function of prevalent symbiotic marine bacteria in the genus Endozoicomonas

(2016) Matthew J. Neave et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Differential specificity between closely related corals and abundant Endozoicomonas endosymbionts across global scales

(2016) Matthew J Neave et al.   ISME Journal

Exploring the Symbiodinium rare biosphere provides evidence for symbiont switching in reef-building corals

(2016) Nadine M Boulotte et al.   ISME Journal

Symbiodiniumclades A and D differentially predisposeAcropora cythereato disease andVibriospp. colonization

(2016) Héloïse Rouzé et al.   Ecology and Evolution

Epimicrobiota Associated with the Decay and Recovery of Orbicella Corals Exhibiting Dark Spot Syndrome

(2016) Julie L. Meyer et al.   Frontiers in Microbiology

Characterisation of an atypical manifestation of black band disease onPorites luteain the Western Indian Ocean

(2016) Mathieu Séré et al.   PeerJ

VSEARCH: a versatile open source tool for metagenomics

(2016) Torbjørn Rognes et al.   PeerJ

Getting the Hologenome Concept Right: an Eco-Evolutionary Framework for Hosts and Their Microbiomes

(2016) Kevin R. Theis et al.   mSystems

The coral core microbiome identifies rare bacterial taxa as ubiquitous endosymbionts

(2015) Tracy D Ainsworth et al.   ISME Journal

Habitat-specific environmental conditions primarily control the microbiomes of the coral Seriatopora hystrix

(2015) Olga Pantos et al.   ISME Journal

Coral-the world's most diverse symbiotic ecosystem

(2015) Linda L. Blackall et al.   MOLECULAR ECOLOGY

Trans-Pacific RAD-Seq population genomics confirms introgressive hybridization in Eastern Pacific Pocillopora corals

(2015) David J. Combosch et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Host Biology in Light of the Microbiome: Ten Principles of Holobionts and Hologenomes

(2015) Seth R. Bordenstein et al.   PLOS BIOLOGY

Cold temperature stress and predation effects on corals: their possible roles in structuring a nonreefal coral community

(2014) Ryan Ho Leung Tsang et al.   CORAL REEFS

Hemolymph microbiome of Pacific oysters in response to temperature, temperature stress and infection

(2014) Ana Lokmer et al.   ISME Journal

ExploringSymbiodiniumdiversity and host specificity inAcroporacorals from geographical extremes of Western Australia with 454 amplicon pyrosequencing

(2014) L. Thomas et al.   MOLECULAR ECOLOGY

Deep-Sequencing Method for Quantifying Background Abundances of Symbiodinium Types: Exploring the Rare Symbiodinium Biosphere in Reef-Building Corals

(2014) Kate M. Quigley et al.   PLoS One

With eyes wide open: a revision of species within and closely related to thePocillopora damicornisspecies complex (Scleractinia; Pocilloporidae) using morphology and genetics

(2014) Sebastian Schmidt-Roach et al.   ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Weakening of the stratospheric polar vortex by Arctic sea-ice loss

(2014) Baek-Min Kim et al.   Nature Communications

Bacterial dynamics within the mucus, tissue and skeleton of the coral Porites lutea during different seasons

(2014) Jie Li et al.   Scientific Reports

Swarm: robust and fast clustering method for amplicon-based studies

(2014) Frédéric Mahé et al.   PeerJ

Marine microbial symbiosis heats up: the phylogenetic and functional response of a sponge holobiont to thermal stress

(2013) Lu Fan et al.   ISME Journal

Coral reef invertebrate microbiomes correlate with the presence of photosymbionts

(2013) David G Bourne et al.   ISME Journal

Blind to morphology: genetics identifies several widespread ecologically common species and few endemics among Indo-Pacific cauliflower corals (Pocillopora, Scleractinia)

(2013) Jorge H. Pinzón et al.   JOURNAL OF BIOGEOGRAPHY

Genetic diversity, clonality and connectivity in the scleractinian coral Pocillopora damicornis: a multi-scale analysis in an insular, fragmented reef system

(2013) Mehdi Adjeroud et al.   MARINE BIOLOGY

Corals from the Persian/Arabian Gulf as models for thermotolerant reef-builders: Prevalence of clade C3 Symbiodinium, host fluorescence and ex situ temperature tolerance

(2013) B. Hume et al.   MARINE POLLUTION BULLETIN

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Animals in a bacterial world, a new imperative for the life sciences

(2013) Margaret McFall-Ngai et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bacterial Associates of Two Caribbean Coral Species Reveal Species-Specific Distribution and Geographic Variability

(2012) Kathleen M. Morrow et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Ciliate and bacterial communities associated with White Syndrome and Brown Band Disease in reef-building corals

(2012) Michael Sweet et al.   ENVIRONMENTAL MICROBIOLOGY

The photokinetics of thermo-tolerance inSymbiodinium

(2012) Alison Jones et al.   Marine Ecology-An Evolutionary Perspective

Cell Biology of Cnidarian-Dinoflagellate Symbiosis

(2012) S. K. Davy et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies

(2012) Anna Klindworth et al.   NUCLEIC ACIDS RESEARCH

Endosymbiotic flexibility associates with environmental sensitivity in scleractinian corals

(2012) H. M. Putnam et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Bacterial assemblages shifts from healthy to yellow band disease states in the dominant reef coralMontastraea faveolata

(2012) Aldo Cróquer et al.   Environmental Microbiology Reports

Cold induces acute stress but heat is ultimately more deleterious for the reef-building coral Acropora yongei

(2012) Melissa S. Roth et al.   Scientific Reports

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Beyond the Venn diagram: the hunt for a core microbiome

(2011) Ashley Shade et al.   ENVIRONMENTAL MICROBIOLOGY

Revisiting the winners and the losers a decade after coral bleaching

(2011) R van Woesik et al.   MARINE ECOLOGY PROGRESS SERIES

Metaorganisms as the new frontier

(2011) Thomas C.G. Bosch et al.   ZOOLOGY

The dynamics of microbial partnerships in the coral Isopora palifera

(2010) Chung-Pin Chen et al.   ISME Journal

Bacterial Community Associated with Healthy and Diseased Reef Coral Mussismilia hispida from Eastern Brazil

(2010) Alinne Pereira de Castro et al.   MICROBIAL ECOLOGY

Species delimitation of common reef corals in the genus Pocillopora using nucleotide sequence phylogenies, population genetics and symbiosis ecology

(2010) JORGE H. PINZÓN et al.   MOLECULAR ECOLOGY

Coral host transcriptomic states are correlated withSymbiodiniumgenotypes

(2010) M. K. DeSALVO et al.   MOLECULAR ECOLOGY

Do the organic sulfur compounds DMSP and DMS drive coral microbial associations?

(2010) Jean-Baptiste Raina et al.   TRENDS IN MICROBIOLOGY

Systematic and Biogeographical Patterns in the Reproductive Biology of Scleractinian Corals

(2009) Andrew H. Baird et al.   Annual Review of Ecology Evolution and Systematics

Diversities of coral-associated bacteria differ with location, but not species, for three acroporid corals on the Great Barrier Reef

(2009) Raechel A. Littman et al.   FEMS MICROBIOLOGY ECOLOGY

Successional changes in bacterial communities during the development of black band disease on the reef coral, Montipora hispida

(2009) Yui Sato et al.   ISME Journal

The production of sexual and asexual larvae within single broods of the scleractinian coral, Pocillopora damicornis

(2009) Shang-Ru Yeoh et al.   MARINE BIOLOGY

Interspecific hybridization and restricted trans-Pacific gene flow in the Tropical Eastern Pacific Pocillopora

(2008) DAVID J. COMBOSCH et al.   MOLECULAR ECOLOGY

A community change in the algal endosymbionts of a scleractinian coral following a natural bleaching event: field evidence of acclimatization

(2008) A.M Jones et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

One-Third of Reef-Building Corals Face Elevated Extinction Risk from Climate Change and Local Impacts

(2008) K. E. Carpenter et al.   SCIENCE