Modify the Histone to Win the Battle: Chromatin Dynamics in Plant–Pathogen Interactions

The Histone Modification Code in the Pathogenesis of Autoimmune Diseases

(2017) Yasuto Araki et al.   MEDIATORS OF INFLAMMATION

Lysine acetylome profiling uncovers novel histone deacetylase substrate proteins in Arabidopsis

(2017) Markus Hartl et al.   Molecular Systems Biology

Mechanisms of action and regulation of ATP-dependent chromatin-remodelling complexes

(2017) Cedric R. Clapier et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

The Arabidopsis Elongator complex is required for nonhost resistance against the bacterial pathogens Xanthomonas citri subsp. citri and Pseudomonas syringae pv. phaseolicola NPS3121

(2017) Chuanfu An et al.   NEW PHYTOLOGIST

The Arabidopsis Chromatin-Remodeling Factor CHR5 Regulates Plant Immune Responses and Nucleosome Occupancy

(2017) Baohong Zou et al.   PLANT AND CELL PHYSIOLOGY

JMJ27, an Arabidopsis H3K9 histone demethylase, modulates defense against Pseudomonas syringae and flowering time

(2017) Aditya Dutta et al.   PLANT JOURNAL

EIN2 mediates direct regulation of histone acetylation in the ethylene response

(2017) Fan Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Lack of the COMPASS Component Ccl1 Reduces H3K4 Trimethylation Levels and Affects Transcription of Secondary Metabolite Genes in Two Plant–Pathogenic Fusarium Species

(2017) Lena Studt et al.   Frontiers in Microbiology

Transgenerational Defense Priming for Crop Protection against Plant Pathogens: A Hypothesis

(2017) Gabriela Ramírez-Carrasco et al.   Frontiers in Plant Science

Chromatin-Based Epigenetic Regulation of Plant Abiotic Stress Response

(2016) Garima Pandey et al.   CURRENT GENOMICS

Tug of war: adding and removing histone lysine methylation in Arabidopsis

(2016) Jun Xiao et al.   CURRENT OPINION IN PLANT BIOLOGY

Arabidopsis RNA Polymerases IV and V Are Required To Establish H3K9 Methylation, but Not Cytosine Methylation, on Geminivirus Chromatin

(2016) Jamie N. Jackel et al.   JOURNAL OF VIROLOGY

SWR1 Chromatin-Remodeling Complex Subunits and H2A.Z Have Non-overlapping Functions in Immunity and Gene Regulation in Arabidopsis

(2016) Souha Berriri et al.   Molecular Plant

A Direct Link between Abscisic Acid Sensing and the Chromatin-Remodeling ATPase BRAHMA via Core ABA Signaling Pathway Components

(2016) Marta Peirats-Llobet et al.   Molecular Plant

Global regulation of plant immunity by histone lysine methyl transferases

(2016) Sanghun Lee et al.   PLANT CELL

The Arabidopsis hnRNP-Q Protein LIF2 and the PRC1 Subunit LHP1 Function in Concert to Regulate the Transcription of Stress-Responsive Genes

(2016) Anne M. Molitor et al.   PLANT CELL

Nitric Oxide Modulates Histone Acetylation at Stress Genes by Inhibition of Histone Deacetylases

(2016) Alexander Mengel et al.   PLANT PHYSIOLOGY

Arabidopsis Flower and Embryo Developmental Genes are Repressed in Seedlings by Different Combinations of Polycomb Group Proteins in Association with Distinct Sets of Cis-regulatory Elements

(2016) Hua Wang et al.   PLoS Genetics

Mighty Dwarfs: Arabidopsis Autoimmune Mutants and Their Usages in Genetic Dissection of Plant Immunity

(2016) Rowan van Wersch et al.   Frontiers in Plant Science

LHP1 Regulates H3K27me3 Spreading and Shapes the Three-Dimensional Conformation of the Arabidopsis Genome

(2016) Alaguraj Veluchamy et al.   PLoS One

Tomato histone H2B monoubiquitination enzymes SlHUB1 and SlHUB2 contribute to disease resistance against Botrytis cinerea through modulating the balance between SA- and JA/ET-mediated signaling pathways

(2015) Yafen Zhang et al.   BMC PLANT BIOLOGY

JMJ704 positively regulates rice defense response against Xanthomonas oryzae pv. oryzae infection via reducing H3K4me2/3 associated with negative disease resistance regulators

(2015) Yuxuan Hou et al.   BMC PLANT BIOLOGY

A Receptor Pair with an Integrated Decoy Converts Pathogen Disabling of Transcription Factors to Immunity

(2015) Clémentine Le Roux et al.   CELL

BRHIS1 suppresses rice innate immunity through binding to monoubiquitinated H2A and H2B variants

(2015) X. Li et al.   EMBO REPORTS

Beyond receptors and signaling: epigenetic factors in the regulation of innate immunity

(2015) Stuti Mehta et al.   IMMUNOLOGY AND CELL BIOLOGY

The nexus between growth and defence signalling: auxin and cytokinin modulate plant immune response pathways

(2015) Muhammad Naseem et al.   JOURNAL OF EXPERIMENTAL BOTANY

Interplay between reactive oxygen species and hormones in the control of plant development and stress tolerance

(2015) Xiao-Jian Xia et al.   JOURNAL OF EXPERIMENTAL BOTANY

Host Versus Nonhost Resistance: Distinct Wars with Similar Arsenals

(2015) Upinder S. Gill et al.   PHYTOPATHOLOGY

The Chromatin Remodeler SPLAYED Negatively Regulates SNC1-Mediated Immunity

(2015) Kaeli C.M. Johnson et al.   PLANT AND CELL PHYSIOLOGY

Chromodomain, Helicase and DNA-binding CHD1 protein, CHR5, are involved in establishing active chromatin state of seed maturation genes

(2015) Yuan Shen et al.   PLANT BIOTECHNOLOGY JOURNAL

Transcriptional Dynamics Driving MAMP-Triggered Immunity and Pathogen Effector-Mediated Immunosuppression in Arabidopsis Leaves Following Infection withPseudomonas syringaepv tomato DC3000

(2015) Laura A. Lewis et al.   PLANT CELL

Arabidopsis Elongator subunit 2 positively contributes to resistance to the necrotrophic fungal pathogensBotrytis cinereaandAlternaria brassicicola

(2015) Chenggang Wang et al.   PLANT JOURNAL

Geminivirus-encoded TrAP suppressor inhibits the histone methyltransferase SUVH4/KYP to counter host defense

(2015) Claudia Castillo-González et al.   eLife

Chromatin changes in response to drought, salinity, heat, and cold stresses in plants

(2015) Jong-Myong Kim et al.   Frontiers in Plant Science

Chromatin versus pathogens: the function of epigenetics in plant immunity

(2015) Bo Ding et al.   Frontiers in Plant Science

PFP1 , a Gene Encoding an Epc-N Domain-Containing Protein, Is Essential for Pathogenicity of the Barley Pathogen Rhynchosporium commune

(2014) Sylvia Siersleben et al.   EUKARYOTIC CELL

Arabidopsis FLOWERING LOCUS D influences systemic-acquired-resistance-induced expression and histone modifications of WRKY genes

(2014) Vijayata Singh et al.   JOURNAL OF BIOSCIENCES

Connecting Growth and Defense: The Emerging Roles of Brassinosteroids and Gibberellins in Plant Innate Immunity

(2014) Lieselotte De Bruyne et al.   Molecular Plant

Transcriptional enhancers: from properties to genome-wide predictions

(2014) Daria Shlyueva et al.   NATURE REVIEWS GENETICS

Environmental History Modulates Arabidopsis Pattern-Triggered Immunity in a HISTONE ACETYLTRANSFERASE1-Dependent Manner

(2014) P. Singh et al.   PLANT CELL

Suppress to Survive—Implication of Plant Viruses in PTGS

(2014) Przemysław Wieczorek et al.   PLANT MOLECULAR BIOLOGY REPORTER

Epigenetics: Beyond Chromatin Modifications and Complex Genetic Regulation

(2014) S. R. Eichten et al.   PLANT PHYSIOLOGY

Histone H2B Monoubiquitination Is Involved in Regulating the Dynamics of Microtubules during the Defense Response to Verticillium dahliae Toxins in Arabidopsis

(2014) M. Hu et al.   PLANT PHYSIOLOGY

Monoubiquitination of Histone 2B at the Disease Resistance Gene Locus Regulates Its Expression and Impacts Immune Responses in Arabidopsis

(2014) B. Zou et al.   PLANT PHYSIOLOGY

The hnRNP-Q Protein LIF2 Participates in the Plant Immune Response

(2014) Clémentine Le Roux et al.   PLoS One

MAPK Cascades in Plant Disease Resistance Signaling

(2013) Xiangzong Meng et al.   Annual Review of Phytopathology

Two Histone Deacetylases, FfHda1 and FfHda2, Are Important for Fusarium fujikuroi Secondary Metabolism and Virulence

(2013) L. Studt et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Elongator subunit 3 positively regulates plant immunity through its histone acetyltransferase and radical S-adenosylmethionine domains

(2013) Christopher T DeFraia et al.   BMC PLANT BIOLOGY

Arabidopsis thaliana FLOWERING LOCUS DIs Required for Systemic Acquired Resistance

(2013) Vijayata Singh et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Geminivirus Rep protein interferes with the plant DNA methylation machinery and suppresses transcriptional gene silencing

(2013) Edgar Rodríguez-Negrete et al.   NEW PHYTOLOGIST

The Arabidopsis Elongator Complex Subunit2 Epigenetically Regulates Plant Immune Responses

(2013) Y. Wang et al.   PLANT CELL

Jumonji C Domain Protein JMJ705-Mediated Removal of Histone H3 Lysine 27 Trimethylation Is Involved in Defense-Related Gene Activation in Rice

(2013) T. Li et al.   PLANT CELL

Histone deacetylases and their functions in plants

(2013) Xujun Ma et al.   PLANT CELL REPORTS

A chemical genetic approach demonstrates that MPK3/MPK6 activation and NADPH oxidase-mediated oxidative burst are two independent signaling events in plant immunity

(2013) Juan Xu et al.   PLANT JOURNAL

Regulation of Transcription of Nucleotide-Binding Leucine-Rich Repeat-Encoding Genes SNC1 and RPP4 via H3K4 Trimethylation

(2013) S. Xia et al.   PLANT PHYSIOLOGY

TAL effectors: highly adaptable phytobacterial virulence factors and readily engineered DNA-targeting proteins

(2013) Erin L. Doyle et al.   TRENDS IN CELL BIOLOGY

The Fusarium graminearum Histone H3 K27 Methyltransferase KMT6 Regulates Development and Expression of Secondary Metabolite Gene Clusters

(2013) Lanelle R. Connolly et al.   PLoS Genetics

Nitric oxide and phytohormone interactions: current status and perspectives

(2013) Luciano Freschi   Frontiers in Plant Science

TALENs: a widely applicable technology for targeted genome editing

(2012) J. Keith Joung et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

The SWI2/SNF2 Chromatin Remodeling ATPase BRAHMA Represses Abscisic Acid Responses in the Absence of the Stress Stimulus in Arabidopsis

(2012) S.-K. Han et al.   PLANT CELL

HDT701, a Histone H4 Deacetylase, Negatively Regulates Plant Innate Immunity by Modulating Histone H4 Acetylation of Defense-Related Genes in Rice

(2012) B. Ding et al.   PLANT CELL

HDA19 is required for the repression of salicylic acid biosynthesis and salicylic acid-mediated defense responses in Arabidopsis

(2012) Sun-Mee Choi et al.   PLANT JOURNAL

Arabidopsis WRKY33 Is a Key Transcriptional Regulator of Hormonal and Metabolic Responses toward Botrytis cinerea Infection

(2012) R. P. Birkenbihl et al.   PLANT PHYSIOLOGY

MAP Kinase Cascades in Arabidopsis Innate Immunity

(2012) Magnus W. Rasmussen et al.   Frontiers in Plant Science

Chromatin modifications and remodeling in plant abiotic stress responses

(2011) Ming Luo et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Identification of 67 Histone Marks and Histone Lysine Crotonylation as a New Type of Histone Modification

(2011) Minjia Tan et al.   CELL

TAL effectors are remote controls for gene activation

(2011) Heidi Scholze et al.   CURRENT OPINION IN MICROBIOLOGY

Transcription of Genes in the Biosynthetic Pathway for Fumonisin Mycotoxins Is Epigenetically and Differentially Regulated in the Fungal Maize Pathogen Fusarium verticillioides

(2011) I. Visentin et al.   EUKARYOTIC CELL

Regulation of disease-responsive genes mediated by epigenetic factors: interaction of Arabidopsis-Pseudomonas

(2011) CLELIA DE-LA-PEÑA et al.   MOLECULAR PLANT PATHOLOGY

BSCTV C2 Attenuates the Degradation of SAMDC1 to Suppress DNA Methylation-Mediated Gene Silencing inArabidopsis

(2011) Zhonghui Zhang et al.   PLANT CELL

TheXanthomonasType III Effector XopD Targets theArabidopsisTranscription Factor MYB30 to Suppress Plant Defense

(2011) Joanne Canonne et al.   PLANT CELL

Descendants of Primed Arabidopsis Plants Exhibit Resistance to Biotic Stress

(2011) A. Slaughter et al.   PLANT PHYSIOLOGY

Next-Generation Systemic Acquired Resistance

(2011) E. Luna et al.   PLANT PHYSIOLOGY

Herbivory in the Previous Generation Primes Plants for Enhanced Insect Resistance

(2011) S. Rasmann et al.   PLANT PHYSIOLOGY

Control of Flowering and Cell Fate by LIF2, an RNA Binding Partner of the Polycomb Complex Component LHP1

(2011) David Latrasse et al.   PLoS One

Expanded functions for a family of plant intracellular immune receptors beyond specific recognition of pathogen effectors

(2011) V. Bonardi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Insights into Auxin Signaling in Plant?Pathogen Interactions

(2011) Jing Fu et al.   Frontiers in Plant Science

Histone Methylation in Higher Plants

(2010) Chunyan Liu et al.   Annual Review of Plant Biology

Dynamic Changes in Genome-Wide Histone H3 Lysine 4 Methylation Patterns in Response to Dehydration Stress in Arabidopsis thaliana

(2010) Karin van Dijk et al.   BMC PLANT BIOLOGY

TheHDF1Histone Deacetylase Gene Is Important for Conidiation, Sexual Reproduction, and Pathogenesis inFusarium graminearum

(2010) Yimin Li et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Arabidopsis Putative Deacetylase AtSRT2 Regulates Basal Defense by Suppressing PAD4, EDS5 and SID2 Expression

(2010) Chunzheng Wang et al.   PLANT AND CELL PHYSIOLOGY

The Tig1 Histone Deacetylase Complex Regulates Infectious Growth in the Rice Blast Fungus Magnaporthe oryzae

(2010) S.-L. Ding et al.   PLANT CELL

Elongator subunit 2 is an accelerator of immune responses in Arabidopsis thaliana

(2010) Christopher T. DeFraia et al.   PLANT JOURNAL

Genome-wide profiling of histone H3 lysine 9 acetylation and dimethylation in Arabidopsis reveals correlation between multiple histone marks and gene expression

(2010) Junli Zhou et al.   PLANT MOLECULAR BIOLOGY

Regulation of the Expression of Plant Resistance Gene SNC1 by a Protein with a Conserved BAT2 Domain

(2010) Y. Li et al.   PLANT PHYSIOLOGY

Arabidopsis Histone Methyltransferase SET DOMAIN GROUP8 Mediates Induction of the Jasmonate/Ethylene Pathway Genes in Plant Defense Response to Necrotrophic Fungi

(2010) A. Berr et al.   PLANT PHYSIOLOGY

Proteomic analyses identify a diverse array of nuclear processes affected by small ubiquitin-like modifier conjugation in Arabidopsis

(2010) M. J. Miller et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Rice histone deacetylase genes display specific expression patterns and developmental functions

(2009) Yongfeng Hu et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Transducin Beta-Like GeneFTL1Is Essential for Pathogenesis inFusarium graminearum

(2009) Shengli Ding et al.   EUKARYOTIC CELL

Gene Duplication and Hypermutation of the Pathogen Resistance Gene SNC1 in the Arabidopsis bal Variant

(2009) Hankuil Yi et al.   GENETICS

Biosynthesis and Role in Virulence of the Histone Deacetylase Inhibitor Depudecin fromAlternaria brassicicola

(2009) Wanessa D. Wight et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Networking by small-molecule hormones in plant immunity

(2009) Corné M J Pieterse et al.   Nature Chemical Biology

HISTONE MONOUBIQUITINATION1 Interacts with a Subunit of the Mediator Complex and Regulates Defense against Necrotrophic Fungal Pathogens in Arabidopsis

(2009) R. Dhawan et al.   PLANT CELL

Mutations in theArabidopsis SWC6gene, encoding a component of the SWR1 chromatin remodelling complex, accelerate flowering time and alter leaf and flower development

(2008) Ana Lázaro et al.   JOURNAL OF EXPERIMENTAL BOTANY

HDA6 is required for jasmonate response, senescence and flowering in Arabidopsis

(2008) K. Wu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Viral Genome Methylation as an Epigenetic Defense against Geminiviruses

(2008) P. Raja et al.   JOURNAL OF VIROLOGY

Histone Ubiquitination: Triggering Gene Activity

(2008) Vikki M. Weake et al.   MOLECULAR CELL

Alterations of Lysine Modifications on the Histone H3 N-Tail under Drought Stress Conditions in Arabidopsis thaliana

(2008) Jong-Myong Kim et al.   PLANT AND CELL PHYSIOLOGY

Histone H2B Monoubiquitination in the Chromatin of FLOWERING LOCUS C Regulates Flowering Time in Arabidopsis

(2008) Y. Cao et al.   PLANT CELL

Arabidopsis WRKY38 and WRKY62 Transcription Factors Interact with Histone Deacetylase 19 in Basal Defense

(2008) K.-C. Kim et al.   PLANT CELL

Snf2 proteins in plants: gene silencing and beyond

(2008) Lukasz Knizewski et al.   TRENDS IN PLANT SCIENCE

The Chromatin Remodeler SPLAYED Regulates Specific Stress Signaling Pathways

(2008) Justin W. Walley et al.   PLoS Pathogens