EIN2 mediates direct regulation of histone acetylation in the ethylene response

Cryptochromes Interact Directly with PIFs to Control Plant Growth in Limiting Blue Light

(2016) Ullas V. Pedmale et al.   CELL

Histone deacetylation-mediated cellular dedifferentiation in Arabidopsis

(2016) Kyounghee Lee et al.   JOURNAL OF PLANT PHYSIOLOGY

Epigenetic Modifications and Plant Hormone Action

(2016) Chizuko Yamamuro et al.   Molecular Plant

EIN2-dependent regulation of acetylation of histone H3K14 and non-canonical histone H3K23 in ethylene signalling

(2016) Fan Zhang et al.   Nature Communications

Phosphorylation of CBP20 Links MicroRNA to Root Growth in the Ethylene Response

(2016) Fan Zhang et al.   PLoS Genetics

EIN2-Directed Translational Regulation of Ethylene Signaling in Arabidopsis

(2015) Wenyang Li et al.   CELL

Gene-Specific Translation Regulation Mediated by the Hormone-Signaling Molecule EIN2

(2015) Catharina Merchante et al.   CELL

Epigenome editing by a CRISPR-Cas9-based acetyltransferase activates genes from promoters and enhancers

(2015) Isaac B Hilton et al.   NATURE BIOTECHNOLOGY

Transcriptome-Wide Identification of RNA Targets of Arabidopsis SERINE/ARGININE-RICH45 Uncovers the Unexpected Roles of This RNA Binding Protein in RNA Processing

(2015) Denghui Xing et al.   PLANT CELL

Mechanistic Insights in Ethylene Perception and Signal Transduction

(2015) Chuanli Ju et al.   PLANT PHYSIOLOGY

Auxin-regulated chromatin switch directs acquisition of flower primordium founder fate

(2015) Miin-Feng Wu et al.   eLife

Multiple Mechanistically Distinct Modes of Endocannabinoid Mobilization at Central Amygdala Glutamatergic Synapses

(2014) Teniel S. Ramikie et al.   NEURON

deepTools: a flexible platform for exploring deep-sequencing data

(2014) Fidel Ramírez et al.   NUCLEIC ACIDS RESEARCH

RNA-Guided Genome Editing in Plants Using a CRISPR–Cas System

(2013) Kabin Xie et al.   Molecular Plant

ArabidopsisPaired Amphipathic Helix Proteins SNL1 and SNL2 Redundantly Regulate Primary Seed Dormancy via Abscisic Acid–Ethylene Antagonism Mediated by Histone Deacetylation

(2013) Zhi Wang et al.   PLANT CELL

Histone Deacetylase Complex1 Expression Level Titrates Plant Growth and Abscisic Acid Sensitivity in Arabidopsis

(2013) G. Perrella et al.   PLANT CELL

Temporal transcriptional response to ethylene gas drives growth hormone cross-regulation in Arabidopsis

(2013) Katherine Noelani Chang et al.   eLife

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

Histone acetyltransferases in rice (Oryza sativa L.): phylogenetic analysis, subcellular localization and expression

(2012) Xia Liu et al.   BMC PLANT BIOLOGY

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

A Triple Helix-Loop-Helix/Basic Helix-Loop-Helix Cascade Controls Cell Elongation Downstream of Multiple Hormonal and Environmental Signaling Pathways in Arabidopsis

(2012) M.-Y. Bai et al.   PLANT CELL

CTR1 phosphorylates the central regulator EIN2 to control ethylene hormone signaling from the ER membrane to the nucleus in Arabidopsis

(2012) C. Ju et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Processing and Subcellular Trafficking of ER-Tethered EIN2 Control Response to Ethylene Gas

(2012) H. Qiao et al.   SCIENCE

A Programmable Dual-RNA-Guided DNA Endonuclease in Adaptive Bacterial Immunity

(2012) M. Jinek et al.   SCIENCE

Making sense of low oxygen sensing

(2012) Julia Bailey-Serres et al.   TRENDS IN PLANT SCIENCE

Integrative genomics viewer

(2011) James T Robinson et al.   NATURE BIOTECHNOLOGY

A computational pipeline for comparative ChIP-seq analyses

(2011) Anaïs F Bardet et al.   Nature Protocols

The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools

(2011) Philippe Lamesch et al.   NUCLEIC ACIDS RESEARCH

Role of HD2 genes in seed germination and early seedling growth in Arabidopsis

(2011) Adam Colville et al.   PLANT CELL REPORTS

Derepression of ethylene-stabilized transcription factors (EIN3/EIL1) mediates jasmonate and ethylene signaling synergy in Arabidopsis

(2011) Z. Zhu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The epigenetic involvement in plant hormone signaling

(2010) YuXian Zhu   CHINESE SCIENCE BULLETIN

Molecular Association of theArabidopsisETR1 Ethylene Receptor and a Regulator of Ethylene Signaling, RTE1

(2010) Chun-Hai Dong et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

CEAS: cis-regulatory element annotation system

(2009) Hyunjin Shin et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Interplay between ethylene, ETP1/ETP2 F-box proteins, and degradation of EIN2 triggers ethylene responses in Arabidopsis

(2009) H. Qiao et al.   GENES & DEVELOPMENT

HDA6 is required for jasmonate response, senescence and flowering in Arabidopsis

(2008) K. Wu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Model-based Analysis of ChIP-Seq (MACS)

(2008) Yong Zhang et al.   GENOME BIOLOGY