Similarities in temperature-dependent gene expression plasticity across timescales in threespine stickleback (Gasterosteus aculeatus )

Transcriptional mechanisms underlying life-history responses to climate change in the three-spined stickleback

(2017) Sin-Yeon Kim et al.   Evolutionary Applications

Transgenerational plasticity and climate change experiments: Where do we go from here?

(2017) Jennifer M. Donelson et al.   GLOBAL CHANGE BIOLOGY

Epigenetics in natural animal populations

(2017) J. Hu et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

The fallacy of the average: on the ubiquity, utility and continuing novelty of Jensen's inequality

(2017) Mark Denny   JOURNAL OF EXPERIMENTAL BIOLOGY

Genome-Wide DNA Methylation Profiling Reveals Epigenetic Adaptation of Stickleback to Marine and Freshwater Conditions

(2017) Artem V. Artemov et al.   MOLECULAR BIOLOGY AND EVOLUTION

Mitochondrial genotype and phenotypic plasticity of gene expression in response to cold acclimation in killifish

(2017) Timothy M. Healy et al.   MOLECULAR ECOLOGY

Rapid response to changing environments during biological invasions: DNA methylation perspectives

(2017) Xuena Huang et al.   MOLECULAR ECOLOGY

Climate-driven changes in functional biogeography of Arctic marine fish communities

(2017) André Frainer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Persistent and plastic effects of temperature on DNA methylation across the genome of threespine stickleback ( Gasterosteus aculeatus )

(2017) David C. H. Metzger et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Thermal conditions during early life influence seasonal maternal strategies in the three-spined stickleback

(2017) Sin-Yeon Kim et al.   BMC ECOLOGY

Comparison of normalization and differential expression analyses using RNA-Seq data from 726 individual Drosophila melanogaster

(2016) Yanzhu Lin et al.   BMC GENOMICS

Transgenerational effects persist down the maternal line in marine sticklebacks: gene expression matches physiology in a warming ocean

(2016) Lisa N.S. Shama et al.   Evolutionary Applications

How plasticity, genetic assimilation and cryptic genetic variation may contribute to adaptive radiations

(2016) Ralf F. Schneider et al.   MOLECULAR ECOLOGY

Evaluating ‘Plasticity-First’ Evolution in Nature: Key Criteria and Empirical Approaches

(2016) Nicholas A. Levis et al.   TRENDS IN ECOLOGY & EVOLUTION

Evolution of Plasticity: Mechanistic Link between Development and Reversible Acclimation

(2016) Julian E. Beaman et al.   TRENDS IN ECOLOGY & EVOLUTION

Population genomic evidence for adaptive differentiation in Baltic Sea three-spined sticklebacks

(2015) Baocheng Guo et al.   BMC BIOLOGY

What Do You Mean, “Epigenetic”?

(2015) Carrie Deans et al.   GENETICS

Thermal variation, thermal extremes and the physiological performance of individuals

(2015) W. W. Dowd et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Transcriptomic responses to environmental temperature in eurythermal and stenothermal fishes

(2015) C. A. Logan et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Key Questions on the Role of Phenotypic Plasticity in Eco-Evolutionary Dynamics

(2015) Andrew P. Hendry   JOURNAL OF HEREDITY

Genome-Wide DNA Methylation Patterns in Wild Samples of Two Morphotypes of Threespine Stickleback (Gasterosteus aculeatus)

(2015) Gilbert Smith et al.   MOLECULAR BIOLOGY AND EVOLUTION

Non-adaptive plasticity potentiates rapid adaptive evolution of gene expression in nature

(2015) Cameron K. Ghalambor et al.   NATURE

Constraints, independence, and evolution of thermal plasticity: Probing genetic architecture of long- and short-term thermal acclimation

(2015) Alison R. Gerken et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Molecular processes of transgenerational acclimation to a warming ocean

(2015) Heather D. Veilleux et al.   Nature Climate Change

How warm is too warm for the life cycle of actinopterygian fishes?

(2015) Ryosuke Motani et al.   Scientific Reports

What Do You Mean, “Epigenetic”?

(2015) Carrie Deans et al.   GENETICS

Dynamics and Reversibility of the DNA Methylation Landscape of Grapevine Plants (Vitis vinifera) Stressed by In Vitro Cultivation and Thermotherapy

(2015) Miroslav Baránek et al.   PLoS One

Transgenerational plasticity in marine sticklebacks: maternal effects mediate impacts of a warming ocean

(2014) Lisa N. S. Shama et al.   FUNCTIONAL ECOLOGY

Climate variability and vulnerability to climate change: a review

(2014) Philip K Thornton et al.   GLOBAL CHANGE BIOLOGY

Grandparental effects in marine sticklebacks: transgenerational plasticity across multiple generations

(2014) L. N. S. Shama et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Nonlinear effects of temperature on body form and developmental canalization in the threespine stickleback

(2014) D. Ramler et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Gene expression plasticity evolves in response to colonization of freshwater lakes in threespine stickleback

(2014) Matthew R. J. Morris et al.   MOLECULAR ECOLOGY

Towards a gene regulatory network perspective on phenotypic plasticity, genetic accommodation and genetic assimilation

(2014) David W. Pfennig et al.   MOLECULAR ECOLOGY

Regulatory gene networks that shape the development of adaptive phenotypic plasticity in a cichlid fish

(2014) Ralf F. Schneider et al.   MOLECULAR ECOLOGY

Physiological plasticity increases resilience of ectothermic animals to climate change

(2014) Frank Seebacher et al.   Nature Climate Change

Temperature during embryonic development has persistent effects on metabolic enzymes in the muscle of zebrafish

(2013) M. E. Schnurr et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Physiological mechanisms of seasonal and rapid cold-hardening in insects

(2013) NICHOLAS M. TEETS et al.   PHYSIOLOGICAL ENTOMOLOGY

Simulating climate change: temperature extremes but not means diminish performance in a widespread butterfly

(2013) Stephanie Sandra Bauerfeind et al.   POPULATION ECOLOGY

A comprehensive evaluation of normalization methods for Illumina high-throughput RNA sequencing data analysis

(2012) M.-A. Dillies et al.   BRIEFINGS IN BIOINFORMATICS

Effect of incubation temperature on growth performance in Atlantic salmon

(2012) AG Finstad et al.   MARINE ECOLOGY PROGRESS SERIES

The genomic basis of adaptive evolution in threespine sticklebacks

(2012) Felicity C. Jones et al.   NATURE

Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation

(2012) Davis J. McCarthy et al.   NUCLEIC ACIDS RESEARCH

Temperature during embryonic development has persistent effects on thermal acclimation capacity in zebrafish

(2012) G. R. Scott et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Thermal tolerance and the global redistribution of animals

(2012) Jennifer M. Sunday et al.   Nature Climate Change

A Genome-wide SNP Genotyping Array Reveals Patterns of Global and Repeated Species-Pair Divergence in Sticklebacks

(2011) Felicity C. Jones et al.   CURRENT BIOLOGY

Thermal legacies: transgenerational effects of temperature on growth in a vertebrate

(2011) Santiago Salinas et al.   ECOLOGY LETTERS

Comparing phenotypic effects and molecular correlates of developmental, gradual and rapid cold acclimation responses inDrosophila melanogaster

(2011) Hervé Colinet et al.   FUNCTIONAL ECOLOGY

A temperature-dependent growth model for the three-spined stickleback Gasterosteus aculeatus

(2011) R. Lefébure et al.   JOURNAL OF FISH BIOLOGY

The physiology of climate change: how potentials for acclimatization and genetic adaptation will determine 'winners' and 'losers'

(2010) G. N. Somero   JOURNAL OF EXPERIMENTAL BIOLOGY

Rapid evolution of cold tolerance in stickleback

(2010) R. D. H. Barrett et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Gene ontology analysis for RNA-seq: accounting for selection bias

(2010) Matthew D Young et al.   GENOME BIOLOGY

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Embryonic temperature affects muscle fibre recruitment in adult zebrafish: genome-wide changes in gene and microRNA expression associated with the transition from hyperplastic to hypertrophic growth phenotypes

(2009) I. A. Johnston et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Genomic reaction norms: using integrative biology to understand molecular mechanisms of phenotypic plasticity

(2009) NADIA AUBIN-HORTH et al.   MOLECULAR ECOLOGY

Hidden Reaction Norms, Cryptic Genetic Variation, and Evolvability

(2008) Carl D. Schlichting   Annals of the New York Academy of Sciences

Temperature until the 'eyed stage' of embryogenesis programmes the growth trajectory and muscle phenotype of adult Atlantic salmon

(2008) D. J. Macqueen et al.   Biology Letters