How plasticity, genetic assimilation and cryptic genetic variation may contribute to adaptive radiations

Developmental plasticity evolved according to specialist–generalist trade-offs in experimental populations ofDrosophila melanogaster

(2016) Jacqueline Le Vinh Thuy et al.   Biology Letters

High fitness costs of climate change-induced camouflage mismatch

(2016) Marketa Zimova et al.   ECOLOGY LETTERS

Developmental plasticity increases at the northern range margin in a warm-dependent amphibian

(2016) Germán Orizaola et al.   Evolutionary Applications

Foraging environment determines the genetic architecture and evolutionary potential of trophic morphology in cichlid fishes

(2016) Kevin J. Parsons et al.   MOLECULAR ECOLOGY

Shaped by the past, acting in the present: transgenerational plasticity of anti-predatory traits

(2016) Lynne E. Beaty et al.   OIKOS

Continental cichlid radiations: functional diversity reveals the role of changing ecological opportunity in the Neotropics

(2016) Jessica Hilary Arbour et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Evaluating ‘Plasticity-First’ Evolution in Nature: Key Criteria and Empirical Approaches

(2016) Nicholas A. Levis et al.   TRENDS IN ECOLOGY & EVOLUTION

Phenotypic Plasticity and Species Coexistence

(2016) Martin M. Turcotte et al.   TRENDS IN ECOLOGY & EVOLUTION

Chromatin remodelling and antisense-mediated up-regulation of the developmental switch gene eud-1 control predatory feeding plasticity

(2016) Vahan Serobyan et al.   Nature Communications

Iterative development and the scope for plasticity: contrasts among trait categories in an adaptive radiation

(2015) S A Foster et al.   HEREDITY

Constraints on the evolution of phenotypic plasticity: limits and costs of phenotype and plasticity

(2015) C J Murren et al.   HEREDITY

Does plasticity enhance or dampen phenotypic parallelism? A test with three lake-stream stickleback pairs

(2015) K. B. Oke et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Strong and parallel salinity-induced phenotypic plasticity in one generation of threespine stickleback

(2015) A. B. Mazzarella et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Key Questions on the Role of Phenotypic Plasticity in Eco-Evolutionary Dynamics

(2015) Andrew P. Hendry   JOURNAL OF HEREDITY

Non-adaptive plasticity potentiates rapid adaptive evolution of gene expression in nature

(2015) Cameron K. Ghalambor et al.   NATURE

Eco-Evo-Devo: developmental symbiosis and developmental plasticity as evolutionary agents

(2015) Scott F. Gilbert et al.   NATURE REVIEWS GENETICS

Evolution of transcription factor function as a mechanism for changing metazoan developmental gene regulatory networks

(2015) Alys M Cheatle Jarvela et al.   EvoDevo

Rapid diversification associated with a macroevolutionary pulse of developmental plasticity

(2015) Vladislav Susoy et al.   eLife

Shifting habitats, morphology, and selective pressures: Developmental polyphenism in an adaptive radiation of Hawaiian spiders

(2014) Michael S. Brewer et al.   EVOLUTION

PHENOTYPIC PLASTICITY AND EPIGENETIC MARKING: AN ASSESSMENT OF EVIDENCE FOR GENETIC ACCOMMODATION

(2014) Carl D. Schlichting et al.   EVOLUTION

Towards a gene regulatory network perspective on phenotypic plasticity, genetic accommodation and genetic assimilation

(2014) David W. Pfennig et al.   MOLECULAR ECOLOGY

Regulatory gene networks that shape the development of adaptive phenotypic plasticity in a cichlid fish

(2014) Ralf F. Schneider et al.   MOLECULAR ECOLOGY

The genomic substrate for adaptive radiation in African cichlid fish

(2014) David Brawand et al.   NATURE

Cryptic genetic variation: evolution's hidden substrate

(2014) Annalise B. Paaby et al.   NATURE REVIEWS GENETICS

Ecological opportunity and the adaptive diversification of lineages

(2014) Gary A. Wellborn et al.   Ecology and Evolution

Rapid Evolution of Phenotypic Plasticity and Shifting Thresholds of Genetic Assimilation in the Nematode Caenorhabditis remanei

(2014) Kristin L. Sikkink et al.   G3-Genes Genomes Genetics

Development and evolution of insect polyphenisms: novel insights through the study of sex determination mechanisms

(2014) Armin P Moczek et al.   Current Opinion in Insect Science

Genetic accommodation and behavioural evolution: insights from genomic studies

(2013) Suzy C.P. Renn et al.   ANIMAL BEHAVIOUR

Genetic and environmental factors affecting cryptic variations in gene regulatory networks

(2013) Watal M Iwasaki et al.   BMC EVOLUTIONARY BIOLOGY

A Developmental Switch Coupled to the Evolution of Plasticity Acts through a Sulfatase

(2013) Erik J. Ragsdale et al.   CELL

Feeding plasticity in the nematodePristionchus pacificusis influenced by sex and social context and is linked to developmental speed

(2013) Vahan Serobyan et al.   EVOLUTION & DEVELOPMENT

Adaptive plasticity and genetic divergence in feeding efficiency during parallel adaptive radiation of whitefish (Coregonusspp.)

(2013) B. Lundsgaard-Hansen et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Shaping development through mechanical strain: the transcriptional basis of diet-induced phenotypic plasticity in a cichlid fish

(2013) Helen M. Gunter et al.   MOLECULAR ECOLOGY

Convergent Evolution within an Adaptive Radiation of Cichlid Fishes

(2012) Moritz Muschick et al.   CURRENT BIOLOGY

PHENOTYPIC PLASTICITY FACILITATES MUTATIONAL VARIANCE, GENETIC VARIANCE, AND EVOLVABILITY ALONG THE MAJOR AXIS OF ENVIRONMENTAL VARIATION

(2012) Jeremy A. Draghi et al.   EVOLUTION

LOCAL ADAPTATION AND THE EVOLUTION OF PHENOTYPIC PLASTICITY IN TRINIDADIAN GUPPIES (POECILIA RETICULATA)

(2012) Julián Torres-Dowdall et al.   EVOLUTION

Relaxed Genetic Constraint is Ancestral to the Evolution of Phenotypic Plasticity

(2012) Aaron R. Leichty et al.   INTEGRATIVE AND COMPARATIVE BIOLOGY

Parsing parallel evolution: ecological divergence and differential gene expression in the adaptive radiations of thick-lipped Midas cichlid fishes from Nicaragua

(2012) Tereza Manousaki et al.   MOLECULAR ECOLOGY

The ecological and genetic basis of convergent thick-lipped phenotypes in cichlid fishes

(2012) Marco Colombo et al.   MOLECULAR ECOLOGY

Diet-Morphology Correlations in the Radiation of South American Geophagine Cichlids (Perciformes: Cichlidae: Cichlinae)

(2012) Hernán López-Fernández et al.   PLoS One

Diversification of doublesex function underlies morph-, sex-, and species-specific development of beetle horns

(2012) T. Kijimoto et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The genetics of phenotypic plasticity. X. Variation versus uncertainty

(2012) Samuel M. Scheiner et al.   Ecology and Evolution

Adaptive phenotypic plasticity in the Midas cichlid fish pharyngeal jaw and its relevance in adaptive radiation

(2011) Moritz Muschick et al.   BMC EVOLUTIONARY BIOLOGY

Evolution of Gene Regulatory Networks Controlling Body Plan Development

(2011) Isabelle S. Peter et al.   CELL

Epigenetic contribution to stress adaptation in plants

(2011) Marie Mirouze et al.   CURRENT OPINION IN PLANT BIOLOGY

Do invasive species show higher phenotypic plasticity than native species and, if so, is it adaptive? A meta-analysis

(2011) Amy Michelle Davidson et al.   ECOLOGY LETTERS

A history of phenotypic plasticity accelerates adaptation to a new environment

(2011) J. L. FIERST   JOURNAL OF EVOLUTIONARY BIOLOGY

Multilocus phylogeny of Crenicichla (Teleostei: Cichlidae), with biogeography of the C. lacustris group: Species flocks as a model for sympatric speciation in rivers

(2011) Lubomír Piálek et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Cryptic genetic variation promotes rapid evolutionary adaptation in an RNA enzyme

(2011) Eric J. Hayden et al.   NATURE

Relaxed selection is a precursor to the evolution of phenotypic plasticity

(2011) B. G. Hunt et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genes as leaders and followers in evolution

(2011) Tanja Schwander et al.   TRENDS IN ECOLOGY & EVOLUTION

Phylogeography, colonization and population history of the Midas cichlid species complex (Amphilophus spp.) in the Nicaraguan crater lakes

(2010) Marta Barluenga et al.   BMC EVOLUTIONARY BIOLOGY

The consequences of phenotypic plasticity for ecological speciation

(2010) X. THIBERT-PLANTE et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Parallel Evolution of Opsin Gene Expression in African Cichlid Fishes

(2010) K. E. O'Quin et al.   MOLECULAR BIOLOGY AND EVOLUTION

Co-option of the hormone-signalling module dafachronic acid–DAF-12 in nematode evolution

(2010) Gilberto Bento et al.   NATURE

Morphological distinctness despite large-scale phenotypic plasticity—analysis of wild and pond-bred juveniles of allopatric populations of Tropheus moorii

(2010) Michaela Kerschbaumer et al.   NATURWISSENSCHAFTEN

What can whole genome expression data tell us about the ecology and evolution of personality?

(2010) A. M. Bell et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The tale of the finch: adaptive radiation and behavioural flexibility

(2010) S. Tebbich et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Resource polyphenism increases species richness: a test of the hypothesis

(2010) D. W. Pfennig et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Local variation and parallel evolution: morphological and genetic diversity across a species complex of neotropical crater lake cichlid fishes

(2010) K. R. Elmer et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Phenotypic plasticity's impacts on diversification and speciation

(2010) David W. Pfennig et al.   TRENDS IN ECOLOGY & EVOLUTION

Plant phenotypic plasticity in a changing climate

(2010) A.B. Nicotra et al.   TRENDS IN PLANT SCIENCE

Adaptation, Plasticity, and Extinction in a Changing Environment: Towards a Predictive Theory

(2010) Luis-Miguel Chevin et al.   PLOS BIOLOGY

Evolution of gene regulatory network architectures: Examples of subcircuit conservation and plasticity between classes of echinoderms

(2009) Veronica F. Hinman et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Toward a population genetic framework of developmental evolution: the costs, limits, and consequences of phenotypic plasticity

(2009) Emilie C. Snell-Rood et al.   BIOESSAYS

Phenotypic novelty in experimental hybrids is predicted by the genetic distance between species of cichlid fish

(2009) Rike B Stelkens et al.   BMC EVOLUTIONARY BIOLOGY

EST and microarray analysis of horn development in Onthophagus beetles

(2009) Teiya Kijimoto et al.   BMC GENOMICS

Gene-expression signatures of Atlantic salmon’s plastic life cycle

(2009) Nadia Aubin-Horth et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Ecological studies on crater lakes in West Cameroon Fishes of Barombi Mbo

(2009) Ethelwynn Trewavas et al.   JOURNAL OF ZOOLOGY

Genomic reaction norms: using integrative biology to understand molecular mechanisms of phenotypic plasticity

(2009) NADIA AUBIN-HORTH et al.   MOLECULAR ECOLOGY

Deep homology and the origins of evolutionary novelty

(2009) Neil Shubin et al.   NATURE

Morphological Diversity and the Roles of Contingency, Chance and Determinism in African Cichlid Radiations

(2009) Kyle A. Young et al.   PLoS One

Pleistocene desiccation in East Africa bottlenecked but did not extirpate the adaptive radiation of Lake Victoria haplochromine cichlid fishes

(2009) K. R. Elmer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Temperature has a causal effect on avian timing of reproduction

(2009) M. E. Visser et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Relaxed selection in the wild

(2009) David C. Lahti et al.   TRENDS IN ECOLOGY & EVOLUTION

Adaptive radiation, nonadaptive radiation, ecological speciation and nonecological speciation

(2009) Rebecca J. Rundell et al.   TRENDS IN ECOLOGY & EVOLUTION

A Test of the “Flexible Stem” Model of Evolution: Ancestral Plasticity, Genetic Accommodation, and Morphological Divergence in the Threespine Stickleback Radiation

(2008) Matthew A. Wund et al.   AMERICAN NATURALIST

Does plasticity drive speciation? Host-plant shifts and diversification in nymphaline butterflies (Lepidoptera: Nymphalidae) during the tertiary

(2008) SÖREN NYLIN et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Evo-Devo and an Expanding Evolutionary Synthesis: A Genetic Theory of Morphological Evolution

(2008) Sean B. Carroll   CELL

The environmental contribution to gene expression profiles

(2008) Greg Gibson   NATURE REVIEWS GENETICS

Robustness and evolvability: a paradox resolved

(2007) A. Wagner   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Adaptation from standing genetic variation

(2007) R BARRETT et al.   TRENDS IN ECOLOGY & EVOLUTION

How many species of cichlid fishes are there in African lakes?

(2003) George F. Turner et al.   MOLECULAR ECOLOGY