Regulatory gene networks that shape the development of adaptive phenotypic plasticity in a cichlid fish

Molecular investigation of mechanical strain-induced phenotypic plasticity in the ecologically important pharyngeal jaws of cichlid fish

(2014) H. M. Gunter et al.   JOURNAL OF APPLIED ICHTHYOLOGY

Molecular Mechanisms of Phase Change in Locusts

(2013) Xianhui Wang et al.   Annual Review of Entomology

Forum on bone and skeletal muscle interactions: Summary of the proceedings of an ASBMR workshop

(2013) Lynda F Bonewald et al.   JOURNAL OF BONE AND MINERAL RESEARCH

Linking conceptual mechanisms and transcriptomic evidence of plasticity-driven diversification

(2013) Rebecca L. Young   MOLECULAR ECOLOGY

Shaping development through mechanical strain: the transcriptional basis of diet-induced phenotypic plasticity in a cichlid fish

(2013) Helen M. Gunter et al.   MOLECULAR ECOLOGY

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

(2013) Brian J Haas et al.   Nature Protocols

oPOSSUM-3: Advanced Analysis of Regulatory Motif Over-Representation Across Genes or ChIP-Seq Datasets

(2013) Andrew T. Kwon et al.   G3-Genes Genomes Genetics

Genetics of gene expression responses to temperature stress in a sea urchin gene network

(2012) DANIEL E. RUNCIE et al.   MOLECULAR ECOLOGY

Isoform Diversity and Regulation in Peripheral and Central Neurons Revealed through RNA-Seq

(2012) Jessica K. Lerch et al.   PLoS One

The Cobalamin-Binding Protein in Zebrafish Is an Intermediate between the Three Cobalamin-Binding Proteins in Human

(2012) Eva Greibe et al.   PLoS One

The genetics of phenotypic plasticity. X. Variation versus uncertainty

(2012) Samuel M. Scheiner et al.   Ecology and Evolution

Adaptive phenotypic plasticity in the Midas cichlid fish pharyngeal jaw and its relevance in adaptive radiation

(2011) Moritz Muschick et al.   BMC EVOLUTIONARY BIOLOGY

Hormone Signaling and Phenotypic Plasticity in Nematode Development and Evolution

(2011) Ralf J. Sommer et al.   CURRENT BIOLOGY

Krüppel-like factor 4 regulates membranous and endochondral ossification

(2011) Ikumi Michikami et al.   EXPERIMENTAL CELL RESEARCH

Type XII collagen regulates osteoblast polarity and communication during bone formation

(2011) Yayoi Izu et al.   JOURNAL OF CELL BIOLOGY

Evolution and molecular mechanisms of adaptive developmental plasticity

(2011) PATRÍCIA BELDADE et al.   MOLECULAR ECOLOGY

Genomic mechanisms of evolved physiological plasticity in killifish distributed along an environmental salinity gradient

(2011) A. Whitehead et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genes as leaders and followers in evolution

(2011) Tanja Schwander et al.   TRENDS IN ECOLOGY & EVOLUTION

Plasticity of the Reproductive Axis Caused by Social Status Change in an African Cichlid Fish: I. Pituitary Gonadotropins

(2010) Karen P. Maruska et al.   ENDOCRINOLOGY

Evolutionary analysis of two classical MHC class I loci of the medaka fish, Oryzias latipes: haplotype-specific genomic diversity, locus-specific polymorphisms, and interlocus homogenization

(2010) Mayumi I. Nonaka et al.   IMMUNOGENETICS

Gene expression patterns in bone following mechanical loading

(2010) Sara M Mantila Roosa et al.   JOURNAL OF BONE AND MINERAL RESEARCH

The consequences of phenotypic plasticity for ecological speciation

(2010) X. THIBERT-PLANTE et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

What can whole genome expression data tell us about the ecology and evolution of personality?

(2010) A. M. Bell et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Phenotypic plasticity facilitates recurrent rapid adaptation to introduced predators

(2010) A. G. Scoville et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Loss of Bright/ARID3a Function Promotes Developmental Plasticity

(2010) Guangyu An et al.   STEM CELLS

Phenotypic plasticity's impacts on diversification and speciation

(2010) David W. Pfennig et al.   TRENDS IN ECOLOGY & EVOLUTION

Plant phenotypic plasticity in a changing climate

(2010) A.B. Nicotra et al.   TRENDS IN PLANT SCIENCE

Toward a population genetic framework of developmental evolution: the costs, limits, and consequences of phenotypic plasticity

(2009) Emilie C. Snell-Rood et al.   BIOESSAYS

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Tracking gene expression during zebrafish osteoblast differentiation

(2009) Nan Li et al.   DEVELOPMENTAL DYNAMICS

Mechanical Loading Regulates NFATc1 and β-Catenin Signaling through a GSK3β Control Node

(2009) Buer Sen et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Promiscuous and Depolarization-Induced Immediate-Early Response Genes Are Induced by Mechanical Strain of Osteoblasts

(2009) Claus-Eric Ott et al.   JOURNAL OF BONE AND MINERAL RESEARCH

Genomic reaction norms: using integrative biology to understand molecular mechanisms of phenotypic plasticity

(2009) NADIA AUBIN-HORTH et al.   MOLECULAR ECOLOGY

Morphological Diversity and the Roles of Contingency, Chance and Determinism in African Cichlid Radiations

(2009) Kyle A. Young et al.   PLoS One

Pleistocene desiccation in East Africa bottlenecked but did not extirpate the adaptive radiation of Lake Victoria haplochromine cichlid fishes

(2009) K. R. Elmer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Transgenerational Epigenetic Inheritance: Prevalence, Mechanisms, and Implications for the Study of Heredity and Evolution

(2009) Eva Jablonka et al.   QUARTERLY REVIEW OF BIOLOGY

A Test of the “Flexible Stem” Model of Evolution: Ancestral Plasticity, Genetic Accommodation, and Morphological Divergence in the Threespine Stickleback Radiation

(2008) Matthew A. Wund et al.   AMERICAN NATURALIST

C1q-like inhibits p53-mediated apoptosis and controls normal hematopoiesis during zebrafish embryogenesis

(2008) Jie Mei et al.   DEVELOPMENTAL BIOLOGY

Calcium Regulation of Myogenesis by Differential Calmodulin Inhibition of Basic Helix-Loop-Helix Transcription Factors

(2008) Jannek Hauser et al.   MOLECULAR BIOLOGY OF THE CELL