Demography and rapid local adaptation shape Creole cattle genome diversity in the tropics

CD38 Expression in a Subset of Memory T Cells Is Independent of Cell Cycling as a Correlate of HIV Disease Progression

(2016) Daniela Würsch et al.   DISEASE MARKERS

Genetic origin, admixture and population history of aurochs (Bos primigenius) and primitive European cattle

(2016) M R Upadhyay et al.   HEREDITY

Association of SNPs in dopamine and serotonin pathway genes and their interacting genes with temperament traits in Charolais cows

(2016) E. Garza-Brenner et al.   JOURNAL OF APPLIED GENETICS

pophelper: an R package and web app to analyse and visualize population structure

(2016) R. M. Francis   Molecular Ecology Resources

Nuclear Export of Smads by RanBP3L Regulates Bone Morphogenetic Protein Signaling and Mesenchymal Stem Cell Differentiation

(2015) Fenfang Chen et al.   MOLECULAR AND CELLULAR BIOLOGY

Genetic variation in CD38 and breastfeeding experience interact to impact infants’ attention to social eye cues

(2015) Kathleen M. Krol et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Second-generation PLINK: rising to the challenge of larger and richer datasets

(2015) Christopher C Chang et al.   GigaScience

SNeP: a tool to estimate trends in recent effective population size trajectories using genome-wide SNP data

(2015) Mario Barbato et al.   Frontiers in Genetics

Selection for complex traits leaves little or no classic signatures of selection

(2014) Kathryn E Kemper et al.   BMC GENOMICS

DNA repair diseases: what do they tell us about cancer and aging?

(2014) Carlos FM Menck et al.   GENETICS AND MOLECULAR BIOLOGY

selscan: An Efficient Multithreaded Program to Perform EHH-Based Scans for Positive Selection

(2014) Z. A. Szpiech et al.   MOLECULAR BIOLOGY AND EVOLUTION

Demographic history of a recent invasion of house mice on the isolated Island of Gough

(2014) Melissa M. Gray et al.   MOLECULAR ECOLOGY

The Genetic Architecture of Climatic Adaptation of Tropical Cattle

(2014) Laercio R. Porto-Neto et al.   PLoS One

Worldwide Patterns of Ancestry, Divergence, and Admixture in Domesticated Cattle

(2014) Jared E. Decker et al.   PLoS Genetics

Genome-wide association study and ancestral origins of the slick-hair coat in tropically adapted cattle

(2014) Heather J. Huson et al.   Frontiers in Genetics

A bioinformatics workflow for detecting signatures of selection in genomic data

(2014) Murray Cadzow et al.   Frontiers in Genetics

Detecting Natural Selection in Genomic Data

(2013) Joseph J. Vitti et al.   Annual Review of Genetics

Inferring Demography from Runs of Homozygosity in Whole-Genome Sequence, with Correction for Sequence Errors

(2013) Iona M. MacLeod et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genome Wide Association Study (GWAS) of Chagas Cardiomyopathy in Trypanosoma cruzi Seropositive Subjects

(2013) Xutao Deng et al.   PLoS One

New World cattle show ancestry from multiple independent domestication events

(2013) E. J. McTavish et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Robust Demographic Inference from Genomic and SNP Data

(2013) Laurent Excoffier et al.   PLoS Genetics

A Quasi-Exclusive European Ancestry in the Senepol Tropical Cattle Breed Highlights the Importance of the slick Locus in Tropical Adaptation

(2012) Laurence Flori et al.   PLoS One

Bovine Polledness – An Autosomal Dominant Trait with Allelic Heterogeneity

(2012) Ivica Medugorac et al.   PLoS One

Genetic Footprints of Iberian Cattle in America 500 Years after the Arrival of Columbus

(2012) Amparo M. Martínez et al.   PLoS One

fastsimcoal: a continuous-time coalescent simulator of genomic diversity under arbitrarily complex evolutionary scenarios

(2011) Laurent Excoffier et al.   BIOINFORMATICS

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

Conservation genetics of cattle, sheep, and goats

(2011) Pierre Taberlet et al.   COMPTES RENDUS BIOLOGIES

ABCtoolbox: a versatile toolkit for approximate Bayesian computations

(2010) Daniel Wegmann et al.   BMC BIOINFORMATICS

Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows

(2010) LAURENT EXCOFFIER et al.   Molecular Ecology Resources

Insights into the Genetic History of French Cattle from Dense SNP Data on 47 Worldwide Breeds

(2010) Mathieu Gautier et al.   PLoS One

Inference of locus-specific ancestry in closely related populations

(2009) B. Pasaniuc et al.   BIOINFORMATICS

Fast model-based estimation of ancestry in unrelated individuals

(2009) D. H. Alexander et al.   GENOME RESEARCH

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

Resolving the evolution of extant and extinct ruminants with high-throughput phylogenomics

(2009) J. E. Decker et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome-Wide Survey of SNP Variation Uncovers the Genetic Structure of Cattle Breeds

(2009) et al.   SCIENCE

Expression patterns of the glial cell line–derived neurotrophic factor, neurturin, their cognate receptors GFRα-1, GFRα-2, and a common signal transduction element c-Ret in the human skin hair follicles

(2008) Mohamed A. Adly et al.   JOURNAL OF THE AMERICAN ACADEMY OF DERMATOLOGY