SNeP: a tool to estimate trends in recent effective population size trajectories using genome-wide SNP data

Genome-wide analysis reveals the ancient and recent admixture history of East African Shorthorn Zebu from Western Kenya

(2014) M N Mbole-Kariuki et al.   HEREDITY

Mixed signals from hybrid genomes

(2014) Pablo A. Orozco-terWengel et al.   MOLECULAR ECOLOGY

NeEstimatorv2: re-implementation of software for the estimation of contemporary effective population size (Ne) from genetic data

(2013) C. Do et al.   Molecular Ecology Resources

Estimating Effective Population Size from Linkage Disequilibrium between Unlinked Loci: Theory and Application to Fruit Fly Outbreak Populations

(2013) John A Sved et al.   PLoS One

Estimation of historical effective population size using linkage disequilibria with marker data

(2012) L.J. Corbin et al.   JOURNAL OF ANIMAL BREEDING AND GENETICS

Genome-Wide Analysis of the World's Sheep Breeds Reveals High Levels of Historic Mixture and Strong Recent Selection

(2012) James W. Kijas et al.   PLOS BIOLOGY

Human population dispersal "Out of Africa" estimated from linkage disequilibrium and allele frequencies of SNPs

(2011) B. P. McEvoy et al.   GENOME RESEARCH

Linkage disequilibrium and historical effective population size in the Thoroughbred horse

(2010) L. J. Corbin et al.   ANIMAL GENETICS

Effective population size of an indigenous Swiss cattle breed estimated from linkage disequilibrium

(2010) C. Flury et al.   JOURNAL OF ANIMAL BREEDING AND GENETICS

Extent of linkage disequilibrium and effective population size in Finnish Landrace and Finnish Yorkshire pig breeds1

(2010) P. Uimari et al.   JOURNAL OF ANIMAL SCIENCE

Linkage disequilibrium estimates of contemporaryNeusing highly variable genetic markers: a largely untapped resource for applied conservation and evolution

(2009) Robin S. Waples et al.   Evolutionary Applications

Divergence between Human Populations Estimated from Linkage Disequilibrium

(2008) John A. Sved et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Linkage Disequilibrium and Persistence of Phase in Holstein-Friesian, Jersey and Angus Cattle

(2008) A. P. W. de Roos et al.   GENETICS

ldne: a program for estimating effective population size from data on linkage disequilibrium

(2008) ROBIN S. WAPLES et al.   Molecular Ecology Resources